RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 TBC1D9BQ66K14 1250 aa24.52■■□□□ 1.52
PRKCD-202ENST00000394729 MPHOSPH8Q99549 860 aa24.52■■□□□ 1.52
PRKCD-202ENST00000394729 TRIM37O94972 964 aa24.51■■□□□ 1.51
PRKCD-202ENST00000394729 TMX3Q96JJ7 454 aa24.51■■□□□ 1.51
PRKCD-202ENST00000394729 NUP98P52948 1817 aa24.5■■□□□ 1.51
PRKCD-202ENST00000394729 VPS53Q5VIR6 699 aa24.5■■□□□ 1.51
PRKCD-202ENST00000394729 CCDC171Q6TFL3 1326 aa24.5■■□□□ 1.51
PRKCD-202ENST00000394729 HAUS7Q99871 368 aa24.5■■□□□ 1.51
PRKCD-202ENST00000394729 SLC51AQ86UW1 340 aa24.49■■□□□ 1.51
PRKCD-202ENST00000394729 NWD2Q9ULI1 1742 aa24.49■■□□□ 1.51
PRKCD-202ENST00000394729 A0A0G2JLW4 131 aa24.49■■□□□ 1.51
PRKCD-202ENST00000394729 ZAP70P43403 619 aa24.49■■□□□ 1.51
PRKCD-202ENST00000394729 CCDC158Q5M9N0 1113 aa24.49■■□□□ 1.51
PRKCD-202ENST00000394729 TNPO1Q92973 898 aaKnown RBP24.49■■□□□ 1.51
PRKCD-202ENST00000394729 TRPC5Q9UL62 973 aaPredicted RBP24.49■■□□□ 1.51
PRKCD-202ENST00000394729 WASHC4Q2M389 1173 aa24.48■■□□□ 1.51
PRKCD-202ENST00000394729 RIPOR2Q9Y4F9 1068 aa24.48■■□□□ 1.51
PRKCD-202ENST00000394729 EIF5BO60841 1220 aaKnown RBP24.48■■□□□ 1.51
PRKCD-202ENST00000394729 ZPR1O75312 459 aa24.47■■□□□ 1.51
PRKCD-202ENST00000394729 FAM196AQ6ZSG2 479 aa24.47■■□□□ 1.51
PRKCD-202ENST00000394729 LRRC4BQ9NT99 713 aa24.47■■□□□ 1.51
PRKCD-202ENST00000394729 NTSR2O95665 410 aa24.46■■□□□ 1.51
PRKCD-202ENST00000394729 PHKA1P46020 1223 aa24.46■■□□□ 1.51
PRKCD-202ENST00000394729 CREB3L3Q68CJ9 461 aa24.46■■□□□ 1.51
PRKCD-202ENST00000394729 CDHR2Q9BYE9 1310 aa24.46■■□□□ 1.51
PRKCD-202ENST00000394729 CIAO1O76071 339 aa24.45■■□□□ 1.51
PRKCD-202ENST00000394729 PLA2G12BQ9BX93 195 aa24.45■■□□□ 1.51
PRKCD-202ENST00000394729 LRRC2Q9BYS8 371 aa24.45■■□□□ 1.51
PRKCD-202ENST00000394729 AK2P54819 239 aa24.45■■□□□ 1.5
PRKCD-202ENST00000394729 ARHGEF1Q92888 912 aaKnown RBP24.45■■□□□ 1.5
PRKCD-202ENST00000394729 ZNF652Q9Y2D9 606 aa24.45■■□□□ 1.5
PRKCD-202ENST00000394729 RTCBQ9Y3I0 505 aaKnown RBP24.45■■□□□ 1.5
PRKCD-202ENST00000394729 ZNF609O15014 1411 aa24.45■■□□□ 1.5
PRKCD-202ENST00000394729 KBTBD3Q8NAB2 608 aa24.44■■□□□ 1.5
PRKCD-202ENST00000394729 IDH1O75874 414 aaKnown RBP24.44■■□□□ 1.5
PRKCD-202ENST00000394729 BCL2L12Q9HB09 334 aa24.43■■□□□ 1.5
PRKCD-202ENST00000394729 AKAP2Q9Y2D5 859 aa24.43■■□□□ 1.5
PRKCD-202ENST00000394729 PPFIA3O75145 1194 aa24.43■■□□□ 1.5
PRKCD-202ENST00000394729 MCAMP43121 646 aa24.43■■□□□ 1.5
PRKCD-202ENST00000394729 PDE8BO95263 885 aa24.43■■□□□ 1.5
PRKCD-202ENST00000394729 LARGE1O95461 756 aa24.43■■□□□ 1.5
PRKCD-202ENST00000394729 ZKSCAN1P17029 563 aaPredicted RBP24.43■■□□□ 1.5
PRKCD-202ENST00000394729 NBPF5PQ86XG9 351 aaPredicted RBP24.43■■□□□ 1.5
PRKCD-202ENST00000394729 SLC27A2O14975 620 aa24.42■■□□□ 1.5
PRKCD-202ENST00000394729 AK7Q96M32 723 aa24.42■■□□□ 1.5
PRKCD-202ENST00000394729 HIP1O00291 1037 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 RFC4P35249 363 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 STK3Q13188 491 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 SETDB2Q96T68 719 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 RIC1Q4ADV7 1423 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 MCM4P33991 863 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 HAND2P61296 217 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 NECTIN1Q15223 517 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 CCDC152Q4G0S7 254 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 NECAB1Q8N987 351 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 MAP4K1Q92918 833 aa24.41■■□□□ 1.5
PRKCD-202ENST00000394729 MCMDC2Q4G0Z9 681 aa24.4■■□□□ 1.5
PRKCD-202ENST00000394729 TTLL5Q6EMB2 1281 aa24.4■■□□□ 1.5
PRKCD-202ENST00000394729 CHST3Q7LGC8 479 aa24.4■■□□□ 1.5
PRKCD-202ENST00000394729 DDIT3P35638 169 aa24.4■■□□□ 1.5
PRKCD-202ENST00000394729 BCAMP50895 628 aa24.4■■□□□ 1.5
PRKCD-202ENST00000394729 ANAPC15P60006 121 aa24.4■■□□□ 1.5
PRKCD-202ENST00000394729 IGHMBP2P38935 993 aaKnown RBP24.39■■□□□ 1.5
PRKCD-202ENST00000394729 PARP10Q53GL7 1025 aa24.39■■□□□ 1.5
PRKCD-202ENST00000394729 CCDC102BQ68D86 513 aa24.39■■□□□ 1.5
PRKCD-202ENST00000394729 TAOK2Q9UL54 1235 aa24.39■■□□□ 1.5
PRKCD-202ENST00000394729 JAG2Q9Y219 1238 aa24.39■■□□□ 1.5
PRKCD-202ENST00000394729 M0R2C6 588 aa24.39■■□□□ 1.49
PRKCD-202ENST00000394729 OSBP2Q969R2 916 aa24.39■■□□□ 1.49
PRKCD-202ENST00000394729 TAF1P21675 1872 aa24.39■■□□□ 1.49
PRKCD-202ENST00000394729 RUFY3Q7L099 469 aa24.39■■□□□ 1.49
PRKCD-202ENST00000394729 CELF1Q92879 486 aaKnown RBP24.39■■□□□ 1.49
PRKCD-202ENST00000394729 PDRG1Q9NUG6 133 aa24.39■■□□□ 1.49
PRKCD-202ENST00000394729 STK11IPQ8N1F8 1099 aa24.38■■□□□ 1.49
PRKCD-202ENST00000394729 NAP1L2Q9ULW6 460 aaPredicted RBP24.38■■□□□ 1.49
PRKCD-202ENST00000394729 CCDC83Q8IWF9 413 aa24.37■■□□□ 1.49
PRKCD-202ENST00000394729 VGLL2Q8N8G2 317 aa24.37■■□□□ 1.49
PRKCD-202ENST00000394729 GPR108Q9NPR9 543 aa24.37■■□□□ 1.49
PRKCD-202ENST00000394729 ABCC12Q96J65 1359 aa24.37■■□□□ 1.49
PRKCD-202ENST00000394729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.37■■□□□ 1.49
PRKCD-202ENST00000394729 RPS6KA4O75676 772 aa24.37■■□□□ 1.49
PRKCD-202ENST00000394729 PUS7LQ9H0K6 701 aaKnown RBP24.37■■□□□ 1.49
PRKCD-202ENST00000394729 CYP46A1Q9Y6A2 500 aa24.37■■□□□ 1.49
PRKCD-202ENST00000394729 CHRNDQ07001 517 aa24.36■■□□□ 1.49
PRKCD-202ENST00000394729 KRT27Q7Z3Y8 459 aa24.36■■□□□ 1.49
PRKCD-202ENST00000394729 MAST3O60307 1309 aa24.36■■□□□ 1.49
PRKCD-202ENST00000394729 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
PRKCD-202ENST00000394729 RAB3GAP1Q15042 981 aa24.35■■□□□ 1.49
PRKCD-202ENST00000394729 TRAPPC3LQ5T215 181 aa24.35■■□□□ 1.49
PRKCD-202ENST00000394729 SLC9C2Q5TAH2 1124 aa24.35■■□□□ 1.49
PRKCD-202ENST00000394729 MED23Q9ULK4 1368 aa24.35■■□□□ 1.49
PRKCD-202ENST00000394729 CYP21A2P08686 494 aa24.35■■□□□ 1.49
PRKCD-202ENST00000394729 GYG1P46976 350 aa24.35■■□□□ 1.49
PRKCD-202ENST00000394729 BTAF1O14981 1849 aa24.35■■□□□ 1.49
PRKCD-202ENST00000394729 PUM3Q15397 648 aaKnown RBP24.34■■□□□ 1.49
PRKCD-202ENST00000394729 PIH1D3Q9NQM4 214 aaKnown RBP24.34■■□□□ 1.49
PRKCD-202ENST00000394729 NARFQ9UHQ1 456 aa24.34■■□□□ 1.49
PRKCD-202ENST00000394729 COL4A1P02462 1669 aa24.34■■□□□ 1.49
PRKCD-202ENST00000394729 RNF113AO15541 343 aaKnown RBP24.34■■□□□ 1.49
PRKCD-202ENST00000394729 MCTP1Q6DN14 999 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms