RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 ZSCAN31Q96LW9 406 aaPredicted RBP12□□□□□ -0.49
FGFR1-209ENST00000397113 CHGBP05060 677 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
FGFR1-209ENST00000397113 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
FGFR1-209ENST00000397113 PSMA5P28066 241 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 UBXN4Q92575 508 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
FGFR1-209ENST00000397113 DDX19AQ9NUU7 478 aaKnown RBP11.99□□□□□ -0.49
FGFR1-209ENST00000397113 LMOD1P29536 600 aaPredicted RBP11.99□□□□□ -0.49
FGFR1-209ENST00000397113 OTUD7BQ6GQQ9 843 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 SLC26A8Q96RN1 970 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 ECHDC1Q9NTX5 307 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 DDX41Q9UJV9 622 aaKnown RBP11.99□□□□□ -0.49
FGFR1-209ENST00000397113 C5P01031 1676 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 KDRP35968 1356 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 SLU7O95391 586 aaKnown RBP11.99□□□□□ -0.49
FGFR1-209ENST00000397113 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
FGFR1-209ENST00000397113 LRRC8AQ8IWT6 810 aa11.99□□□□□ -0.49
FGFR1-209ENST00000397113 NCOA5Q9HCD5 579 aaKnown RBP11.99□□□□□ -0.49
FGFR1-209ENST00000397113 A0A1B0GVL5 298 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
FGFR1-209ENST00000397113 GYS2P54840 703 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 TERF2Q15554 542 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 TTC14Q96N46 770 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 ZCCHC17Q9NP64 241 aaKnown RBP11.98□□□□□ -0.49
FGFR1-209ENST00000397113 NPHP3Q7Z494 1330 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 TEX35Q5T0J7 233 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 SEC31AO94979 1220 aaKnown RBP11.98□□□□□ -0.49
FGFR1-209ENST00000397113 SFPQP23246 707 aaKnown RBP eCLIP11.98□□□□□ -0.49
FGFR1-209ENST00000397113 VPS53Q5VIR6 699 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 PI4K2BQ8TCG2 481 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 FUCA2Q9BTY2 467 aa11.98□□□□□ -0.49
FGFR1-209ENST00000397113 LTKP29376 864 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
FGFR1-209ENST00000397113 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 IFNKQ9P0W0 207 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
FGFR1-209ENST00000397113 GNAT3A8MTJ3 354 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
FGFR1-209ENST00000397113 CEP57L1Q8IYX8 460 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 LRRN4CLQ8ND94 238 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 EYA1Q99502 592 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 TMEM51Q9NW97 253 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 ACEP12821 1306 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 SLFN14P0C7P3 912 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 MYL6BP14649 208 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 TMCO3Q6UWJ1 677 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 PGBD1Q96JS3 809 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 SEC62Q99442 399 aaKnown RBP11.97□□□□□ -0.49
FGFR1-209ENST00000397113 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
FGFR1-209ENST00000397113 A0A0D9SFI3 127 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 KCNQ3O43525 872 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 SERPINC1P01008 464 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 Q6ZUG5 572 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 C10orf67Q8IYJ2 551 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 TMEM87AQ8NBN3 555 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 CLSTN2Q9H4D0 955 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 TLR7Q9NYK1 1049 aaKnown RBP11.96□□□□□ -0.49
FGFR1-209ENST00000397113 CCDC171Q6TFL3 1326 aa11.96□□□□□ -0.49
FGFR1-209ENST00000397113 SLC27A2O14975 620 aa11.96□□□□□ -0.5
FGFR1-209ENST00000397113 CTIFO43310 598 aaKnown RBP11.96□□□□□ -0.5
FGFR1-209ENST00000397113 MPRIPQ6WCQ1 1025 aa11.96□□□□□ -0.5
FGFR1-209ENST00000397113 DNAAF4Q8WXU2 420 aa11.96□□□□□ -0.5
FGFR1-209ENST00000397113 SLFNL1Q499Z3 407 aa11.96□□□□□ -0.5
FGFR1-209ENST00000397113 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.5
FGFR1-209ENST00000397113 ATP2B1P20020 1258 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 GABPB1Q06547 395 aaPredicted RBP11.95□□□□□ -0.5
FGFR1-209ENST00000397113 STK38Q15208 465 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 CFAP100Q494V2 611 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 DDX46Q7L014 1031 aaKnown RBP11.95□□□□□ -0.5
FGFR1-209ENST00000397113 ZNF330Q9Y3S2 320 aaPredicted RBP11.95□□□□□ -0.5
FGFR1-209ENST00000397113 HSP90AB4PQ58FF6 505 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 TAF3Q5VWG9 929 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 STX1AQ16623 288 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 ARGLU1Q9NWB6 273 aaPredicted RBP11.95□□□□□ -0.5
FGFR1-209ENST00000397113 CALCOCO1Q9P1Z2 691 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
FGFR1-209ENST00000397113 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
FGFR1-209ENST00000397113 LMAN1P49257 510 aa11.94□□□□□ -0.5
FGFR1-209ENST00000397113 ST3GAL1Q11201 340 aa11.94□□□□□ -0.5
FGFR1-209ENST00000397113 BMS1Q14692 1282 aaKnown RBP11.94□□□□□ -0.5
FGFR1-209ENST00000397113 ZNF589Q86UQ0 364 aaPredicted RBP11.94□□□□□ -0.5
FGFR1-209ENST00000397113 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
FGFR1-209ENST00000397113 PRR36Q9H6K5 1346 aa11.94□□□□□ -0.5
FGFR1-209ENST00000397113 PHACTR2O75167 634 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 HNRNPH2P55795 449 aaKnown RBP11.93□□□□□ -0.5
FGFR1-209ENST00000397113 DHX37Q8IY37 1157 aaKnown RBP11.93□□□□□ -0.5
FGFR1-209ENST00000397113 CARD6Q9BX69 1037 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 TOGARAM1Q9Y4F4 1720 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 TTC21BQ7Z4L5 1316 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 ANKRD65E5RJM6 399 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 MARCKSP29966 332 aaPredicted RBP11.93□□□□□ -0.5
FGFR1-209ENST00000397113 HAND2P61296 217 aa11.93□□□□□ -0.5
FGFR1-209ENST00000397113 TPM4P67936 248 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms