RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 UPF2Q9HAU5 1272 aaKnown RBP22.79■■□□□ 1.24
CCDC50-202ENST00000392456 BCL2L12Q9HB09 334 aa22.79■■□□□ 1.24
CCDC50-202ENST00000392456 CSF1RP07333 972 aa22.78■■□□□ 1.24
CCDC50-202ENST00000392456 MYRIPQ8NFW9 859 aa22.78■■□□□ 1.24
CCDC50-202ENST00000392456 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
CCDC50-202ENST00000392456 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
CCDC50-202ENST00000392456 LY75O60449 1722 aa22.77■■□□□ 1.24
CCDC50-202ENST00000392456 CDC45O75419 566 aa22.77■■□□□ 1.24
CCDC50-202ENST00000392456 RXRBP28702 533 aa22.77■■□□□ 1.24
CCDC50-202ENST00000392456 PSEN1P49768 467 aa22.77■■□□□ 1.24
CCDC50-202ENST00000392456 TTLL11Q8NHH1 800 aa22.77■■□□□ 1.24
CCDC50-202ENST00000392456 CDHR2Q9BYE9 1310 aa22.77■■□□□ 1.24
CCDC50-202ENST00000392456 USPL1Q5W0Q7 1092 aa22.76■■□□□ 1.23
CCDC50-202ENST00000392456 POTEAQ6S8J7 498 aa22.76■■□□□ 1.23
CCDC50-202ENST00000392456 CNPY4Q8N129 248 aa22.76■■□□□ 1.23
CCDC50-202ENST00000392456 PROM2Q8N271 834 aa22.76■■□□□ 1.23
CCDC50-202ENST00000392456 ARHGEF1Q92888 912 aaKnown RBP22.76■■□□□ 1.23
CCDC50-202ENST00000392456 GREM2Q9H772 168 aa22.76■■□□□ 1.23
CCDC50-202ENST00000392456 PHF14O94880 888 aa22.75■■□□□ 1.23
CCDC50-202ENST00000392456 IFIT2P09913 472 aaKnown RBP22.75■■□□□ 1.23
CCDC50-202ENST00000392456 BICDL1Q6ZP65 573 aa22.75■■□□□ 1.23
CCDC50-202ENST00000392456 RILPL2Q969X0 211 aa22.75■■□□□ 1.23
CCDC50-202ENST00000392456 RTCBQ9Y3I0 505 aaKnown RBP22.75■■□□□ 1.23
CCDC50-202ENST00000392456 TRIM6-TRIM34B2RNG4 842 aa22.74■■□□□ 1.23
CCDC50-202ENST00000392456 CCDC57Q2TAC2 916 aa22.74■■□□□ 1.23
CCDC50-202ENST00000392456 UTP14AQ9BVJ6 771 aaKnown RBP22.74■■□□□ 1.23
CCDC50-202ENST00000392456 CLGNO14967 610 aa22.74■■□□□ 1.23
CCDC50-202ENST00000392456 NTSR2O95665 410 aa22.74■■□□□ 1.23
CCDC50-202ENST00000392456 CTSWP56202 376 aa22.74■■□□□ 1.23
CCDC50-202ENST00000392456 TBC1D9BQ66K14 1250 aa22.74■■□□□ 1.23
CCDC50-202ENST00000392456 ZKSCAN5Q9Y2L8 839 aa22.74■■□□□ 1.23
CCDC50-202ENST00000392456 MCM5P33992 734 aa22.73■■□□□ 1.23
CCDC50-202ENST00000392456 ZNF771Q7L3S4 317 aaPredicted RBP22.73■■□□□ 1.23
CCDC50-202ENST00000392456 TAF1LQ8IZX4 1826 aa22.73■■□□□ 1.23
CCDC50-202ENST00000392456 IGSF3O75054 1194 aa22.73■■□□□ 1.23
CCDC50-202ENST00000392456 CLEC4GQ6UXB4 293 aa22.73■■□□□ 1.23
CCDC50-202ENST00000392456 SPRYD3Q8NCJ5 442 aa22.73■■□□□ 1.23
CCDC50-202ENST00000392456 SH3TC1Q8TE82 1336 aa22.73■■□□□ 1.23
CCDC50-202ENST00000392456 USP42Q9H9J4 1324 aaKnown RBP22.72■■□□□ 1.23
CCDC50-202ENST00000392456 EYA2O00167 538 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 HOMEZQ8IX15 550 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 FBXO41Q8TF61 875 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 NARFQ9UHQ1 456 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 PDE8AO60658 829 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 ITGA6P23229 1130 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 TNNI3KQ59H18 835 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 DBNLQ9UJU6 430 aaKnown RBP22.72■■□□□ 1.23
CCDC50-202ENST00000392456 FPGT-TNNI3KV9GXZ4 949 aa22.72■■□□□ 1.23
CCDC50-202ENST00000392456 AOX1Q06278 1338 aa22.71■■□□□ 1.23
CCDC50-202ENST00000392456 IFIT5Q13325 482 aaKnown RBP22.71■■□□□ 1.23
CCDC50-202ENST00000392456 SKOR2Q2VWA4 1001 aaPredicted RBP22.71■■□□□ 1.23
CCDC50-202ENST00000392456 PARP10Q53GL7 1025 aa22.71■■□□□ 1.23
CCDC50-202ENST00000392456 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
CCDC50-202ENST00000392456 C22orf23Q9BZE7 217 aa22.71■■□□□ 1.23
CCDC50-202ENST00000392456 TUBGCP6Q96RT7 1819 aa22.7■■□□□ 1.22
CCDC50-202ENST00000392456 TIMM10P62072 90 aa22.7■■□□□ 1.22
CCDC50-202ENST00000392456 PDLIM2Q96JY6 352 aa22.7■■□□□ 1.22
CCDC50-202ENST00000392456 AK7Q96M32 723 aa22.7■■□□□ 1.22
CCDC50-202ENST00000392456 C4BP0C0L5 1744 aa22.7■■□□□ 1.22
CCDC50-202ENST00000392456 TTC41PQ6P2S7 1318 aa22.69■■□□□ 1.22
CCDC50-202ENST00000392456 GTF2F1P35269 517 aaKnown RBP eCLIP22.69■■□□□ 1.22
CCDC50-202ENST00000392456 DBNDD2Q9BQY9 259 aa22.69■■□□□ 1.22
CCDC50-202ENST00000392456 ZPR1O75312 459 aa22.69■■□□□ 1.22
CCDC50-202ENST00000392456 IL15P40933 162 aaPredicted RBP22.69■■□□□ 1.22
CCDC50-202ENST00000392456 YY1AP1Q9H869 796 aa22.69■■□□□ 1.22
CCDC50-202ENST00000392456 BCORQ6W2J9 1755 aa22.68■■□□□ 1.22
CCDC50-202ENST00000392456 TXNRD1Q16881 649 aa22.68■■□□□ 1.22
CCDC50-202ENST00000392456 ERFEQ4G0M1 354 aa22.68■■□□□ 1.22
CCDC50-202ENST00000392456 TRAPPC3LQ5T215 181 aa22.68■■□□□ 1.22
CCDC50-202ENST00000392456 C3orf67Q6ZVT6 689 aa22.68■■□□□ 1.22
CCDC50-202ENST00000392456 SEC31BQ9NQW1 1179 aa22.68■■□□□ 1.22
CCDC50-202ENST00000392456 SPDYE4A6NLX3 237 aa22.67■■□□□ 1.22
CCDC50-202ENST00000392456 GLRX3O76003 335 aaKnown RBP22.67■■□□□ 1.22
CCDC50-202ENST00000392456 CCDC24Q8N4L8 307 aa22.67■■□□□ 1.22
CCDC50-202ENST00000392456 CNKSR2Q8WXI2 1034 aa22.67■■□□□ 1.22
CCDC50-202ENST00000392456 IL25Q9H293 177 aa22.67■■□□□ 1.22
CCDC50-202ENST00000392456 BOLA2Q9H3K6 86 aa22.67■■□□□ 1.22
CCDC50-202ENST00000392456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.67■■□□□ 1.22
CCDC50-202ENST00000392456 TULP2O00295 520 aa22.66■■□□□ 1.22
CCDC50-202ENST00000392456 CIAO1O76071 339 aa22.66■■□□□ 1.22
CCDC50-202ENST00000392456 CHMLP26374 656 aa22.66■■□□□ 1.22
CCDC50-202ENST00000392456 NDUFB9Q9Y6M9 179 aa22.66■■□□□ 1.22
CCDC50-202ENST00000392456 APBA3O96018 575 aa22.66■■□□□ 1.22
CCDC50-202ENST00000392456 MYCNP04198 464 aaPredicted RBP22.66■■□□□ 1.22
CCDC50-202ENST00000392456 RFC4P35249 363 aa22.66■■□□□ 1.22
CCDC50-202ENST00000392456 NEUROD6Q96NK8 337 aa22.66■■□□□ 1.22
CCDC50-202ENST00000392456 ANKRD18BA2A2Z9 1011 aa22.65■■□□□ 1.22
CCDC50-202ENST00000392456 SLC27A3Q5K4L6 730 aa22.65■■□□□ 1.22
CCDC50-202ENST00000392456 LDHAL6AQ6ZMR3 332 aa22.65■■□□□ 1.22
CCDC50-202ENST00000392456 TSC1Q92574 1164 aa22.65■■□□□ 1.22
CCDC50-202ENST00000392456 RIPOR2Q9Y4F9 1068 aa22.65■■□□□ 1.22
CCDC50-202ENST00000392456 ERC2O15083 957 aa22.65■■□□□ 1.22
CCDC50-202ENST00000392456 CAPN2P17655 700 aa22.65■■□□□ 1.22
CCDC50-202ENST00000392456 EDC3Q96F86 508 aaKnown RBP22.65■■□□□ 1.22
CCDC50-202ENST00000392456 GEMIN8Q9NWZ8 242 aaKnown RBP22.64■■□□□ 1.21
CCDC50-202ENST00000392456 MYH3P11055 1940 aa22.64■■□□□ 1.21
CCDC50-202ENST00000392456 GPATCH3Q96I76 525 aa22.64■■□□□ 1.21
CCDC50-202ENST00000392456 SETDB2Q96T68 719 aa22.63■■□□□ 1.21
CCDC50-202ENST00000392456 SCN7AQ01118 1682 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms