RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TTC41PQ6P2S7 1318 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 KAT6BQ8WYB5 2073 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 SRCAPQ6ZRS2 3230 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 NEURL1BA8MQ27 555 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 CTR9Q6PD62 1173 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 LARP1Q6PKG0 1096 aaKnown RBP5.91□□□□□ -1.46
SSR1-202ENST00000397511 BLOC1S2Q6QNY1 142 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 RAB11FIP4Q86YS3 637 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 ZNF397Q8NF99 534 aaPredicted RBP5.91□□□□□ -1.46
SSR1-202ENST00000397511 ZNF594Q96JF6 807 aaPredicted RBP5.91□□□□□ -1.46
SSR1-202ENST00000397511 DBNDD2Q9BQY9 259 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 ZBTB3Q9H5J0 574 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 DDX21Q9NR30 783 aaKnown RBP eCLIP5.91□□□□□ -1.46
SSR1-202ENST00000397511 DBNLQ9UJU6 430 aaKnown RBP5.91□□□□□ -1.46
SSR1-202ENST00000397511 MTMR6Q9Y217 621 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 ARHGAP23Q9P227 1491 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 ZNF142P52746 1687 aaPredicted RBP5.9□□□□□ -1.46
SSR1-202ENST00000397511 GOLGA6L4A6NEF3 574 aa5.9□□□□□ -1.46
SSR1-202ENST00000397511 CCT2P78371 535 aaKnown RBP5.9□□□□□ -1.46
SSR1-202ENST00000397511 GUCY1B3Q02153 619 aa5.9□□□□□ -1.46
SSR1-202ENST00000397511 GCKRQ14397 625 aa5.9□□□□□ -1.46
SSR1-202ENST00000397511 CCDC112Q8NEF3 446 aa5.9□□□□□ -1.46
SSR1-202ENST00000397511 PAXBP1Q9Y5B6 917 aa5.9□□□□□ -1.46
SSR1-202ENST00000397511 LIG1P18858 919 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 UBE2HP62256 183 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 CCDC183Q5T5S1 534 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 VPS53Q5VIR6 699 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 LMBR1LQ6UX01 489 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 TTC6Q86TZ1 520 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 TICAM2Q86XR7 235 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 ERCC4Q92889 916 aaPredicted RBP5.9□□□□□ -1.47
SSR1-202ENST00000397511 FTOQ9C0B1 505 aaKnown RBP eCLIP5.9□□□□□ -1.476e-16■□□□□ 10.2
SSR1-202ENST00000397511 RASSF4Q9H2L5 321 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 ZSWIM6Q9HCJ5 1215 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 SNRKQ9NRH2 765 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 BABAM1Q9NWV8 329 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 PYCARDQ9ULZ3 195 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 ADAMTSL3P82987 1691 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 ERBB3P21860 1342 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 AOX1Q06278 1338 aa5.9□□□□□ -1.47
SSR1-202ENST00000397511 A0A0G2JS52 829 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 GOLIM4O00461 696 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 AP5Z1O43299 807 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 ALDH1L1O75891 902 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 GTF2A1P52655 376 aaPredicted RBP5.89□□□□□ -1.47
SSR1-202ENST00000397511 HNRNPH2P55795 449 aaKnown RBP5.89□□□□□ -1.47
SSR1-202ENST00000397511 ERC1Q8IUD2 1116 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 MAP4K1Q92918 833 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 NOL10Q9BSC4 688 aaKnown RBP5.89□□□□□ -1.47
SSR1-202ENST00000397511 SLC52A2Q9HAB3 445 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 RSPH14Q9UHP6 348 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 MARF1Q9Y4F3 1742 aaKnown RBP5.89□□□□□ -1.47
SSR1-202ENST00000397511 HOXB7P09629 217 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 TATP17735 454 aaPredicted RBP5.89□□□□□ -1.47
SSR1-202ENST00000397511 CYP2C19P33261 490 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 CABP4P57796 275 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 RAD51AP2Q09MP3 1159 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 LUZP1Q86V48 1076 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 BRF1Q92994 677 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 ZBTB9Q96C00 473 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 ANKARQ7Z5J8 1434 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 NPHP3Q7Z494 1330 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 TUBGCP6Q96RT7 1819 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 LRRC37A3O60309 1634 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 CYP27B1O15528 508 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 A1BGP04217 495 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 PHKG2P15735 406 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 PSEN1P49768 467 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 FKBP4Q02790 459 aaKnown RBP eCLIP5.89□□□□□ -1.47
SSR1-202ENST00000397511 MTX1Q13505 466 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 TTLL7Q6ZT98 887 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 Q6ZUG5 572 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 DRC7Q8IY82 874 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 BICD2Q8TD16 824 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 ZNF622Q969S3 477 aaKnown RBP eCLIP5.89□□□□□ -1.471e-9■■■□□ 15.3
SSR1-202ENST00000397511 NCOA5Q9HCD5 579 aaKnown RBP5.89□□□□□ -1.47
SSR1-202ENST00000397511 DACT1Q9NYF0 836 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 ATP6V1DQ9Y5K8 247 aa5.89□□□□□ -1.47
SSR1-202ENST00000397511 H3BQV1 296 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 HAND2P61296 217 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 PTPN12Q05209 780 aaKnown RBP5.88□□□□□ -1.47
SSR1-202ENST00000397511 TOB2Q14106 344 aaPredicted RBP5.88□□□□□ -1.47
SSR1-202ENST00000397511 TNNI3KQ59H18 835 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 IFFO2Q5TF58 517 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 SPATA32Q96LK8 384 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 KCNF1Q9H3M0 494 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 STRN4Q9NRL3 753 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 FPGT-TNNI3KV9GXZ4 949 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 PXDNLA1KZ92 1463 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 CACNA1FO60840 1977 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 COL15A1P39059 1388 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 TAF5LO75529 589 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 CYP21A2P08686 494 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 TNNT1P13805 278 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 KRT85P78386 507 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 LRRC24Q50LG9 513 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 TEX35Q5T0J7 233 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 RNF20Q5VTR2 975 aa5.88□□□□□ -1.47
SSR1-202ENST00000397511 METTL22Q9BUU2 404 aaPredicted RBP5.88□□□□□ -1.47
SSR1-202ENST00000397511 FAM53CQ9NYF3 392 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms