RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 CCDC8Q9H0W5 538 aaPredicted RBP10.9□□□□□ -0.66
SNX1-202ENST00000380285 ZFYVE9O95405 1425 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 ALDH1L1O75891 902 aa10.9□□□□□ -0.67
SNX1-202ENST00000380285 MBIPQ9NS73 344 aa10.9□□□□□ -0.67
SNX1-202ENST00000380285 DUOX2Q9NRD8 1548 aa10.9□□□□□ -0.67
SNX1-202ENST00000380285 ATP5DP30049 168 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 STAT6P42226 847 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 MCMDC2Q4G0Z9 681 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 ANKLE2Q86XL3 938 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 ZBTB43O43298 467 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 AOPEPQ8N6M6 819 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 ZNF445P59923 1031 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 DAAM2Q86T65 1068 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 LRRC45Q96CN5 670 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 CWC25Q9NXE8 425 aaPredicted RBP10.89□□□□□ -0.67
SNX1-202ENST00000380285 BAG3O95817 575 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 CALM1P0DP23 149 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 CALM2P0DP24 149 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 CALM3P0DP25 149 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 CALML3P27482 149 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 A0A1B0GUA9 196 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 SPTLC2O15270 562 aa10.89□□□□□ -0.67
SNX1-202ENST00000380285 PRPF4BQ13523 1007 aaKnown RBP10.89□□□□□ -0.67
SNX1-202ENST00000380285 ZSCAN29Q8IWY8 852 aaPredicted RBP10.89□□□□□ -0.67
SNX1-202ENST00000380285 IQCGQ9H095 443 aaKnown RBP10.89□□□□□ -0.67
SNX1-202ENST00000380285 TNNC1P63316 161 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 FERMT2Q96AC1 680 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 IFT74Q96LB3 600 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 KAT14Q9H8E8 782 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 DISP3Q9P2K9 1392 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 ZMYM4Q5VZL5 1548 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 UGGT2Q9NYU1 1516 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 ATRIPQ8WXE1 791 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 RRAGBQ5VZM2 374 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 MYRIPQ8NFW9 859 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 SPAG5Q96R06 1193 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 THUMPD2Q9BTF0 503 aaKnown RBP10.88□□□□□ -0.67
SNX1-202ENST00000380285 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 AOX1Q06278 1338 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 WASLO00401 505 aaPredicted RBP10.88□□□□□ -0.67
SNX1-202ENST00000380285 RBM5P52756 815 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNX1-202ENST00000380285 WTAPQ15007 396 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 NUTM2AQ8IVF1 878 aaPredicted RBP10.88□□□□□ -0.67
SNX1-202ENST00000380285 NAP1L3Q99457 506 aaPredicted RBP10.88□□□□□ -0.67
SNX1-202ENST00000380285 ALG1Q9BT22 464 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 CLUL1Q15846 466 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 SLC26A6Q9BXS9 759 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 DCTPP1Q9H773 170 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 TMOD3Q9NYL9 352 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 ATP8B2P98198 1209 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 PPP1R14CQ8TAE6 165 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 SMC6Q96SB8 1091 aa10.88□□□□□ -0.67
SNX1-202ENST00000380285 MTRF1LQ9UGC7 380 aaKnown RBP10.88□□□□□ -0.67
SNX1-202ENST00000380285 DDX54Q8TDD1 881 aaKnown RBP10.87□□□□□ -0.67
SNX1-202ENST00000380285 PANK2Q9BZ23 570 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 DNAJC25Q9H1X3 360 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 TBCAO75347 108 aaKnown RBP10.87□□□□□ -0.67
SNX1-202ENST00000380285 GNAT2P19087 354 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 GBP6Q6ZN66 633 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 PIBF1Q8WXW3 757 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 TRERF1Q96PN7 1200 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 CDC5LQ99459 802 aaKnown RBP10.87□□□□□ -0.67
SNX1-202ENST00000380285 SAMD15Q9P1V8 674 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 MAP3K2Q9Y2U5 619 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 PCDHB15Q9Y5E8 787 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 RBM8AQ9Y5S9 174 aaKnown RBP10.87□□□□□ -0.67
SNX1-202ENST00000380285 F6X3S4 739 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 GSTO1P78417 241 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 ESR2Q92731 530 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
SNX1-202ENST00000380285 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.87□□□□□ -0.67
SNX1-202ENST00000380285 TCERG1LQ5VWI1 586 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 MICU3Q86XE3 530 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
SNX1-202ENST00000380285 STIM2Q9P246 746 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 CCDC42Q96M95 316 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 LLPHQ9BRT6 129 aaKnown RBP10.87□□□□□ -0.67
SNX1-202ENST00000380285 VPS18Q9P253 973 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 ELP1O95163 1332 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 RTN1Q16799 776 aa10.87□□□□□ -0.67
SNX1-202ENST00000380285 KLF18A0A0U1RQI7 1052 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 LIG1P18858 919 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 DNM1Q05193 864 aaKnown RBP10.86□□□□□ -0.67
SNX1-202ENST00000380285 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
SNX1-202ENST00000380285 TTF2Q9UNY4 1162 aaKnown RBP10.86□□□□□ -0.67
SNX1-202ENST00000380285 UHRF1BP1Q6BDS2 1440 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 LACTBP83111 547 aaPredicted RBP10.86□□□□□ -0.67
SNX1-202ENST00000380285 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 ZGPATQ8N5A5 531 aaKnown RBP10.86□□□□□ -0.67
SNX1-202ENST00000380285 ADGRL1O94910 1474 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 ARHGAP25P42331 645 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
SNX1-202ENST00000380285 SETDB1Q15047 1291 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 MIS18AQ9NYP9 233 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 MACROD2A1Z1Q3 448 aa10.86□□□□□ -0.67
SNX1-202ENST00000380285 IDEP14735 1019 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms