RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 PCNTO95613 3336 aa29.33■■■□□ 2.29
PMS2P3-201ENST00000394921 F6X3S4 739 aa29.32■■■□□ 2.28
PMS2P3-201ENST00000394921 ADARB2Q9NS39 739 aaKnown RBP29.32■■■□□ 2.28
PMS2P3-201ENST00000394921 SPEF2Q9C093 1822 aa29.32■■■□□ 2.28
PMS2P3-201ENST00000394921 UFL1O94874 794 aa29.31■■■□□ 2.28
PMS2P3-201ENST00000394921 CDC5LQ99459 802 aaKnown RBP29.31■■■□□ 2.28
PMS2P3-201ENST00000394921 DOK7Q18PE1 504 aa29.3■■■□□ 2.28
PMS2P3-201ENST00000394921 ANKIB1Q9P2G1 1089 aa29.3■■■□□ 2.28
PMS2P3-201ENST00000394921 GGA1Q9UJY5 639 aa29.3■■■□□ 2.28
PMS2P3-201ENST00000394921 SCN9AQ15858 1988 aa29.3■■■□□ 2.28
PMS2P3-201ENST00000394921 ECE2O60344 883 aa29.29■■■□□ 2.28
PMS2P3-201ENST00000394921 BEND3Q5T5X7 828 aa29.29■■■□□ 2.28
PMS2P3-201ENST00000394921 BCL2L13Q9BXK5 485 aa29.29■■■□□ 2.28
PMS2P3-201ENST00000394921 PSMD14O00487 310 aa29.28■■■□□ 2.28
PMS2P3-201ENST00000394921 ZC3H12CQ9C0D7 883 aaKnown RBP29.28■■■□□ 2.28
PMS2P3-201ENST00000394921 KCNQ5Q9NR82 932 aa29.28■■■□□ 2.28
PMS2P3-201ENST00000394921 XDHP47989 1333 aa29.28■■■□□ 2.28
PMS2P3-201ENST00000394921 SHTN1A0MZ66 631 aa29.27■■■□□ 2.28
PMS2P3-201ENST00000394921 CSF1RP07333 972 aa29.27■■■□□ 2.28
PMS2P3-201ENST00000394921 BSDC1Q9NW68 430 aaPredicted RBP29.27■■■□□ 2.28
PMS2P3-201ENST00000394921 ZBTB12Q9Y330 459 aaPredicted RBP29.27■■■□□ 2.28
PMS2P3-201ENST00000394921 TMEM88BA6NKF7 163 aa29.26■■■□□ 2.27
PMS2P3-201ENST00000394921 MKRN1Q9UHC7 482 aaKnown RBP29.25■■■□□ 2.27
PMS2P3-201ENST00000394921 CNOT7Q9UIV1 285 aaKnown RBP29.25■■■□□ 2.27
PMS2P3-201ENST00000394921 MINPP1Q9UNW1 487 aa29.25■■■□□ 2.27
PMS2P3-201ENST00000394921 E9PSI1 815 aa29.24■■■□□ 2.27
PMS2P3-201ENST00000394921 HIRAP54198 1017 aaPredicted RBP29.24■■■□□ 2.27
PMS2P3-201ENST00000394921 FAM161AQ3B820 660 aa29.24■■■□□ 2.27
PMS2P3-201ENST00000394921 TRPM4Q8TD43 1214 aa29.24■■■□□ 2.27
PMS2P3-201ENST00000394921 WTIPA6NIX2 430 aaPredicted RBP29.23■■■□□ 2.27
PMS2P3-201ENST00000394921 CCER2I3L3R5 266 aa29.23■■■□□ 2.27
PMS2P3-201ENST00000394921 ATP2B4P23634 1241 aa29.23■■■□□ 2.27
PMS2P3-201ENST00000394921 FMR1Q06787 632 aaKnown RBP eCLIP29.23■■■□□ 2.27
PMS2P3-201ENST00000394921 DPF2Q92785 391 aa29.23■■■□□ 2.27
PMS2P3-201ENST00000394921 CNTNAP1P78357 1384 aa29.23■■■□□ 2.27
PMS2P3-201ENST00000394921 ITGA6P23229 1130 aa29.22■■■□□ 2.27
PMS2P3-201ENST00000394921 SLFN5Q08AF3 891 aa29.22■■■□□ 2.27
PMS2P3-201ENST00000394921 MICALL2Q8IY33 904 aa29.22■■■□□ 2.27
PMS2P3-201ENST00000394921 PGAP2Q9UHJ9 254 aa29.22■■■□□ 2.27
PMS2P3-201ENST00000394921 PSME4Q14997 1843 aa29.22■■■□□ 2.27
PMS2P3-201ENST00000394921 TRPM7Q96QT4 1865 aa29.21■■■□□ 2.27
PMS2P3-201ENST00000394921 FOXO4P98177 505 aa29.2■■■□□ 2.27
PMS2P3-201ENST00000394921 H7C1D1 291 aa29.2■■■□□ 2.26
PMS2P3-201ENST00000394921 TRAF5O00463 557 aa29.2■■■□□ 2.26
PMS2P3-201ENST00000394921 VIL1P09327 827 aaKnown RBP29.2■■■□□ 2.26
PMS2P3-201ENST00000394921 IGHMBP2P38935 993 aaKnown RBP29.2■■■□□ 2.26
PMS2P3-201ENST00000394921 MRPL50Q8N5N7 158 aaKnown RBP29.2■■■□□ 2.26
PMS2P3-201ENST00000394921 RPS12P25398 132 aaKnown RBP29.19■■■□□ 2.26
PMS2P3-201ENST00000394921 CDCA7LQ96GN5 454 aa29.19■■■□□ 2.26
PMS2P3-201ENST00000394921 MED23Q9ULK4 1368 aa29.18■■■□□ 2.26
PMS2P3-201ENST00000394921 GRM8O00222 908 aa29.18■■■□□ 2.26
PMS2P3-201ENST00000394921 ALDH1L1O75891 902 aa29.18■■■□□ 2.26
PMS2P3-201ENST00000394921 CCT4P50991 539 aaKnown RBP29.18■■■□□ 2.26
PMS2P3-201ENST00000394921 ZC3H15Q8WU90 426 aaKnown RBP29.18■■■□□ 2.26
PMS2P3-201ENST00000394921 G3V3G9 751 aa29.17■■■□□ 2.26
PMS2P3-201ENST00000394921 EPHA10Q5JZY3 1008 aa29.17■■■□□ 2.26
PMS2P3-201ENST00000394921 DCAF8Q5TAQ9 597 aa29.17■■■□□ 2.26
PMS2P3-201ENST00000394921 SLC4A10Q6U841 1118 aa29.17■■■□□ 2.26
PMS2P3-201ENST00000394921 SAMD7Q7Z3H4 446 aa29.17■■■□□ 2.26
PMS2P3-201ENST00000394921 EGFRP00533 1210 aa29.16■■■□□ 2.26
PMS2P3-201ENST00000394921 SRCIN1Q9C0H9 1055 aa29.16■■■□□ 2.26
PMS2P3-201ENST00000394921 ZNF609O15014 1411 aa29.15■■■□□ 2.26
PMS2P3-201ENST00000394921 RASSF10A6NK89 507 aa29.15■■■□□ 2.26
PMS2P3-201ENST00000394921 CST9Q5W186 159 aa29.15■■■□□ 2.26
PMS2P3-201ENST00000394921 TRMT2AQ8IZ69 625 aaKnown RBP29.15■■■□□ 2.26
PMS2P3-201ENST00000394921 SSH1Q8WYL5 1049 aa29.15■■■□□ 2.26
PMS2P3-201ENST00000394921 MPHOSPH8Q99549 860 aa29.15■■■□□ 2.26
PMS2P3-201ENST00000394921 GLIS2Q9BZE0 524 aaPredicted RBP29.15■■■□□ 2.26
PMS2P3-201ENST00000394921 ANKRD18BA2A2Z9 1011 aa29.14■■■□□ 2.25
PMS2P3-201ENST00000394921 HSPA1AP0DMV8 641 aaKnown RBP29.14■■■□□ 2.25
PMS2P3-201ENST00000394921 HSPA1BP0DMV9 641 aaKnown RBP29.14■■■□□ 2.25
PMS2P3-201ENST00000394921 VEGFBP49765 207 aa29.14■■■□□ 2.25
PMS2P3-201ENST00000394921 TBC1D10BQ4KMP7 808 aaPredicted RBP29.14■■■□□ 2.25
PMS2P3-201ENST00000394921 LEMD3Q9Y2U8 911 aa29.14■■■□□ 2.25
PMS2P3-201ENST00000394921 RSBN1LQ6PCB5 846 aaPredicted RBP29.13■■■□□ 2.25
PMS2P3-201ENST00000394921 LMBR1LQ6UX01 489 aa29.13■■■□□ 2.25
PMS2P3-201ENST00000394921 PODNQ7Z5L7 613 aa29.13■■■□□ 2.25
PMS2P3-201ENST00000394921 TXNRD3Q86VQ6 643 aa29.13■■■□□ 2.25
PMS2P3-201ENST00000394921 ANKRD2Q9GZV1 360 aa29.13■■■□□ 2.25
PMS2P3-201ENST00000394921 ZNF646O15015 1829 aaPredicted RBP29.12■■■□□ 2.25
PMS2P3-201ENST00000394921 A0A1B0GUL6 1792 aa29.12■■■□□ 2.25
PMS2P3-201ENST00000394921 C9orf78Q9NZ63 289 aaPredicted RBP29.12■■■□□ 2.25
PMS2P3-201ENST00000394921 POLR2AP24928 1970 aaKnown RBP29.12■■■□□ 2.25
PMS2P3-201ENST00000394921 CHRNDQ07001 517 aa29.11■■■□□ 2.25
PMS2P3-201ENST00000394921 IFIT5Q13325 482 aaKnown RBP29.11■■■□□ 2.25
PMS2P3-201ENST00000394921 DEFB115Q30KQ5 88 aa29.11■■■□□ 2.25
PMS2P3-201ENST00000394921 GMLQ99445 158 aa29.11■■■□□ 2.25
PMS2P3-201ENST00000394921 ABT1Q9ULW3 272 aaKnown RBP29.11■■■□□ 2.25
PMS2P3-201ENST00000394921 ZNF804BA4D1E1 1349 aa29.1■■■□□ 2.25
PMS2P3-201ENST00000394921 KLRK1P26718 216 aa29.1■■■□□ 2.25
PMS2P3-201ENST00000394921 AGBL3Q8NEM8 1001 aa29.1■■■□□ 2.25
PMS2P3-201ENST00000394921 KAZALD1Q96I82 304 aa29.1■■■□□ 2.25
PMS2P3-201ENST00000394921 CHMP3Q9Y3E7 222 aa29.1■■■□□ 2.25
PMS2P3-201ENST00000394921 PTPRCP08575 1304 aa29.09■■■□□ 2.25
PMS2P3-201ENST00000394921 USP17L3A6NCW0 530 aa29.09■■■□□ 2.25
PMS2P3-201ENST00000394921 USP17L4A6NCW7 530 aa29.09■■■□□ 2.25
PMS2P3-201ENST00000394921 RBM26Q5T8P6 1007 aaKnown RBP29.09■■■□□ 2.25
PMS2P3-201ENST00000394921 CDC37L1Q7L3B6 337 aa29.09■■■□□ 2.25
PMS2P3-201ENST00000394921 USP17L1Q7RTZ2 530 aa29.09■■■□□ 2.25
PMS2P3-201ENST00000394921 UTYO14607 1347 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms