RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 GGA1Q9UJY5 639 aa29.34■■■□□ 2.29
HMGA2-202ENST00000393577 EAPPQ56P03 285 aaPredicted RBP29.33■■■□□ 2.29
HMGA2-202ENST00000393577 BSDC1Q9NW68 430 aaPredicted RBP29.33■■■□□ 2.29
HMGA2-202ENST00000393577 C9orf78Q9NZ63 289 aaPredicted RBP29.33■■■□□ 2.29
HMGA2-202ENST00000393577 XDHP47989 1333 aa29.32■■■□□ 2.28
HMGA2-202ENST00000393577 YDJCA8MPS7 323 aa29.32■■■□□ 2.28
HMGA2-202ENST00000393577 CT47B1P0C2W7 299 aaPredicted RBP29.32■■■□□ 2.28
HMGA2-202ENST00000393577 LMOD1P29536 600 aaPredicted RBP29.32■■■□□ 2.28
HMGA2-202ENST00000393577 SCNN1DP51172 638 aa29.32■■■□□ 2.28
HMGA2-202ENST00000393577 CIAPIN1Q6FI81 312 aa29.32■■■□□ 2.28
HMGA2-202ENST00000393577 CHADLQ6NUI6 762 aa29.32■■■□□ 2.28
HMGA2-202ENST00000393577 DBNDD1Q9H9R9 158 aa29.32■■■□□ 2.28
HMGA2-202ENST00000393577 RAD17O75943 681 aa29.31■■■□□ 2.28
HMGA2-202ENST00000393577 IGHMBP2P38935 993 aaKnown RBP29.31■■■□□ 2.28
HMGA2-202ENST00000393577 FOXO4P98177 505 aa29.31■■■□□ 2.28
HMGA2-202ENST00000393577 LDHDQ86WU2 507 aa29.31■■■□□ 2.28
HMGA2-202ENST00000393577 HNRNPUQ00839 825 aaKnown RBP eCLIP29.3■■■□□ 2.286e-6■□□□□ 8.3
HMGA2-202ENST00000393577 MINPP1Q9UNW1 487 aa29.3■■■□□ 2.28
HMGA2-202ENST00000393577 ADAMTSL1Q8N6G6 1762 aa29.29■■■□□ 2.28
HMGA2-202ENST00000393577 DOK7Q18PE1 504 aa29.29■■■□□ 2.28
HMGA2-202ENST00000393577 ZC3H12CQ9C0D7 883 aaKnown RBP29.29■■■□□ 2.28
HMGA2-202ENST00000393577 CHMP3Q9Y3E7 222 aa29.29■■■□□ 2.28
HMGA2-202ENST00000393577 ECE2O60344 883 aa29.28■■■□□ 2.28
HMGA2-202ENST00000393577 ATP2B4P23634 1241 aa29.28■■■□□ 2.28
HMGA2-202ENST00000393577 EPS15P42566 896 aa29.28■■■□□ 2.28
HMGA2-202ENST00000393577 TNIP1Q15025 636 aa29.28■■■□□ 2.28
HMGA2-202ENST00000393577 EPHA10Q5JZY3 1008 aa29.28■■■□□ 2.28
HMGA2-202ENST00000393577 PNMA8AQ86V59 439 aaPredicted RBP29.28■■■□□ 2.28
HMGA2-202ENST00000393577 ANKRD18BA2A2Z9 1011 aa29.27■■■□□ 2.28
HMGA2-202ENST00000393577 GMPSP49915 693 aaPredicted RBP29.27■■■□□ 2.28
HMGA2-202ENST00000393577 MPHOSPH8Q99549 860 aa29.27■■■□□ 2.28
HMGA2-202ENST00000393577 HTRA3P83110 453 aa29.26■■■□□ 2.27
HMGA2-202ENST00000393577 LMBR1LQ6UX01 489 aa29.26■■■□□ 2.27
HMGA2-202ENST00000393577 CLEC11AQ9Y240 323 aa29.26■■■□□ 2.27
HMGA2-202ENST00000393577 IFIT5Q13325 482 aaKnown RBP29.25■■■□□ 2.27
HMGA2-202ENST00000393577 SUCLG2Q96I99 432 aa29.25■■■□□ 2.27
HMGA2-202ENST00000393577 GPRC5DQ9NZD1 345 aa29.25■■■□□ 2.27
HMGA2-202ENST00000393577 G3V3G9 751 aa29.24■■■□□ 2.27
HMGA2-202ENST00000393577 NBPF7P0C2Y1 421 aaPredicted RBP29.24■■■□□ 2.27
HMGA2-202ENST00000393577 DCAF8Q5TAQ9 597 aa29.24■■■□□ 2.27
HMGA2-202ENST00000393577 SCN9AQ15858 1988 aa29.24■■■□□ 2.27
HMGA2-202ENST00000393577 UTYO14607 1347 aa29.23■■■□□ 2.27
HMGA2-202ENST00000393577 WTIPA6NIX2 430 aaPredicted RBP29.23■■■□□ 2.27
HMGA2-202ENST00000393577 PSMD14O00487 310 aa29.23■■■□□ 2.27
HMGA2-202ENST00000393577 CCT4P50991 539 aaKnown RBP29.23■■■□□ 2.27
HMGA2-202ENST00000393577 RARSP54136 660 aaKnown RBP29.22■■■□□ 2.27
HMGA2-202ENST00000393577 KCNQ5Q9NR82 932 aa29.22■■■□□ 2.27
HMGA2-202ENST00000393577 NOB1Q9ULX3 412 aaKnown RBP29.22■■■□□ 2.27
HMGA2-202ENST00000393577 KAZALD1Q96I82 304 aa29.21■■■□□ 2.27
HMGA2-202ENST00000393577 A0A1B0GUL6 1792 aa29.21■■■□□ 2.27
HMGA2-202ENST00000393577 BRPF1P55201 1214 aaPredicted RBP29.2■■■□□ 2.26
HMGA2-202ENST00000393577 CCDC57Q2TAC2 916 aa29.2■■■□□ 2.26
HMGA2-202ENST00000393577 ANKRD2Q9GZV1 360 aa29.2■■■□□ 2.26
HMGA2-202ENST00000393577 ADARB2Q9NS39 739 aaKnown RBP29.2■■■□□ 2.26
HMGA2-202ENST00000393577 ZBTB12Q9Y330 459 aaPredicted RBP29.2■■■□□ 2.26
HMGA2-202ENST00000393577 MED23Q9ULK4 1368 aa29.2■■■□□ 2.26
HMGA2-202ENST00000393577 CHRNDQ07001 517 aa29.19■■■□□ 2.26
HMGA2-202ENST00000393577 TAF7LQ5H9L4 462 aa29.19■■■□□ 2.26
HMGA2-202ENST00000393577 MAP1SQ66K74 1059 aaPredicted RBP29.19■■■□□ 2.26
HMGA2-202ENST00000393577 USP50Q70EL3 339 aaPredicted RBP29.19■■■□□ 2.26
HMGA2-202ENST00000393577 PSME4Q14997 1843 aa29.18■■■□□ 2.26
HMGA2-202ENST00000393577 ZNF594Q96JF6 807 aaPredicted RBP29.18■■■□□ 2.26
HMGA2-202ENST00000393577 LEMD3Q9Y2U8 911 aa29.18■■■□□ 2.26
HMGA2-202ENST00000393577 BICC1Q9H694 974 aaKnown RBP29.17■■■□□ 2.26
HMGA2-202ENST00000393577 SHTN1A0MZ66 631 aa29.16■■■□□ 2.26
HMGA2-202ENST00000393577 API5Q9BZZ5 524 aaKnown RBP29.16■■■□□ 2.26
HMGA2-202ENST00000393577 USP44Q9H0E7 712 aa29.16■■■□□ 2.26
HMGA2-202ENST00000393577 CNOT7Q9UIV1 285 aaKnown RBP29.16■■■□□ 2.26
HMGA2-202ENST00000393577 ZNF804BA4D1E1 1349 aa29.16■■■□□ 2.26
HMGA2-202ENST00000393577 PASKQ96RG2 1323 aa29.16■■■□□ 2.26
HMGA2-202ENST00000393577 ITGBL1O95965 494 aaPredicted RBP29.15■■■□□ 2.26
HMGA2-202ENST00000393577 KCNJ4P48050 445 aa29.15■■■□□ 2.26
HMGA2-202ENST00000393577 MICALL2Q8IY33 904 aa29.15■■■□□ 2.26
HMGA2-202ENST00000393577 CNTROBQ8N137 903 aa29.15■■■□□ 2.26
HMGA2-202ENST00000393577 DNAJC5GQ8N7S2 189 aa29.15■■■□□ 2.26
HMGA2-202ENST00000393577 KIF16BQ96L93 1317 aa29.15■■■□□ 2.26
HMGA2-202ENST00000393577 LDHAL6AQ6ZMR3 332 aa29.14■■■□□ 2.26
HMGA2-202ENST00000393577 HELBQ8NG08 1087 aaPredicted RBP29.14■■■□□ 2.26
HMGA2-202ENST00000393577 DPF2Q92785 391 aa29.14■■■□□ 2.26
HMGA2-202ENST00000393577 H7C1D1 291 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 TAF5LO75529 589 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 VIL1P09327 827 aaKnown RBP29.13■■■□□ 2.25
HMGA2-202ENST00000393577 RPS12P25398 132 aaKnown RBP29.13■■■□□ 2.25
HMGA2-202ENST00000393577 KLRK1P26718 216 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 RABL6Q3YEC7 729 aaPredicted RBP29.13■■■□□ 2.25
HMGA2-202ENST00000393577 PODNQ7Z5L7 613 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 TXNRD3Q86VQ6 643 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 ANKRD44Q8N8A2 993 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 TRPM4Q8TD43 1214 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 CNNM1Q9NRU3 951 aa29.13■■■□□ 2.25
HMGA2-202ENST00000393577 ZBED9Q6R2W3 1325 aa29.12■■■□□ 2.25
HMGA2-202ENST00000393577 SNAP23O00161 211 aa29.1■■■□□ 2.25
HMGA2-202ENST00000393577 KLRG1Q96E93 195 aa29.1■■■□□ 2.25
HMGA2-202ENST00000393577 COA1Q9GZY4 146 aa29.1■■■□□ 2.25
HMGA2-202ENST00000393577 BCAR3O75815 825 aa29.09■■■□□ 2.25
HMGA2-202ENST00000393577 HIRAP54198 1017 aaPredicted RBP29.09■■■□□ 2.25
HMGA2-202ENST00000393577 RSBN1LQ6PCB5 846 aaPredicted RBP29.09■■■□□ 2.25
HMGA2-202ENST00000393577 ARHGAP45Q92619 1136 aa29.09■■■□□ 2.25
HMGA2-202ENST00000393577 CREBZFQ9NS37 354 aa29.09■■■□□ 2.25
HMGA2-202ENST00000393577 USP17L3A6NCW0 530 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms