RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 CCDC194A0A1B0GVG4 234 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 MCM5P33992 734 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 TCEANC2Q96MN5 208 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 DBNDD2Q9BQY9 259 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 PRM3Q9NNZ6 103 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 HMG20BQ9P0W2 317 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 TTC41PQ6P2S7 1318 aa17.98■□□□□ 0.47
LSS-202ENST00000397728 NEURL1BA8MQ27 555 aa17.97■□□□□ 0.47
LSS-202ENST00000397728 WTAPQ15007 396 aa17.97■□□□□ 0.47
LSS-202ENST00000397728 MPNDQ8N594 471 aa17.97■□□□□ 0.47
LSS-202ENST00000397728 IARSP41252 1262 aaKnown RBP17.97■□□□□ 0.47
LSS-202ENST00000397728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.97■□□□□ 0.47
LSS-202ENST00000397728 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
LSS-202ENST00000397728 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
LSS-202ENST00000397728 NMIQ13287 307 aaPredicted RBP17.97■□□□□ 0.47
LSS-202ENST00000397728 PIGBQ92521 554 aa17.97■□□□□ 0.47
LSS-202ENST00000397728 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
LSS-202ENST00000397728 NFKBIBQ15653 356 aa17.96■□□□□ 0.47
LSS-202ENST00000397728 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
LSS-202ENST00000397728 KRT23Q9C075 422 aa17.96■□□□□ 0.47
LSS-202ENST00000397728 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
LSS-202ENST00000397728 PPIP5K2O43314 1243 aa17.96■□□□□ 0.47
LSS-202ENST00000397728 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
LSS-202ENST00000397728 METAP2P50579 478 aaKnown RBP eCLIP17.96■□□□□ 0.47
LSS-202ENST00000397728 BRF1Q92994 677 aa17.96■□□□□ 0.47
LSS-202ENST00000397728 XAGE2Q96GT9 111 aa17.96■□□□□ 0.47
LSS-202ENST00000397728 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 HMGN5P82970 282 aaKnown RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 TRMT1LQ7Z2T5 733 aaKnown RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 TNNI2P48788 182 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 TNNI3KQ59H18 835 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 NIM1KQ8IY84 436 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 TEX11Q8IYF3 940 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 FPGT-TNNI3KV9GXZ4 949 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 ERBB4Q15303 1308 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 ECM2O94769 699 aaPredicted RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 GSE1Q14687 1217 aa17.95■□□□□ 0.46
LSS-202ENST00000397728 CLTCQ00610 1675 aaKnown RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 BRPF1P55201 1214 aaPredicted RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 IFIT1BQ5T764 474 aaKnown RBP17.95■□□□□ 0.46
LSS-202ENST00000397728 KIF24Q5T7B8 1368 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 JCADQ9P266 1359 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 DHX8Q14562 1220 aaKnown RBP17.94■□□□□ 0.46
LSS-202ENST00000397728 CT47A1Q5JQC4 288 aaPredicted RBP17.94■□□□□ 0.46
LSS-202ENST00000397728 MAGEC2Q9UBF1 373 aaPredicted RBP17.94■□□□□ 0.46
LSS-202ENST00000397728 CEP131Q9UPN4 1083 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 MAP3K15Q6ZN16 1313 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 KLF18A0A0U1RQI7 1052 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 CNNM2Q9H8M5 875 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 GNAT2P19087 354 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 LPIN2Q92539 896 aa17.94■□□□□ 0.46
LSS-202ENST00000397728 TNS3Q68CZ2 1445 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 TRAK2O60296 914 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 STIM1Q13586 685 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 SCLT1Q96NL6 688 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 ORC3Q9UBD5 711 aaPredicted RBP17.93■□□□□ 0.46
LSS-202ENST00000397728 PDILTQ8N807 584 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 SLC26A6Q9BXS9 759 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 MBD4O95243 580 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 CTSWP56202 376 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 PROSER3Q2NL68 480 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 CCDC12Q8WUD4 166 aaPredicted RBP17.93■□□□□ 0.46
LSS-202ENST00000397728 ESYT1Q9BSJ8 1104 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
LSS-202ENST00000397728 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
LSS-202ENST00000397728 CCAR2Q8N163 923 aaKnown RBP17.93■□□□□ 0.46
LSS-202ENST00000397728 PDIA4P13667 645 aaKnown RBP17.92■□□□□ 0.46
LSS-202ENST00000397728 ARHGAP27Q6ZUM4 889 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 CYP27B1O15528 508 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 GJD4Q96KN9 370 aaPredicted RBP17.92■□□□□ 0.46
LSS-202ENST00000397728 PLEKHF1Q96S99 279 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 CEP152O94986 1710 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 TTC6Q86TZ1 520 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
LSS-202ENST00000397728 NAP1L1P55209 391 aaKnown RBP17.91■□□□□ 0.46
LSS-202ENST00000397728 EHMT1Q9H9B1 1298 aa17.91■□□□□ 0.46
LSS-202ENST00000397728 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
LSS-202ENST00000397728 ZBTB43O43298 467 aa17.91■□□□□ 0.46
LSS-202ENST00000397728 SAP30BPQ9UHR5 308 aaKnown RBP17.91■□□□□ 0.46
LSS-202ENST00000397728 UNC13BO14795 1591 aa17.91■□□□□ 0.46
LSS-202ENST00000397728 PPP4R3BQ5MIZ7 849 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 CEP57L1Q8IYX8 460 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 CNKSR1Q969H4 720 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 MATR3P43243 847 aaKnown RBP eCLIP17.9■□□□□ 0.465e-7■■■□□ 16.8
LSS-202ENST00000397728 CCDC178Q5BJE1 867 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 GIGYF2Q6Y7W6 1299 aaKnown RBP17.9■□□□□ 0.46
LSS-202ENST00000397728 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 TMTC2Q8N394 836 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 SERPINB2P05120 415 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 FILIP1LQ4L180 1135 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 MROH5Q6ZUA9 1318 aa17.9■□□□□ 0.46
LSS-202ENST00000397728 SMC5Q8IY18 1101 aa17.89■□□□□ 0.46
LSS-202ENST00000397728 C1orf167Q5SNV9 1468 aa17.89■□□□□ 0.46
LSS-202ENST00000397728 RAB34Q9BZG1 259 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 992.2 ms