RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CWC25Q9NXE8 425 aaPredicted RBP18.43■□□□□ 0.54
CPSF7-202ENST00000394888 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
CPSF7-202ENST00000394888 PIGBQ92521 554 aa18.42■□□□□ 0.54
CPSF7-202ENST00000394888 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
CPSF7-202ENST00000394888 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
CPSF7-202ENST00000394888 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
CPSF7-202ENST00000394888 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
CPSF7-202ENST00000394888 AP5Z1O43299 807 aa18.41■□□□□ 0.54
CPSF7-202ENST00000394888 CIAO1O76071 339 aa18.41■□□□□ 0.54
CPSF7-202ENST00000394888 CTDNEP1O95476 244 aa18.41■□□□□ 0.54
CPSF7-202ENST00000394888 NKX2-3Q8TAU0 364 aa18.41■□□□□ 0.54
CPSF7-202ENST00000394888 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
CPSF7-202ENST00000394888 CSF1RP07333 972 aa18.4■□□□□ 0.54
CPSF7-202ENST00000394888 HMG20BQ9P0W2 317 aa18.4■□□□□ 0.54
CPSF7-202ENST00000394888 SALL1Q9NSC2 1324 aa18.4■□□□□ 0.54
CPSF7-202ENST00000394888 SCARF1Q14162 830 aa18.4■□□□□ 0.54
CPSF7-202ENST00000394888 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
CPSF7-202ENST00000394888 FAM173BQ6P4H8 233 aa18.4■□□□□ 0.54
CPSF7-202ENST00000394888 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
CPSF7-202ENST00000394888 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.54
CPSF7-202ENST00000394888 MAST3O60307 1309 aa18.39■□□□□ 0.53
CPSF7-202ENST00000394888 TRIM28Q13263 835 aaKnown RBP18.39■□□□□ 0.53
CPSF7-202ENST00000394888 PLA2G12BQ9BX93 195 aa18.39■□□□□ 0.53
CPSF7-202ENST00000394888 EYA2O00167 538 aa18.39■□□□□ 0.53
CPSF7-202ENST00000394888 UBE2HP62256 183 aa18.39■□□□□ 0.53
CPSF7-202ENST00000394888 MCMDC2Q4G0Z9 681 aa18.39■□□□□ 0.53
CPSF7-202ENST00000394888 GTF3C6Q969F1 213 aa18.39■□□□□ 0.53
CPSF7-202ENST00000394888 M0R2C6 588 aa18.38■□□□□ 0.53
CPSF7-202ENST00000394888 JAK2O60674 1132 aa18.38■□□□□ 0.53
CPSF7-202ENST00000394888 ADORA1P30542 326 aa18.38■□□□□ 0.53
CPSF7-202ENST00000394888 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
CPSF7-202ENST00000394888 ADD1P35611 737 aaKnown RBP18.38■□□□□ 0.53
CPSF7-202ENST00000394888 TCIRG1Q13488 830 aa18.38■□□□□ 0.53
CPSF7-202ENST00000394888 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
CPSF7-202ENST00000394888 HLFQ16534 295 aa18.37■□□□□ 0.53
CPSF7-202ENST00000394888 HS1BP3Q53T59 392 aa18.37■□□□□ 0.53
CPSF7-202ENST00000394888 BLOC1S2Q6QNY1 142 aa18.37■□□□□ 0.53
CPSF7-202ENST00000394888 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
CPSF7-202ENST00000394888 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
CPSF7-202ENST00000394888 NOL7Q9UMY1 257 aaKnown RBP18.37■□□□□ 0.53
CPSF7-202ENST00000394888 SMARCC2Q8TAQ2 1214 aa18.37■□□□□ 0.53
CPSF7-202ENST00000394888 A0A1B0GUL7 405 aa18.36■□□□□ 0.53
CPSF7-202ENST00000394888 SCRN1Q12765 414 aa18.36■□□□□ 0.53
CPSF7-202ENST00000394888 DNAJC10Q8IXB1 793 aa18.36■□□□□ 0.53
CPSF7-202ENST00000394888 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
CPSF7-202ENST00000394888 ZSCAN30Q86W11 494 aa18.36■□□□□ 0.53
CPSF7-202ENST00000394888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
CPSF7-202ENST00000394888 TAF1P21675 1872 aa18.36■□□□□ 0.53
CPSF7-202ENST00000394888 ZNF831Q5JPB2 1677 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 GOLIM4O00461 696 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 VSIG10Q8N0Z9 540 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 RNF214Q8ND24 703 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 OSBP2Q969R2 916 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 TSPY26PQ9H489 355 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 ELP1O95163 1332 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 TIAM2Q8IVF5 1701 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 PSMA5P28066 241 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 RESTQ13127 1097 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 CCDC183Q5T5S1 534 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 FIBPO43427 364 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
CPSF7-202ENST00000394888 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
CPSF7-202ENST00000394888 ATRNO75882 1429 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 Q6ZUG5 572 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 NEK1Q96PY6 1258 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 DSCC1Q9BVC3 393 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 HELLSQ9NRZ9 838 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 ILDR1Q86SU0 546 aaPredicted RBP18.34■□□□□ 0.53
CPSF7-202ENST00000394888 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 BCL9LQ86UU0 1499 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 TICAM2Q86XR7 235 aa18.34■□□□□ 0.53
CPSF7-202ENST00000394888 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.53
CPSF7-202ENST00000394888 RIPOR2Q9Y4F9 1068 aa18.33■□□□□ 0.53
CPSF7-202ENST00000394888 ZNF500O60304 480 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-202ENST00000394888 CYP19A1P11511 503 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-202ENST00000394888 LIG1P18858 919 aa18.33■□□□□ 0.52
CPSF7-202ENST00000394888 PGBD1Q96JS3 809 aa18.33■□□□□ 0.52
CPSF7-202ENST00000394888 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.52
CPSF7-202ENST00000394888 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-202ENST00000394888 RBM43Q6ZSC3 357 aaKnown RBP18.33■□□□□ 0.52
CPSF7-202ENST00000394888 FAM89AQ96GI7 184 aa18.33■□□□□ 0.52
CPSF7-202ENST00000394888 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
CPSF7-202ENST00000394888 PI16Q6UXB8 463 aa18.32■□□□□ 0.52
CPSF7-202ENST00000394888 FBXL16Q8N461 479 aa18.32■□□□□ 0.52
CPSF7-202ENST00000394888 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
CPSF7-202ENST00000394888 STK3Q13188 491 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 TTLL5Q6EMB2 1281 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
CPSF7-202ENST00000394888 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 EVCP57679 992 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 FERMT3Q86UX7 667 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-202ENST00000394888 NSUN7Q8NE18 718 aaKnown RBP18.31■□□□□ 0.52
CPSF7-202ENST00000394888 PFKFB2O60825 505 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
CPSF7-202ENST00000394888 LARP1BQ659C4 914 aaKnown RBP18.31■□□□□ 0.52
CPSF7-202ENST00000394888 E7EWF7 191 aa18.3■□□□□ 0.52
CPSF7-202ENST00000394888 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
CPSF7-202ENST00000394888 GIMAP6Q6P9H5 292 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms