RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 H3BQV1 296 aa23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 IFFO2Q5TF58 517 aa23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 ANKRD7Q92527 254 aa23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 C16orf45Q96MC5 204 aaPredicted RBP23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 ADD1P35611 737 aaKnown RBP23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 SLFNL1Q499Z3 407 aa23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 DDX46Q7L014 1031 aaKnown RBP23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 CACTINQ8WUQ7 758 aaKnown RBP23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 SLIT3O75094 1523 aa23.18■■□□□ 1.3
TUBA4A-202ENST00000392088 PDCL2Q8N4E4 241 aa23.17■■□□□ 1.3
TUBA4A-202ENST00000392088 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
TUBA4A-202ENST00000392088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.17■■□□□ 1.3
TUBA4A-202ENST00000392088 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.17■■□□□ 1.3
TUBA4A-202ENST00000392088 U3KPZ7 1027 aaPredicted RBP23.17■■□□□ 1.3
TUBA4A-202ENST00000392088 C11orf57Q6ZUT1 292 aaPredicted RBP23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 LRP10Q7Z4F1 713 aa23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 SMARCC2Q8TAQ2 1214 aa23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 CLIP2Q9UDT6 1046 aa23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 CCDC9Q9Y3X0 531 aaKnown RBP23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 IQCB1Q15051 598 aa23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 MCMDC2Q4G0Z9 681 aa23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 UBE3BQ7Z3V4 1068 aa23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 NFATC2IPQ8NCF5 419 aa23.16■■□□□ 1.3
TUBA4A-202ENST00000392088 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 ZSCAN20P17040 1043 aaPredicted RBP23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 ANKRD13DQ6ZTN6 518 aa23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 ZNF496Q96IT1 587 aaPredicted RBP23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 ZSCAN16Q9H4T2 348 aaPredicted RBP23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 USP16Q9Y5T5 823 aa23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 SCN11AQ9UI33 1791 aa23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 A0A087WWV3 80 aa23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 CTDNEP1O95476 244 aa23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 GOLPH3LQ9H4A5 285 aa23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 SLC52A2Q9HAB3 445 aa23.15■■□□□ 1.3
TUBA4A-202ENST00000392088 NSUN7Q8NE18 718 aaKnown RBP23.14■■□□□ 1.29
TUBA4A-202ENST00000392088 HAUS7Q99871 368 aa23.14■■□□□ 1.29
TUBA4A-202ENST00000392088 A0A0G2JLW4 131 aa23.14■■□□□ 1.29
TUBA4A-202ENST00000392088 SPDYE4A6NLX3 237 aa23.14■■□□□ 1.29
TUBA4A-202ENST00000392088 ATP5J2-PTCD1G3V325 749 aa23.14■■□□□ 1.29
TUBA4A-202ENST00000392088 PTCD1O75127 700 aaKnown RBP23.14■■□□□ 1.29
TUBA4A-202ENST00000392088 CFAP45Q9UL16 551 aa23.14■■□□□ 1.29
TUBA4A-202ENST00000392088 PFKFB2O60825 505 aa23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 PPFIA3O75145 1194 aa23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 ARID5BQ14865 1188 aa23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 TNNT1P13805 278 aa23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 U2AF2P26368 475 aaKnown RBP eCLIP23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 APOBRQ0VD83 1088 aa23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 RABL6Q3YEC7 729 aaPredicted RBP23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 CCAR1Q8IX12 1150 aaKnown RBP23.13■■□□□ 1.29
TUBA4A-202ENST00000392088 RFX7Q2KHR2 1363 aa23.12■■□□□ 1.29
TUBA4A-202ENST00000392088 FGD1P98174 961 aa23.11■■□□□ 1.29
TUBA4A-202ENST00000392088 NCBP1Q09161 790 aaKnown RBP23.11■■□□□ 1.29
TUBA4A-202ENST00000392088 RCOR1Q9UKL0 485 aa23.11■■□□□ 1.29
TUBA4A-202ENST00000392088 USP28Q96RU2 1077 aa23.11■■□□□ 1.29
TUBA4A-202ENST00000392088 CCT2P78371 535 aaKnown RBP23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 SNW1Q13573 536 aaKnown RBP23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 ERBB3P21860 1342 aa23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 PTPDC1A2A3K4 754 aa23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 CDC25BP30305 580 aa23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 DMTNQ08495 405 aa23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 NAA30Q147X3 362 aaPredicted RBP23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 KBTBD3Q8NAB2 608 aa23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 NCOA5Q9HCD5 579 aaKnown RBP23.1■■□□□ 1.29
TUBA4A-202ENST00000392088 SMTNL1A8MU46 457 aa23.09■■□□□ 1.29
TUBA4A-202ENST00000392088 DHX32Q7L7V1 743 aaKnown RBP23.09■■□□□ 1.29
TUBA4A-202ENST00000392088 LLPHQ9BRT6 129 aaKnown RBP23.09■■□□□ 1.29
TUBA4A-202ENST00000392088 LMTK3Q96Q04 1460 aa23.09■■□□□ 1.29
TUBA4A-202ENST00000392088 A0A087WZG4 1122 aa23.09■■□□□ 1.29
TUBA4A-202ENST00000392088 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
TUBA4A-202ENST00000392088 ARFGEF2Q9Y6D5 1785 aa23.09■■□□□ 1.29
TUBA4A-202ENST00000392088 GOLGA6L19H0YKK7 550 aa23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 PHKG2P15735 406 aa23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 GUCY1B3Q02153 619 aa23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 NAA16Q6N069 864 aaPredicted RBP23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 SARM1Q6SZW1 724 aa23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 SH3TC1Q8TE82 1336 aa23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 CASP7P55210 303 aa23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 TPD52L1Q16890 204 aaPredicted RBP23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 LRRC8AQ8IWT6 810 aa23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 ERCC4Q92889 916 aaPredicted RBP23.08■■□□□ 1.29
TUBA4A-202ENST00000392088 USP27XA6NNY8 438 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 GOLIM4O00461 696 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 CAVIN2O95810 425 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 EXOSC10Q01780 885 aaKnown RBP23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 ILDR1Q86SU0 546 aaPredicted RBP23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 ANKLE2Q86XL3 938 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 STX1AQ16623 288 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 LMBR1LQ6UX01 489 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 ENGASEQ8NFI3 743 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 RAPGEF4Q8WZA2 1011 aa23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 ZHX1Q9UKY1 873 aaPredicted RBP23.07■■□□□ 1.28
TUBA4A-202ENST00000392088 CHST3Q7LGC8 479 aa23.06■■□□□ 1.28
TUBA4A-202ENST00000392088 DHX40Q8IX18 779 aaKnown RBP23.06■■□□□ 1.28
TUBA4A-202ENST00000392088 TRPM3Q9HCF6 1732 aaPredicted RBP23.06■■□□□ 1.28
TUBA4A-202ENST00000392088 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
TUBA4A-202ENST00000392088 MRFAP1L1Q96HT8 127 aa23.05■■□□□ 1.28
TUBA4A-202ENST00000392088 NEUROD6Q96NK8 337 aa23.05■■□□□ 1.28
TUBA4A-202ENST00000392088 AGXT2Q9BYV1 514 aa23.05■■□□□ 1.28
TUBA4A-202ENST00000392088 BCL11BQ9C0K0 894 aaPredicted RBP23.05■■□□□ 1.28
TUBA4A-202ENST00000392088 NLRP2Q9NX02 1062 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms