RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 PPM1EQ8WY54 764 aa19.55■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SLC27A2O14975 620 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 NBPF7P0C2Y1 421 aaPredicted RBP19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 FKBP4Q02790 459 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 KRT32Q14532 448 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 KLHDC4Q8TBB5 520 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 ATP1A3P13637 1013 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 PGBD1Q96JS3 809 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CEP170Q5SW79 1584 aa19.54■□□□□ 0.72
TRAF3IP1-202ENST00000391993 ZNF518AQ6AHZ1 1483 aa19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 PLA2G4AP47712 749 aa19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 RRP12Q5JTH9 1297 aaKnown RBP19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 NLRP6P59044 892 aa19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 TMEM87AQ8NBN3 555 aa19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 FAM212AQ96EL1 285 aa19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 LSG1Q9H089 658 aaKnown RBP19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 EFCC1Q9HA90 598 aa19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 POLR1AO95602 1720 aaPredicted RBP19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 GPIHBP1Q8IV16 184 aa19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 TRMT44Q8IYL2 757 aaKnown RBP19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 BICC1Q9H694 974 aaKnown RBP19.53■□□□□ 0.72
TRAF3IP1-202ENST00000391993 SEC62Q99442 399 aaKnown RBP19.52■□□□□ 0.72
TRAF3IP1-202ENST00000391993 GBP6Q6ZN66 633 aa19.52■□□□□ 0.72
TRAF3IP1-202ENST00000391993 JMYQ8N9B5 988 aa19.52■□□□□ 0.72
TRAF3IP1-202ENST00000391993 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
TRAF3IP1-202ENST00000391993 FRMD3A2A2Y4 597 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 SPTLC2O15270 562 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ZMYND10O75800 440 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 NUP88Q99567 741 aaPredicted RBP19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 NSD2O96028 1365 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 EFCAB8A8MWE9 144 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ERLIN2O94905 339 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 RXRAP19793 462 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 SAFBQ15424 915 aaKnown RBP eCLIP19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CCDC148Q8NFR7 591 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 GUCA1BQ9UMX6 200 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 RPAP1Q9BWH6 1393 aaPredicted RBP19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 KIAA1328Q86T90 577 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 RGS22Q8NE09 1264 aa19.51■□□□□ 0.71
TRAF3IP1-202ENST00000391993 GOLGA8BA8MQT2 603 aa19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 GPR161Q8N6U8 529 aaKnown RBP19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 EIF3CLB5ME19 914 aaKnown RBP19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 IDI1Q13907 227 aa19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 EIF3CQ99613 913 aaKnown RBP19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CCDC175P0C221 793 aa19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CCT5P48643 541 aa19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 DHX58Q96C10 678 aa19.5■□□□□ 0.71
TRAF3IP1-202ENST00000391993 RPS6KB1P23443 525 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 PDE6BP35913 854 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 EIF4A2Q14240 407 aaKnown RBP19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ODF2Q5BJF6 829 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ATRIPQ8WXE1 791 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ZNF446Q9NWS9 450 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 EIF2AK4Q9P2K8 1649 aaKnown RBP19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 PRDM15P57071 1507 aaPredicted RBP19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 EP400NLQ6ZTU2 488 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 SNRKQ9NRH2 765 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 MYCNP04198 464 aaPredicted RBP19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 E4F1Q66K89 784 aaPredicted RBP19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 FAM204AQ9H8W3 233 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 PPP2R2CQ9Y2T4 447 aa19.49■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CWF19L2Q2TBE0 894 aaKnown RBP19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CCDC158Q5M9N0 1113 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 OTUD6BQ8N6M0 293 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 AFAP1L1Q8TED9 768 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 FHOD1Q9Y613 1164 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 MTHFSDQ2M296 383 aaKnown RBP19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CCDC181Q5TID7 509 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CC2D1AQ6P1N0 951 aaPredicted RBP19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 JADE2Q9NQC1 790 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 BCCIPQ9P287 314 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CTAGE9A4FU28 777 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 AFMP43652 599 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 SCLT1Q96NL6 688 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ECM2O94769 699 aaPredicted RBP19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 NDUFA8P51970 172 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ZNF827Q17R98 1081 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 SRLQ86TD4 932 aa19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 IRX2Q9BZI1 471 aaPredicted RBP19.48■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ELP1O95163 1332 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 GOLIM4O00461 696 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 IL13P35225 146 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 SUGCTQ9HAC7 445 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CHPF2Q9P2E5 772 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 SAMM50Q9Y512 469 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ZNF202O95125 648 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 NF2P35240 595 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CCZ1BP86790 482 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 CCZ1P86791 482 aaPredicted RBP19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ATP2B2Q01814 1243 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 OSBPL3Q9H4L5 887 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 TRAPPC8Q9Y2L5 1435 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 MYL5Q02045 173 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 ZSWIM6Q9HCJ5 1215 aa19.47■□□□□ 0.71
TRAF3IP1-202ENST00000391993 A0A0D9SFI3 127 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms