RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 C8orf58Q8NAV2 365 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.65■□□□□ 0.74
SIN3A-203ENST00000394949 TUBB2BQ9BVA1 445 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 UBA7P41226 1012 aa19.65■□□□□ 0.74
SIN3A-203ENST00000394949 DNA2P51530 1060 aa19.64■□□□□ 0.74
SIN3A-203ENST00000394949 CCDC82Q8N4S0 544 aa19.64■□□□□ 0.74
SIN3A-203ENST00000394949 PAF1Q8N7H5 531 aa19.64■□□□□ 0.74
SIN3A-203ENST00000394949 LRRC27Q9C0I9 530 aa19.64■□□□□ 0.74
SIN3A-203ENST00000394949 VPS18Q9P253 973 aa19.64■□□□□ 0.74
SIN3A-203ENST00000394949 MCMDC2Q4G0Z9 681 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 Q6ZUG5 572 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 MICU3Q86XE3 530 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 CALML4Q96GE6 196 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 ANKIB1Q9P2G1 1089 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 TTC21AQ8NDW8 1320 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 TACC1O75410 805 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 ZNF444Q8N0Y2 327 aaPredicted RBP19.64■□□□□ 0.73
SIN3A-203ENST00000394949 LMBRD1Q9NUN5 540 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 ADAMTS2O95450 1211 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 TRIM47Q96LD4 638 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 ALG1Q9BT22 464 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 ZBTB3Q9H5J0 574 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 CWC25Q9NXE8 425 aaPredicted RBP19.64■□□□□ 0.73
SIN3A-203ENST00000394949 IFNKQ9P0W0 207 aa19.64■□□□□ 0.73
SIN3A-203ENST00000394949 TMCO5BA8MYB1 307 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 KRT86O43790 486 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
SIN3A-203ENST00000394949 DESP17661 470 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 LDHAL6AQ6ZMR3 332 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 RUFY3Q7L099 469 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 BRAPQ7Z569 592 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 CDC5LQ99459 802 aaKnown RBP19.63■□□□□ 0.73
SIN3A-203ENST00000394949 SLC26A6Q9BXS9 759 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 ZBTB7BO15156 539 aaPredicted RBP19.63■□□□□ 0.73
SIN3A-203ENST00000394949 ARFGAP2Q8N6H7 521 aa19.63■□□□□ 0.73
SIN3A-203ENST00000394949 NSRP1Q9H0G5 558 aaKnown RBP19.63■□□□□ 0.73
SIN3A-203ENST00000394949 MPHOSPH10O00566 681 aaKnown RBP19.62■□□□□ 0.73
SIN3A-203ENST00000394949 KIF5BP33176 963 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 MATR3P43243 847 aaKnown RBP eCLIP19.62■□□□□ 0.73
SIN3A-203ENST00000394949 CCDC40Q4G0X9 1142 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 COL17A1Q9UMD9 1497 aaPredicted RBP19.62■□□□□ 0.73
SIN3A-203ENST00000394949 IGSF3O75054 1194 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 LDHCP07864 332 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
SIN3A-203ENST00000394949 TMTC2Q8N394 836 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 NGLY1Q96IV0 654 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
SIN3A-203ENST00000394949 RRAGBQ5VZM2 374 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 FBXO3Q9UK99 471 aa19.62■□□□□ 0.73
SIN3A-203ENST00000394949 A0A1B0GUL7 405 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 KRI1Q8N9T8 703 aaKnown RBP19.61■□□□□ 0.73
SIN3A-203ENST00000394949 TNRQ92752 1358 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 EVCP57679 992 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 TNIP1Q15025 636 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 CREB3L3Q68CJ9 461 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 OTUD6BQ8N6M0 293 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 ZFP91Q96JP5 570 aaPredicted RBP19.61■□□□□ 0.73
SIN3A-203ENST00000394949 TCEANC2Q96MN5 208 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
SIN3A-203ENST00000394949 ZBTB43O43298 467 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 KDM5BQ9UGL1 1544 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 UHRF1BP1Q6BDS2 1440 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 FAM160A1Q05DH4 1040 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
SIN3A-203ENST00000394949 CCDC96Q2M329 555 aa19.6■□□□□ 0.73
SIN3A-203ENST00000394949 CCDC155Q8N6L0 562 aa19.6■□□□□ 0.73
SIN3A-203ENST00000394949 MFSD6Q6ZSS7 791 aa19.6■□□□□ 0.73
SIN3A-203ENST00000394949 GPTP24298 496 aa19.6■□□□□ 0.73
SIN3A-203ENST00000394949 ATRIPQ8WXE1 791 aa19.6■□□□□ 0.73
SIN3A-203ENST00000394949 IMPACTQ9P2X3 320 aa19.6■□□□□ 0.73
SIN3A-203ENST00000394949 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
SIN3A-203ENST00000394949 U2AF2P26368 475 aaKnown RBP eCLIP19.59■□□□□ 0.733e-6■■■■□ 23.8
SIN3A-203ENST00000394949 SSR1P43307 286 aaKnown RBP19.59■□□□□ 0.73
SIN3A-203ENST00000394949 NOP2P46087 812 aaKnown RBP19.59■□□□□ 0.73
SIN3A-203ENST00000394949 HAND2P61296 217 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 C10orf67Q8IYJ2 551 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 GTF3C6Q969F1 213 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
SIN3A-203ENST00000394949 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
SIN3A-203ENST00000394949 ZNF75DP51815 510 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 MYL5Q02045 173 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 DDX12PQ92771 950 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 RPGRQ92834 1020 aaKnown RBP19.59■□□□□ 0.73
SIN3A-203ENST00000394949 CLSTN2Q9H4D0 955 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 NBPF7P0C2Y1 421 aaPredicted RBP19.59■□□□□ 0.73
SIN3A-203ENST00000394949 CETN1Q12798 172 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 KIF5AQ12840 1032 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 NMIQ13287 307 aaPredicted RBP19.59■□□□□ 0.73
SIN3A-203ENST00000394949 CCDC121Q6ZUS5 278 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 AOX1Q06278 1338 aa19.59■□□□□ 0.73
SIN3A-203ENST00000394949 A6NNZ2 444 aa19.58■□□□□ 0.73
SIN3A-203ENST00000394949 TUBB8Q3ZCM7 444 aa19.58■□□□□ 0.73
SIN3A-203ENST00000394949 ANKRD13DQ6ZTN6 518 aa19.58■□□□□ 0.73
SIN3A-203ENST00000394949 PSMA7O14818 248 aa19.58■□□□□ 0.73
SIN3A-203ENST00000394949 CNGA4Q8IV77 575 aa19.58■□□□□ 0.73
SIN3A-203ENST00000394949 KRT23Q9C075 422 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms