RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 KLK14Q9P0G3 267 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 FBXO2Q9UK22 296 aaPredicted RBP4.35□□□□□ -1.71
XRN1-202ENST00000392981 LZTS1Q9Y250 596 aa4.35□□□□□ -1.71
XRN1-202ENST00000392981 ALG1L2C9J202 215 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 TBX3O15119 743 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 NOS2P35228 1153 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 CDKN1CP49918 316 aaPredicted RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 EIF6P56537 245 aaKnown RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 TMPRSS15P98073 1019 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 ARMCX6Q7L4S7 300 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 NME8Q8N427 588 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 PDCD7Q8N8D1 485 aaKnown RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 CCDC34Q96HJ3 373 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 RAB6BQ9NRW1 208 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 UBP1Q9NZI7 540 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 SAP30BPQ9UHR5 308 aaKnown RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 EPB41L2O43491 1005 aaKnown RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 SETDB1Q15047 1291 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 TKFCQ3LXA3 575 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 NBPF6Q5VWK0 638 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 CCSAPQ6IQ19 270 aaPredicted RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 LYPD8Q6UX82 237 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 PNMA8AQ86V59 439 aaPredicted RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 CMTR1Q8N1G2 835 aaKnown RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 NBPF4Q96M43 638 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 PCGF6Q9BYE7 350 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 ZNF358Q9NW07 568 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 MRPS23Q9Y3D9 190 aaKnown RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 PARP3Q9Y6F1 533 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 NBNO60934 754 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 ZRANB2O95218 330 aaKnown RBP eCLIP4.34□□□□□ -1.71
XRN1-202ENST00000392981 FCGRTP55899 365 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 EXOSC10Q01780 885 aaKnown RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 CHAF1AQ13111 956 aaPredicted RBP4.34□□□□□ -1.71
XRN1-202ENST00000392981 STK3Q13188 491 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 ARSIQ5FYB1 569 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 RINLQ6ZS11 566 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 DRC7Q8IY82 874 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 NKD1Q969G9 470 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 E2F7Q96AV8 911 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 CNNM2Q9H8M5 875 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 FBRSQ9HAH7 460 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 ANAPC4Q9UJX5 808 aa4.34□□□□□ -1.71
XRN1-202ENST00000392981 EIF4G1Q04637 1599 aaKnown RBP4.34□□□□□ -1.72
XRN1-202ENST00000392981 F5H423 210 aaPredicted RBP4.34□□□□□ -1.72
XRN1-202ENST00000392981 ZBTB7BO15156 539 aaPredicted RBP4.34□□□□□ -1.72
XRN1-202ENST00000392981 FOXO3O43524 673 aa4.34□□□□□ -1.72
XRN1-202ENST00000392981 EIF4A3P38919 411 aaKnown RBP4.34□□□□□ -1.72
XRN1-202ENST00000392981 GET4Q7L5D6 327 aaPredicted RBP4.34□□□□□ -1.72
XRN1-202ENST00000392981 GOLM1Q8NBJ4 401 aa4.34□□□□□ -1.72
XRN1-202ENST00000392981 GMLQ99445 158 aa4.34□□□□□ -1.72
XRN1-202ENST00000392981 FIBPO43427 364 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 PDE8AO60658 829 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 POU5F1BQ06416 359 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 PWP1Q13610 501 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 DTHD1Q6ZMT9 781 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 ZNF438Q7Z4V0 828 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 ZNF296Q8WUU4 475 aaPredicted RBP4.33□□□□□ -1.72
XRN1-202ENST00000392981 C12orf49Q9H741 205 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 FAM8A1Q9UBU6 413 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 FZD6O60353 706 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 CCNYL3P0C7X3 344 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 TNNI3KQ59H18 835 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 SAMD7Q7Z3H4 446 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 YIPF4Q9BSR8 244 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.33□□□□□ -1.72
XRN1-202ENST00000392981 USP25Q9UHP3 1055 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 DCAF1Q9Y4B6 1507 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 ENPP3O14638 875 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 TNNT2P45379 298 aaPredicted RBP4.33□□□□□ -1.72
XRN1-202ENST00000392981 EPHB1P54762 984 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 NIM1KQ8IY84 436 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 TRPM4Q8TD43 1214 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 SEC16BQ96JE7 1060 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 CBX8Q9HC52 389 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 PTCH2Q9Y6C5 1203 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 ZCCHC6Q5VYS8 1495 aaKnown RBP4.33□□□□□ -1.72
XRN1-202ENST00000392981 COPB2P35606 906 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 GEMIN4P57678 1058 aaKnown RBP4.33□□□□□ -1.72
XRN1-202ENST00000392981 PDE1CQ14123 709 aaPredicted RBP4.33□□□□□ -1.72
XRN1-202ENST00000392981 FXNQ16595 210 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 PLEKHG4Q58EX7 1191 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 TPTE2Q6XPS3 522 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 USP7Q93009 1102 aa4.33□□□□□ -1.72
XRN1-202ENST00000392981 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.33□□□□□ -1.72
XRN1-202ENST00000392981 VSTM5A8MXK1 200 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 AGRPO00253 132 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 BDNFP23560 247 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 LILRB2Q8N423 598 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 EHD4Q9H223 541 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 SNUPNO95149 360 aaKnown RBP4.32□□□□□ -1.72
XRN1-202ENST00000392981 GDF10P55107 478 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 PASD1Q8IV76 773 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 IFT43Q96FT9 208 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 TSR3Q9UJK0 312 aaKnown RBP4.32□□□□□ -1.72
XRN1-202ENST00000392981 LUC7L2Q9Y383 392 aaKnown RBP4.32□□□□□ -1.72
XRN1-202ENST00000392981 IGFBP4P22692 258 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 GFOD2Q3B7J2 385 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 COBLL1Q53SF7 1204 aa4.32□□□□□ -1.72
XRN1-202ENST00000392981 PDXDC2PQ6P474 469 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms