RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ZSCAN16Q9H4T2 348 aaPredicted RBP21.99■■□□□ 1.11
SMARCD1-201ENST00000381513 RBM8AQ9Y5S9 174 aaKnown RBP21.99■■□□□ 1.11
SMARCD1-201ENST00000381513 CCDC151A5D8V7 595 aa21.99■■□□□ 1.11
SMARCD1-201ENST00000381513 TADA2BQ86TJ2 420 aa21.99■■□□□ 1.11
SMARCD1-201ENST00000381513 PUF60Q9UHX1 559 aaKnown RBP21.99■■□□□ 1.11
SMARCD1-201ENST00000381513 MYO3AQ8NEV4 1616 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 PSMA5P28066 241 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 DPCR1Q3MIW9 517 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 HDXQ7Z353 690 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 CNNM3Q8NE01 707 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 TM6SF1Q9BZW5 370 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 SUGCTQ9HAC7 445 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 FANCAO15360 1455 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 CREB3L3Q68CJ9 461 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 EFCAB13Q8IY85 973 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 MPHOSPH8Q99549 860 aa21.98■■□□□ 1.11
SMARCD1-201ENST00000381513 AOX1Q06278 1338 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 UBTFL1P0CB47 393 aaPredicted RBP21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 TXLNAP40222 546 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 LIG3P49916 1009 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 DONSONQ9NYP3 566 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 AKAP2Q9Y2D5 859 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 TULP4Q9NRJ4 1543 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 SERPINC1P01008 464 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 CFAP100Q494V2 611 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 LRRC31Q6UY01 552 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 SUGP1Q8IWZ8 645 aaKnown RBP21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 SIL1Q9H173 461 aa21.97■■□□□ 1.11
SMARCD1-201ENST00000381513 CHL1O00533 1208 aa21.96■■□□□ 1.11
SMARCD1-201ENST00000381513 PPFIA3O75145 1194 aa21.96■■□□□ 1.11
SMARCD1-201ENST00000381513 PDILTQ8N807 584 aa21.96■■□□□ 1.11
SMARCD1-201ENST00000381513 CCDC12Q8WUD4 166 aaPredicted RBP21.96■■□□□ 1.11
SMARCD1-201ENST00000381513 DHX58Q96C10 678 aa21.96■■□□□ 1.11
SMARCD1-201ENST00000381513 SOS1Q07889 1333 aaPredicted RBP21.95■■□□□ 1.11
SMARCD1-201ENST00000381513 KCNJ6P48051 423 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 BRD3Q15059 726 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 NBPF6Q5VWK0 638 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 NBPF4Q96M43 638 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 ERLIN1O75477 346 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 FAM160A1Q05DH4 1040 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 ANKRD1Q15327 319 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 ERLIN2O94905 339 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 RESTQ13127 1097 aa21.95■■□□□ 1.1
SMARCD1-201ENST00000381513 MAP3K9P80192 1104 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 DHX8Q14562 1220 aaKnown RBP21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 KARSQ15046 597 aaKnown RBP21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 TSPYL4Q9UJ04 414 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 PPP2R2CQ9Y2T4 447 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 INO80Q9ULG1 1556 aaPredicted RBP21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 FANCCQ00597 558 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 PSME1Q06323 249 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 SULT6B1Q6IMI4 303 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 RSRC2Q7L4I2 434 aaKnown RBP21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 PPP1R42Q7Z4L9 355 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 MRFAP1Q9Y605 127 aa21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 YTHDC2Q9H6S0 1430 aaKnown RBP21.94■■□□□ 1.1
SMARCD1-201ENST00000381513 A0A087WUV0 522 aaPredicted RBP21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 MAP2K7O14733 419 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 CHMP4BP1P59074 171 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 ZFYVE9O95405 1425 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 A0A1B0GVL5 298 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 VWA3AA6NCI4 1184 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 SWT1Q5T5J6 900 aaKnown RBP21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 CEP89Q96ST8 783 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 ATP1A3P13637 1013 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 UBASH3AP57075 661 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 FAM204AQ9H8W3 233 aa21.93■■□□□ 1.1
SMARCD1-201ENST00000381513 RHOXF2BP0C7M4 288 aa21.92■■□□□ 1.1
SMARCD1-201ENST00000381513 RHOXF2Q9BQY4 288 aa21.92■■□□□ 1.1
SMARCD1-201ENST00000381513 TOP1P11387 765 aaKnown RBP21.92■■□□□ 1.1
SMARCD1-201ENST00000381513 SF3A1Q15459 793 aaKnown RBP21.92■■□□□ 1.1
SMARCD1-201ENST00000381513 WDHD1O75717 1129 aaPredicted RBP21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 GUCY1B3Q02153 619 aa21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 USP28Q96RU2 1077 aa21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 ABCB6Q9NP58 842 aa21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 FLIIQ13045 1269 aa21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 NECTIN1Q15223 517 aa21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 PPFIA4O75335 1185 aa21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 GLRX3O76003 335 aaKnown RBP21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 ZRANB1Q9UGI0 708 aa21.91■■□□□ 1.1
SMARCD1-201ENST00000381513 GSCP56915 257 aaPredicted RBP21.9■■□□□ 1.1
SMARCD1-201ENST00000381513 BEND6Q5SZJ8 279 aaPredicted RBP21.9■■□□□ 1.1
SMARCD1-201ENST00000381513 ADCY9O60503 1353 aa21.9■■□□□ 1.1
SMARCD1-201ENST00000381513 SLC27A2O14975 620 aa21.89■■□□□ 1.1
SMARCD1-201ENST00000381513 RPS6KA5O75582 802 aa21.89■■□□□ 1.1
SMARCD1-201ENST00000381513 PLEKHO1Q53GL0 409 aaPredicted RBP21.89■■□□□ 1.1
SMARCD1-201ENST00000381513 FBXW10Q5XX13 1052 aa21.89■■□□□ 1.1
SMARCD1-201ENST00000381513 CDK19Q9BWU1 502 aa21.89■■□□□ 1.1
SMARCD1-201ENST00000381513 RABEP2Q9H5N1 569 aa21.89■■□□□ 1.1
SMARCD1-201ENST00000381513 CPSF1Q10570 1443 aaKnown RBP21.89■■□□□ 1.1
SMARCD1-201ENST00000381513 HSP90AA4PQ58FG1 418 aa21.89■■□□□ 1.09
SMARCD1-201ENST00000381513 USP8P40818 1118 aa21.89■■□□□ 1.09
SMARCD1-201ENST00000381513 EIF5P55010 431 aaKnown RBP21.89■■□□□ 1.09
SMARCD1-201ENST00000381513 FAM227BQ96M60 508 aa21.89■■□□□ 1.09
SMARCD1-201ENST00000381513 DESI2Q9BSY9 194 aa21.88■■□□□ 1.09
SMARCD1-201ENST00000381513 VWDEQ8N2E2 1590 aa21.88■■□□□ 1.09
SMARCD1-201ENST00000381513 GIGYF1O75420 1035 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms