RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 RAB34Q9BZG1 259 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 LARSQ9P2J5 1176 aaKnown RBP13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 HIP1RO75146 1068 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 RHOXF2BP0C7M4 288 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 KRT13P13646 458 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 PHEXP78562 749 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 RHOXF2Q9BQY4 288 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 ZNF652Q9Y2D9 606 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 HPDP32754 393 aaPredicted RBP13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 CAVIN4Q5BKX8 364 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 CCDC62Q6P9F0 684 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 BICDL1Q6ZP65 573 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 CHD1LQ86WJ1 897 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 CCDC186Q7Z3E2 898 aa13.98□□□□□ -0.17
SMARCA2-209ENST00000382203 IDH1O75874 414 aaKnown RBP13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 SLC8A1P32418 973 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 CHMP4BP1P59074 171 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 PPP1R9AQ9ULJ8 1098 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 FAN1Q9Y2M0 1017 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 RIPOR2Q9Y4F9 1068 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 PDCD2Q16342 344 aaPredicted RBP13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 CNPY4Q8N129 248 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 SRGAP3O43295 1099 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 HVCN1Q96D96 273 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 MTRF1LQ9UGC7 380 aaKnown RBP13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 BIN1O00499 593 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 THEGQ9P2T0 379 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 CALCOCO2Q13137 446 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 BICD1Q96G01 975 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 PRAM1Q96QH2 718 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 MKNK2Q9HBH9 465 aa13.97□□□□□ -0.17
SMARCA2-209ENST00000382203 STARD3NLO95772 234 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 RAP1GDS1P52306 607 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 SCINQ9Y6U3 715 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 FCHSD2O94868 740 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 PRPHP41219 470 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 CDK19Q9BWU1 502 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 TXNDC16Q9P2K2 825 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 CAPN7Q9Y6W3 813 aa13.96□□□□□ -0.17
SMARCA2-209ENST00000382203 SSFA2P28290 1259 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 IRX4P78413 519 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 TCERG1LQ5VWI1 586 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 PPFIA3O75145 1194 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 HGSO14964 777 aaPredicted RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 BAG4O95429 457 aaKnown RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 ATP5DP30049 168 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 LONP1P36776 959 aaKnown RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 CCDC122Q5T0U0 273 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 N4BP3O15049 544 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 ZFXP17010 805 aaPredicted RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 USP37Q86T82 979 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 FSIP1Q8NA03 581 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 GOLGA6CA6NDK9 693 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 BCAR3O75815 825 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 GOLGA6DP0CG33 693 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 PCYT1AP49585 367 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 RABEP2Q9H5N1 569 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 PALMDQ9NP74 551 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 GOLGA6AQ9NYA3 693 aa13.95□□□□□ -0.18
SMARCA2-209ENST00000382203 ZSCAN26Q16670 478 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 GSTA5Q7RTV2 222 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 RSPH3Q86UC2 560 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 SLF2Q8IX21 1173 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 UBLCP1Q8WVY7 318 aaPredicted RBP13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 Q9H521 79 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 HCLS1P14317 486 aaPredicted RBP13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 NUDCD3Q8IVD9 361 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 ANLNQ9NQW6 1124 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■□ 21.7
SMARCA2-209ENST00000382203 PPP2R3AQ06190 1150 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 CLUL1Q15846 466 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 THEMISQ8N1K5 641 aaPredicted RBP13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 CCDC25Q86WR0 208 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
SMARCA2-209ENST00000382203 MRPL46Q9H2W6 279 aaKnown RBP13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 SNX16P57768 344 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 NCAPGQ9BPX3 1015 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 BCAP29Q9UHQ4 241 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 ANKRD50Q9ULJ7 1429 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 ZPR1O75312 459 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 UBASH3AP57075 661 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 CCDC14Q49A88 953 aa13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 TTLL12Q14166 644 aaPredicted RBP13.93□□□□□ -0.18
SMARCA2-209ENST00000382203 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms