RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 NCOA3Q9Y6Q9 1424 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 CBFA2T2O43439 604 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.75□□□□□ -1.01
VTI1A-201ENST00000393077 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 FAM169AQ9Y6X4 670 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 BUB1BO60566 1050 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-201ENST00000393077 WDHD1O75717 1129 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-201ENST00000393077 ATRIPQ8WXE1 791 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 ITFG2Q969R8 447 aa8.75□□□□□ -1.01
VTI1A-201ENST00000393077 ENO4A6NNW6 628 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 ZEB2O60315 1214 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 F13A1P00488 732 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 CRYMQ14894 314 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 LRRC23Q53EV4 343 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 THUMPD2Q9BTF0 503 aaKnown RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 MAST1Q9Y2H9 1570 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 NPATQ14207 1427 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 H2AFXP16104 143 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 SNCBQ16143 134 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 CCDC148Q8NFR7 591 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 TFIP11Q9UBB9 837 aaKnown RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 HOOK1Q9UJC3 728 aaKnown RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 ANAPC4Q9UJX5 808 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 ZNF330Q9Y3S2 320 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 CDC42BPAQ5VT25 1732 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 PLA2R1Q13018 1463 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 BLMP54132 1417 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 TNRQ92752 1358 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 TUBBP07437 444 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 ZKSCAN1P17029 563 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 SYT1P21579 422 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 SLC8A1P32418 973 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 APOBRQ0VD83 1088 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 MSL1Q68DK7 614 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 RNF168Q8IYW5 571 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 MIPOL1Q8TD10 442 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 SSH1Q8WYL5 1049 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 CHCHD3Q9NX63 227 aaKnown RBP8.74□□□□□ -1.01
VTI1A-201ENST00000393077 ADGBQ8N7X0 1667 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 PREX2Q70Z35 1606 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 NCKAP5LQ9HCH0 1330 aa8.74□□□□□ -1.01
VTI1A-201ENST00000393077 CTAGE15A4D2H0 777 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 CCDC151A5D8V7 595 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 CTAGE8P0CG41 777 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 TOP1P11387 765 aaKnown RBP8.73□□□□□ -1.01
VTI1A-201ENST00000393077 CHMP4BP1P59074 171 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 CTAGE6Q86UF2 777 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 CTAGE4Q8IX94 777 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 G3BP2Q9UN86 482 aaKnown RBP8.73□□□□□ -1.01
VTI1A-201ENST00000393077 ABCC1P33527 1531 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 ATF3P18847 181 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 KIF5BP33176 963 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 SCRN1Q12765 414 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 RABGGTAQ92696 567 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 MPHOSPH8Q99549 860 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 GOLGA6CA6NDK9 693 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 USP27XA6NNY8 438 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 GOLGA6DP0CG33 693 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 TUBB4BP68371 445 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 ACTN3Q08043 901 aaPredicted RBP8.73□□□□□ -1.01
VTI1A-201ENST00000393077 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
VTI1A-201ENST00000393077 CCDC83Q8IWF9 413 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 ZBTB10Q96DT7 871 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 PARD6BQ9BYG5 372 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 GOLGA6AQ9NYA3 693 aa8.73□□□□□ -1.01
VTI1A-201ENST00000393077 CYP2E1P05181 493 aaPredicted RBP8.73□□□□□ -1.01
VTI1A-201ENST00000393077 ZRSR2Q15696 482 aaKnown RBP8.73□□□□□ -1.01
VTI1A-201ENST00000393077 INSRP06213 1382 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 FYB1O15117 783 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 SNUPNO95149 360 aaKnown RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 EIF2S2P20042 333 aaKnown RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 POLD1P28340 1107 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 GSCP56915 257 aaPredicted RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 TEFQ10587 303 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 TTC22Q5TAA0 569 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 API5Q9BZZ5 524 aaKnown RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 TRIM4Q9C037 500 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 KIF9Q9HAQ2 790 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 HYPKQ9NX55 129 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 GPRASP1Q5JY77 1395 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 ATP10AO60312 1499 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 UGGT1Q9NYU2 1555 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 GNAI1P63096 354 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 TSR1Q2NL82 804 aaKnown RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 LARP6Q9BRS8 491 aaKnown RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 TMPOP42166 694 aaKnown RBP8.72□□□□□ -1.01
VTI1A-201ENST00000393077 OLFM4Q6UX06 510 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 AOPEPQ8N6M6 819 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 STAG1Q8WVM7 1258 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 SWAP70Q9UH65 585 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 BAIAP2L1Q9UHR4 511 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 ZDHHC9Q9Y397 364 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 NLRP1Q9C000 1473 aa8.72□□□□□ -1.01
VTI1A-201ENST00000393077 AP1G2O75843 785 aa8.71□□□□□ -1.01
VTI1A-201ENST00000393077 TXLNAP40222 546 aa8.71□□□□□ -1.01
VTI1A-201ENST00000393077 RBM5P52756 815 aaKnown RBP eCLIP8.71□□□□□ -1.01
VTI1A-201ENST00000393077 MFSD4BQ5TF39 518 aa8.71□□□□□ -1.01
VTI1A-201ENST00000393077 FAM114A1Q8IWE2 563 aa8.71□□□□□ -1.01
VTI1A-201ENST00000393077 YIPF3Q9GZM5 350 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms