RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 IVLP07476 585 aa25.48■■□□□ 1.67
CLDND1-202ENST00000394180 ORC3Q9UBD5 711 aaPredicted RBP25.48■■□□□ 1.67
CLDND1-202ENST00000394180 PHLPP2Q6ZVD8 1323 aa25.48■■□□□ 1.67
CLDND1-202ENST00000394180 FAM208AQ9UK61 1670 aaKnown RBP25.47■■□□□ 1.67
CLDND1-202ENST00000394180 MAPK8IP2Q13387 824 aaPredicted RBP25.47■■□□□ 1.67
CLDND1-202ENST00000394180 ARHGAP29Q52LW3 1261 aa25.47■■□□□ 1.67
CLDND1-202ENST00000394180 CCDC158Q5M9N0 1113 aa25.47■■□□□ 1.67
CLDND1-202ENST00000394180 HYPKQ9NX55 129 aa25.47■■□□□ 1.67
CLDND1-202ENST00000394180 JCADQ9P266 1359 aa25.47■■□□□ 1.67
CLDND1-202ENST00000394180 A0A1B0GUL7 405 aa25.47■■□□□ 1.67
CLDND1-202ENST00000394180 ELL2O00472 640 aaPredicted RBP25.47■■□□□ 1.67
CLDND1-202ENST00000394180 GOLGA6L4A6NEF3 574 aa25.46■■□□□ 1.67
CLDND1-202ENST00000394180 SGSM2O43147 1006 aa25.46■■□□□ 1.67
CLDND1-202ENST00000394180 CCDC191Q8NCU4 936 aa25.46■■□□□ 1.67
CLDND1-202ENST00000394180 NEK11Q8NG66 645 aa25.46■■□□□ 1.67
CLDND1-202ENST00000394180 SECISBP2LQ93073 1101 aaKnown RBP25.46■■□□□ 1.67
CLDND1-202ENST00000394180 TRERF1Q96PN7 1200 aa25.46■■□□□ 1.67
CLDND1-202ENST00000394180 UBXN4Q92575 508 aa25.45■■□□□ 1.67
CLDND1-202ENST00000394180 MEGF6O75095 1541 aa25.45■■□□□ 1.66
CLDND1-202ENST00000394180 APBB1O00213 710 aa25.45■■□□□ 1.66
CLDND1-202ENST00000394180 RPS6KA5O75582 802 aa25.45■■□□□ 1.66
CLDND1-202ENST00000394180 RAPGEF4Q8WZA2 1011 aa25.45■■□□□ 1.66
CLDND1-202ENST00000394180 RILPL2Q969X0 211 aa25.45■■□□□ 1.66
CLDND1-202ENST00000394180 PLEKHG2Q9H7P9 1386 aa25.45■■□□□ 1.66
CLDND1-202ENST00000394180 EFCAB8A8MWE9 144 aa25.44■■□□□ 1.66
CLDND1-202ENST00000394180 CCDC150Q8NCX0 1101 aa25.44■■□□□ 1.66
CLDND1-202ENST00000394180 KCNB2Q92953 911 aa25.44■■□□□ 1.66
CLDND1-202ENST00000394180 SMARCE1Q969G3 411 aa25.44■■□□□ 1.66
CLDND1-202ENST00000394180 COL14A1Q05707 1796 aaKnown RBP25.44■■□□□ 1.66
CLDND1-202ENST00000394180 NRDCO43847 1150 aa25.44■■□□□ 1.66
CLDND1-202ENST00000394180 PSEN1P49768 467 aa25.44■■□□□ 1.66
CLDND1-202ENST00000394180 GNAI2P04899 355 aa25.43■■□□□ 1.66
CLDND1-202ENST00000394180 MSL3Q8N5Y2 521 aaKnown RBP25.43■■□□□ 1.66
CLDND1-202ENST00000394180 CAMK4Q16566 473 aa25.43■■□□□ 1.66
CLDND1-202ENST00000394180 CKAP2LQ8IYA6 745 aa25.43■■□□□ 1.66
CLDND1-202ENST00000394180 LSG1Q9H089 658 aaKnown RBP25.43■■□□□ 1.66
CLDND1-202ENST00000394180 RRP15Q9Y3B9 282 aaKnown RBP25.43■■□□□ 1.66
CLDND1-202ENST00000394180 GNAT3A8MTJ3 354 aa25.42■■□□□ 1.66
CLDND1-202ENST00000394180 MAGEA9P43362 315 aa25.42■■□□□ 1.66
CLDND1-202ENST00000394180 PLEKHO1Q53GL0 409 aaPredicted RBP25.42■■□□□ 1.66
CLDND1-202ENST00000394180 DNAJC25Q9H1X3 360 aa25.42■■□□□ 1.66
CLDND1-202ENST00000394180 STX1AQ16623 288 aa25.41■■□□□ 1.66
CLDND1-202ENST00000394180 ZNF530Q6P9A1 599 aaPredicted RBP25.41■■□□□ 1.66
CLDND1-202ENST00000394180 CERS3Q8IU89 383 aa25.41■■□□□ 1.66
CLDND1-202ENST00000394180 CASTP20810 708 aaKnown RBP25.41■■□□□ 1.66
CLDND1-202ENST00000394180 C10orf67Q8IYJ2 551 aa25.41■■□□□ 1.66
CLDND1-202ENST00000394180 TATP17735 454 aaPredicted RBP25.4■■□□□ 1.66
CLDND1-202ENST00000394180 ACTN2P35609 894 aa25.4■■□□□ 1.66
CLDND1-202ENST00000394180 CARD10Q9BWT7 1032 aa25.4■■□□□ 1.66
CLDND1-202ENST00000394180 MAP3K5Q99683 1374 aa25.4■■□□□ 1.66
CLDND1-202ENST00000394180 SPATA32Q96LK8 384 aa25.4■■□□□ 1.66
CLDND1-202ENST00000394180 TTC41PQ6P2S7 1318 aa25.39■■□□□ 1.66
CLDND1-202ENST00000394180 OAS2P29728 719 aaKnown RBP25.39■■□□□ 1.66
CLDND1-202ENST00000394180 AMOTQ4VCS5 1084 aa25.39■■□□□ 1.66
CLDND1-202ENST00000394180 PPP1R13BQ96KQ4 1090 aa25.39■■□□□ 1.66
CLDND1-202ENST00000394180 ZSWIM6Q9HCJ5 1215 aa25.39■■□□□ 1.66
CLDND1-202ENST00000394180 VPS37CA5D8V6 355 aaPredicted RBP25.39■■□□□ 1.65
CLDND1-202ENST00000394180 SMC1AQ14683 1233 aaKnown RBP25.39■■□□□ 1.65
CLDND1-202ENST00000394180 JAKMIP3Q5VZ66 844 aa25.39■■□□□ 1.65
CLDND1-202ENST00000394180 IL17REQ8NFR9 667 aa25.39■■□□□ 1.65
CLDND1-202ENST00000394180 RNF216Q9NWF9 866 aaPredicted RBP25.39■■□□□ 1.65
CLDND1-202ENST00000394180 ETF1P62495 437 aaKnown RBP25.38■■□□□ 1.65
CLDND1-202ENST00000394180 ATP8B2P98198 1209 aa25.38■■□□□ 1.65
CLDND1-202ENST00000394180 LARP1BQ659C4 914 aaKnown RBP25.38■■□□□ 1.65
CLDND1-202ENST00000394180 CCDC83Q8IWF9 413 aa25.38■■□□□ 1.65
CLDND1-202ENST00000394180 LEO1Q8WVC0 666 aaPredicted RBP25.38■■□□□ 1.65
CLDND1-202ENST00000394180 C8orf37Q96NL8 207 aa25.38■■□□□ 1.65
CLDND1-202ENST00000394180 PLCH1Q4KWH8 1693 aa25.38■■□□□ 1.65
CLDND1-202ENST00000394180 CRB1P82279 1406 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 TADA3O75528 432 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 GNAI3P08754 354 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 E4F1Q66K89 784 aaPredicted RBP25.37■■□□□ 1.65
CLDND1-202ENST00000394180 REXO1L1PQ8IX06 675 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 GPR161Q8N6U8 529 aaKnown RBP25.37■■□□□ 1.65
CLDND1-202ENST00000394180 TRMT1Q9NXH9 659 aaKnown RBP25.37■■□□□ 1.65
CLDND1-202ENST00000394180 DNAI1Q9UI46 699 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 JRKLQ9Y4A0 524 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 CHL1O00533 1208 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 POLR3GO15318 223 aaPredicted RBP25.37■■□□□ 1.65
CLDND1-202ENST00000394180 TBC1D8O95759 1140 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 ST5P78524 1137 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 LGR6Q9HBX8 967 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 PDRG1Q9NUG6 133 aa25.37■■□□□ 1.65
CLDND1-202ENST00000394180 LRRFIP1Q32MZ4 808 aaKnown RBP25.36■■□□□ 1.65
CLDND1-202ENST00000394180 SUGP1Q8IWZ8 645 aaKnown RBP25.36■■□□□ 1.65
CLDND1-202ENST00000394180 ZNF622Q969S3 477 aaKnown RBP eCLIP25.36■■□□□ 1.65
CLDND1-202ENST00000394180 ALDH8A1Q9H2A2 487 aaPredicted RBP25.36■■□□□ 1.65
CLDND1-202ENST00000394180 MIS18AQ9NYP9 233 aa25.36■■□□□ 1.65
CLDND1-202ENST00000394180 LRP6O75581 1613 aa25.36■■□□□ 1.65
CLDND1-202ENST00000394180 KRT24Q2M2I5 525 aa25.36■■□□□ 1.65
CLDND1-202ENST00000394180 TTC31Q49AM3 519 aaPredicted RBP25.36■■□□□ 1.65
CLDND1-202ENST00000394180 MPRIPQ6WCQ1 1025 aa25.36■■□□□ 1.65
CLDND1-202ENST00000394180 SWT1Q5T5J6 900 aaKnown RBP25.35■■□□□ 1.65
CLDND1-202ENST00000394180 CC2D1AQ6P1N0 951 aaPredicted RBP25.35■■□□□ 1.65
CLDND1-202ENST00000394180 CYP46A1Q9Y6A2 500 aa25.35■■□□□ 1.65
CLDND1-202ENST00000394180 TRIM66O15016 1216 aa25.35■■□□□ 1.65
CLDND1-202ENST00000394180 TPRNQ4KMQ1 711 aa25.35■■□□□ 1.65
CLDND1-202ENST00000394180 AKAP4Q5JQC9 854 aa25.35■■□□□ 1.65
CLDND1-202ENST00000394180 C1orf141Q5JVX7 400 aa25.35■■□□□ 1.65
CLDND1-202ENST00000394180 RASEFQ8IZ41 740 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms