RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 PLA2G4DQ86XP0 818 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 USP28Q96RU2 1077 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 BIN1O00499 593 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 ELP1O95163 1332 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 LRRC37A3O60309 1634 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 GOLIM4O00461 696 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 ME1P48163 572 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 TIMM10P62072 90 aa16.17■□□□□ 0.18
COL6A2-203ENST00000397763 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 HIP1O00291 1037 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 DDX58O95786 925 aaKnown RBP16.16■□□□□ 0.18
COL6A2-203ENST00000397763 TTLL5Q6EMB2 1281 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 CCDC112Q8NEF3 446 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 TPM3P06753 285 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 HOXB7P09629 217 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 GCKRQ14397 625 aa16.16■□□□□ 0.18
COL6A2-203ENST00000397763 ERICH4A6NGS2 130 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 GCP02774 474 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 TDRD7Q8NHU6 1098 aaKnown RBP16.15■□□□□ 0.18
COL6A2-203ENST00000397763 MED23Q9ULK4 1368 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 POLR3DP05423 398 aaPredicted RBP16.15■□□□□ 0.18
COL6A2-203ENST00000397763 SKILP12757 684 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 HAND2P61296 217 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 TNNI3KQ59H18 835 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 AOPEPQ8N6M6 819 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 ANKRD7Q92527 254 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
COL6A2-203ENST00000397763 DDX21Q9NR30 783 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL6A2-203ENST00000397763 FPGT-TNNI3KV9GXZ4 949 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 CACNA1FO60840 1977 aa16.15■□□□□ 0.18
COL6A2-203ENST00000397763 A0A1B0GVL5 298 aa16.14■□□□□ 0.18
COL6A2-203ENST00000397763 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.18
COL6A2-203ENST00000397763 CEP135Q66GS9 1140 aa16.14■□□□□ 0.17
COL6A2-203ENST00000397763 ZNF496Q96IT1 587 aaPredicted RBP16.14■□□□□ 0.17
COL6A2-203ENST00000397763 ZNF609O15014 1411 aa16.14■□□□□ 0.17
COL6A2-203ENST00000397763 CTDNEP1O95476 244 aa16.14■□□□□ 0.17
COL6A2-203ENST00000397763 FSIP1Q8NA03 581 aa16.14■□□□□ 0.17
COL6A2-203ENST00000397763 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
COL6A2-203ENST00000397763 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
COL6A2-203ENST00000397763 CTIFO43310 598 aaKnown RBP16.13■□□□□ 0.17
COL6A2-203ENST00000397763 PTPN12Q05209 780 aaKnown RBP16.13■□□□□ 0.17
COL6A2-203ENST00000397763 PDE4CQ08493 712 aa16.13■□□□□ 0.17
COL6A2-203ENST00000397763 IQCB1Q15051 598 aa16.13■□□□□ 0.17
COL6A2-203ENST00000397763 LRRC8AQ8IWT6 810 aa16.13■□□□□ 0.17
COL6A2-203ENST00000397763 ZNF215Q9UL58 517 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-203ENST00000397763 A0A087WZG4 1122 aa16.13■□□□□ 0.17
COL6A2-203ENST00000397763 CCDC69A6NI79 296 aa16.13■□□□□ 0.17
COL6A2-203ENST00000397763 VGLL3A8MV65 326 aa16.13■□□□□ 0.17
COL6A2-203ENST00000397763 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
COL6A2-203ENST00000397763 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
COL6A2-203ENST00000397763 SDF4Q9BRK5 362 aa16.12■□□□□ 0.17
COL6A2-203ENST00000397763 ADD1P35611 737 aaKnown RBP16.12■□□□□ 0.17
COL6A2-203ENST00000397763 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
COL6A2-203ENST00000397763 CCDC73Q6ZRK6 1079 aa16.12■□□□□ 0.17
COL6A2-203ENST00000397763 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
COL6A2-203ENST00000397763 KINO60870 393 aaKnown RBP16.12■□□□□ 0.17
COL6A2-203ENST00000397763 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
COL6A2-203ENST00000397763 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
COL6A2-203ENST00000397763 THEMISQ8N1K5 641 aaPredicted RBP16.12■□□□□ 0.17
COL6A2-203ENST00000397763 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
COL6A2-203ENST00000397763 ZBTB9Q96C00 473 aa16.12■□□□□ 0.17
COL6A2-203ENST00000397763 SMTNL1A8MU46 457 aa16.11■□□□□ 0.17
COL6A2-203ENST00000397763 MCMDC2Q4G0Z9 681 aa16.11■□□□□ 0.17
COL6A2-203ENST00000397763 OGFRQ9NZT2 677 aa16.11■□□□□ 0.17
COL6A2-203ENST00000397763 ST7Q9NRC1 585 aa16.11■□□□□ 0.17
COL6A2-203ENST00000397763 CFAP45Q9UL16 551 aa16.11■□□□□ 0.17
COL6A2-203ENST00000397763 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 HMG20BQ9P0W2 317 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
COL6A2-203ENST00000397763 SNW1Q13573 536 aaKnown RBP16.1■□□□□ 0.17
COL6A2-203ENST00000397763 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 RBM43Q6ZSC3 357 aaKnown RBP16.1■□□□□ 0.17
COL6A2-203ENST00000397763 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 ELF2Q15723 593 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 LRRN4CLQ8ND94 238 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 CTNNA3Q9UI47 895 aa16.1■□□□□ 0.17
COL6A2-203ENST00000397763 SMC2O95347 1197 aa16.09■□□□□ 0.17
COL6A2-203ENST00000397763 ATP5JP18859 108 aa16.09■□□□□ 0.17
COL6A2-203ENST00000397763 HSP90AA4PQ58FG1 418 aa16.09■□□□□ 0.17
COL6A2-203ENST00000397763 DHX40Q8IX18 779 aaKnown RBP16.09■□□□□ 0.17
COL6A2-203ENST00000397763 ILDR1Q86SU0 546 aaPredicted RBP16.09■□□□□ 0.17
COL6A2-203ENST00000397763 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.17
COL6A2-203ENST00000397763 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.17
COL6A2-203ENST00000397763 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.17
COL6A2-203ENST00000397763 KRT32Q14532 448 aa16.08■□□□□ 0.17
COL6A2-203ENST00000397763 STX1AQ16623 288 aa16.08■□□□□ 0.17
COL6A2-203ENST00000397763 DPCR1Q3MIW9 517 aa16.08■□□□□ 0.17
COL6A2-203ENST00000397763 FEZ1Q99689 392 aa16.08■□□□□ 0.17
COL6A2-203ENST00000397763 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.17
COL6A2-203ENST00000397763 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.17
COL6A2-203ENST00000397763 RFX5P48382 616 aaPredicted RBP16.08■□□□□ 0.16
COL6A2-203ENST00000397763 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
COL6A2-203ENST00000397763 CABLES1Q8TDN4 633 aa16.08■□□□□ 0.16
COL6A2-203ENST00000397763 CLIC4Q9Y696 253 aa16.08■□□□□ 0.16
COL6A2-203ENST00000397763 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms