RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 AKAP2Q9Y2D5 859 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 TACC3Q9Y6A5 838 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 GOLGA8AA7E2F4 631 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 GOLGA8BA8MQT2 603 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 RAB11FIP3O75154 756 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 ATP2B1P20020 1258 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 NEK2P51955 445 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 GJC2Q5T442 439 aaPredicted RBP10.24□□□□□ -0.77
CHD2-201ENST00000394196 TSC1Q92574 1164 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 MIS12Q9H081 205 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 KIAA1524Q8TCG1 905 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 TRMT1Q9NXH9 659 aaKnown RBP10.24□□□□□ -0.77
CHD2-201ENST00000394196 ODF2LQ9ULJ1 636 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 PLCB4Q15147 1175 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 GLE1Q53GS7 698 aaKnown RBP10.24□□□□□ -0.77
CHD2-201ENST00000394196 BBOF1Q8ND07 529 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 TMC6Q7Z403 805 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 ERO1AQ96HE7 468 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 EVI5O60447 810 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 AEBP2Q6ZN18 517 aaPredicted RBP10.24□□□□□ -0.77
CHD2-201ENST00000394196 RMND1Q9NWS8 449 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 PPP1R9AQ9ULJ8 1098 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 CNNM3Q8NE01 707 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 GAS2L2Q8NHY3 880 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 VPS18Q9P253 973 aa10.24□□□□□ -0.77
CHD2-201ENST00000394196 VPS41P49754 854 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 SF3B2Q13435 895 aaKnown RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 TNPO1Q92973 898 aaKnown RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 EPSTI1Q96J88 318 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 SPTY2D1Q68D10 685 aaPredicted RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 MCTP2Q6DN12 878 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 PARVBQ9HBI1 364 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 ARIH1Q9Y4X5 557 aaPredicted RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 KRT86O43790 486 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 STXBP4Q6ZWJ1 553 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 SEPT2Q15019 361 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 INAQ16352 499 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 GKAP1Q5VSY0 366 aaPredicted RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 SH2D4AQ9H788 454 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 CTTNBP2NLQ9P2B4 639 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 ZBTB41Q5SVQ8 909 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 HELBQ8NG08 1087 aaPredicted RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 ZHX3Q9H4I2 956 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 TUBA8Q9NY65 449 aaPredicted RBP10.23□□□□□ -0.77
CHD2-201ENST00000394196 KCNA4P22459 653 aa10.23□□□□□ -0.77
CHD2-201ENST00000394196 IQCA1LA6NCM1 817 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 CASTP20810 708 aaKnown RBP10.22□□□□□ -0.77
CHD2-201ENST00000394196 NBPF9Q3BBW0 867 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 RASIP1Q5U651 963 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 FYB2Q5VWT5 728 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 CCHCR1Q8TD31 782 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 TTC21AQ8NDW8 1320 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 LZICQ8WZA0 190 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 ATP6V1E2Q96A05 226 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 CABS1Q96KC9 395 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 NDUFAB1O14561 156 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 PHBP35232 272 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 GDAP1L1Q96MZ0 367 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 SCOCQ9UIL1 159 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 CCDC62Q6P9F0 684 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 ZSCAN23Q3MJ62 389 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 TDRD12Q587J7 1177 aaKnown RBP10.22□□□□□ -0.77
CHD2-201ENST00000394196 HNRNPMP52272 730 aaKnown RBP eCLIP10.22□□□□□ -0.777e-7■■■■□ 21.5
CHD2-201ENST00000394196 CCDC80Q76M96 950 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 KRT75O95678 551 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 CCDC159P0C7I6 412 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 ATP2A2P16615 1042 aaKnown RBP10.22□□□□□ -0.77
CHD2-201ENST00000394196 ESRRGP62508 458 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 ZSCAN26Q16670 478 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 FAM200AQ8TCP9 573 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 ANLNQ9NQW6 1124 aa10.22□□□□□ -0.77
CHD2-201ENST00000394196 MTRF1LQ9UGC7 380 aaKnown RBP10.22□□□□□ -0.77
CHD2-201ENST00000394196 AKNAQ7Z591 1439 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 GSDMBQ8TAX9 411 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 NDC80O14777 642 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 BMP15O95972 392 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 ZNF513Q8N8E2 541 aaPredicted RBP10.21□□□□□ -0.77
CHD2-201ENST00000394196 UBAC1Q9BSL1 405 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 CLUL1Q15846 466 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 MPNDQ8N594 471 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 MCUR1Q96AQ8 359 aa10.21□□□□□ -0.77
CHD2-201ENST00000394196 CCDC170Q8IYT3 715 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 STAG1Q8WVM7 1258 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.21□□□□□ -0.78
CHD2-201ENST00000394196 MX1P20591 662 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 TMEM266Q2M3C6 531 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 IQCA1Q86XH1 822 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.78
CHD2-201ENST00000394196 PNISRQ8TF01 805 aaKnown RBP10.21□□□□□ -0.78
CHD2-201ENST00000394196 TSC22D1Q15714 1073 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 CCDC122Q5T0U0 273 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 PPP4R4Q6NUP7 873 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 C8orf76Q96K31 380 aa10.21□□□□□ -0.78
CHD2-201ENST00000394196 LONP1P36776 959 aaKnown RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 UBASH3AP57075 661 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 PRPF4BQ13523 1007 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms