RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 C12orf49Q9H741 205 aa5.15□□□□□ -1.59
PTPRC-205ENST00000391970 NXF1Q9UBU9 619 aaKnown RBP5.15□□□□□ -1.59
PTPRC-205ENST00000391970 A0A1W2PP55 124 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 SCAMP3O14828 347 aaKnown RBP5.14□□□□□ -1.59
PTPRC-205ENST00000391970 GADD45BO75293 160 aaPredicted RBP5.14□□□□□ -1.59
PTPRC-205ENST00000391970 CTSHP09668 335 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 EIF4BP23588 611 aaKnown RBP5.14□□□□□ -1.59
PTPRC-205ENST00000391970 NRLP54845 237 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 GPLD1P80108 840 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 HYAL2Q12891 473 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 GAS6Q14393 721 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 GRM2Q14416 872 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 COL13A1Q5TAT6 717 aaPredicted RBP5.14□□□□□ -1.59
PTPRC-205ENST00000391970 ZNF468Q5VIY5 522 aaPredicted RBP5.14□□□□□ -1.59
PTPRC-205ENST00000391970 KIAA0319Q5VV43 1072 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 SYT9Q86SS6 491 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 NPAS3Q8IXF0 933 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 BCO2Q9BYV7 579 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 SRCIN1Q9C0H9 1055 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 LATS2Q9NRM7 1088 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 PRR12Q9ULL5 1215 aa5.14□□□□□ -1.59
PTPRC-205ENST00000391970 H3BM21 787 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 BMP4P12644 408 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 MX2P20592 715 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 NXPE4Q6UWF7 544 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 NCAPG2Q86XI2 1143 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 TMEM87AQ8NBN3 555 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 GLIS3Q8NEA6 775 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 TRPM4Q8TD43 1214 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 CNTNAP3BQ96NU0 1288 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 NSUN5Q96P11 429 aaKnown RBP5.13□□□□□ -1.59
PTPRC-205ENST00000391970 CNTNAP3Q9BZ76 1288 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 AVENQ9NQS1 362 aaPredicted RBP5.13□□□□□ -1.59
PTPRC-205ENST00000391970 FAM8A1Q9UBU6 413 aa5.13□□□□□ -1.59
PTPRC-205ENST00000391970 ZBTB42B2RXF5 422 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 SIN3BO75182 1162 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 USP17L7P0C7H9 530 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 VSIG8P0DPA2 414 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 ACPPP15309 386 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 PRPF40BQ6NWY9 871 aaKnown RBP5.12□□□□□ -1.59
PTPRC-205ENST00000391970 GPR161Q8N6U8 529 aaKnown RBP5.12□□□□□ -1.59
PTPRC-205ENST00000391970 CEP120Q8N960 986 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 ZKSCAN3Q9BRR0 538 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 EHD4Q9H223 541 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 METTL5Q9NRN9 209 aaKnown RBP5.12□□□□□ -1.59
PTPRC-205ENST00000391970 TRAK1Q9UPV9 953 aa5.12□□□□□ -1.59
PTPRC-205ENST00000391970 LOC102724428A0A0B4J2F2 783 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 ARAFP10398 606 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 SIK1P57059 783 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 PCBP4P57723 403 aaKnown RBP5.11□□□□□ -1.59
PTPRC-205ENST00000391970 HDLBPQ00341 1268 aaKnown RBP5.11□□□□□ -1.59
PTPRC-205ENST00000391970 FANCCQ00597 558 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 MLLT1Q03111 559 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-205ENST00000391970 TNFRSF25Q93038 417 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 TCF12Q99081 682 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 OSMRQ99650 979 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 UBE2OQ9C0C9 1292 aaKnown RBP5.11□□□□□ -1.59
PTPRC-205ENST00000391970 MBIPQ9NS73 344 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 DZANK1Q9NVP4 752 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 DNAJB12Q9NXW2 375 aaKnown RBP5.11□□□□□ -1.59
PTPRC-205ENST00000391970 KLF15Q9UIH9 416 aa5.11□□□□□ -1.59
PTPRC-205ENST00000391970 J3QW42 95 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 NFKBIEO00221 500 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 ADH6P28332 368 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 GSTT1P30711 240 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 ZNF76P36508 570 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 MAP2K3P46734 347 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 TBC1D8BQ0IIM8 1120 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 PCSK7Q16549 785 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 MEI1Q5TIA1 1274 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 METTL16Q86W50 562 aaKnown RBP5.1□□□□□ -1.59
PTPRC-205ENST00000391970 CCNJLQ8IV13 435 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 C3orf58Q8NDZ4 430 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 SPACA7Q96KW9 195 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 MDFIQ99750 246 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 IGFLR1Q9H665 355 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 LIN7BQ9HAP6 207 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 ABCB6Q9NP58 842 aa5.1□□□□□ -1.59
PTPRC-205ENST00000391970 USP31Q70CQ4 1352 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 TMEM238LA0A1B0GVL6 79 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 ADARB2-AS1A8MUL3 147 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 TRPA1O75762 1119 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 ST13P50502 369 aaKnown RBP5.09□□□□□ -1.59
PTPRC-205ENST00000391970 TAF1CQ15572 869 aaPredicted RBP5.09□□□□□ -1.59
PTPRC-205ENST00000391970 RNFT1Q5M7Z0 435 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 HFE2Q6ZVN8 426 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 FCHSD1Q86WN1 690 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 TMEM102Q8N9M5 508 aaPredicted RBP5.09□□□□□ -1.59
PTPRC-205ENST00000391970 RNF34Q969K3 372 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 HHIPQ96QV1 700 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 OXCT2Q9BYC2 517 aaPredicted RBP5.09□□□□□ -1.59
PTPRC-205ENST00000391970 PBX4Q9BYU1 374 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 BHLHE41Q9C0J9 482 aaPredicted RBP5.09□□□□□ -1.59
PTPRC-205ENST00000391970 RASSF4Q9H2L5 321 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 PPP4R2Q9NY27 417 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 NAGPAQ9UK23 515 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 SLC6A14Q9UN76 642 aa5.09□□□□□ -1.59
PTPRC-205ENST00000391970 NSFL1CQ9UNZ2 370 aaKnown RBP5.09□□□□□ -1.59
PTPRC-205ENST00000391970 IGF1RP08069 1367 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms