RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GPHNQ9NQX3 736 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-202ENST00000380281 TULP2O00295 520 aa14.63□□□□□ -0.07
PRPF40B-202ENST00000380281 RPS6KB1P23443 525 aa14.63□□□□□ -0.07
PRPF40B-202ENST00000380281 NEK1Q96PY6 1258 aa14.63□□□□□ -0.07
PRPF40B-202ENST00000380281 GJB4Q9NTQ9 266 aa14.63□□□□□ -0.07
PRPF40B-202ENST00000380281 FAM200AQ8TCP9 573 aa14.63□□□□□ -0.07
PRPF40B-202ENST00000380281 PGBD1Q96JS3 809 aa14.63□□□□□ -0.07
PRPF40B-202ENST00000380281 SMTNL1A8MU46 457 aa14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 BIN1O00499 593 aa14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 HNRNPH2P55795 449 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 SLC20A2Q08357 652 aa14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 TMX1Q9H3N1 280 aa14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 SETD1AO15047 1707 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 FKBP4Q02790 459 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 PTPN21Q16825 1174 aa14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 TTLL5Q6EMB2 1281 aa14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 LMBR1LQ6UX01 489 aa14.62□□□□□ -0.07
PRPF40B-202ENST00000380281 POLR3DP05423 398 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 ANKRD13DQ6ZTN6 518 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 TTC5Q8N0Z6 440 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 TMEM87AQ8NBN3 555 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 BECN2A8MW95 431 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 GOLGA6L6A8MZA4 724 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 GOLGA6L19H0YKK7 550 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 TAF5LO75529 589 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 CYP21A2P08686 494 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 ME1P48163 572 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 FUCA2Q9BTY2 467 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 ZBTB3Q9H5J0 574 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 A0A0G2JS52 829 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 ALDH1L1O75891 902 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 TPD52L1Q16890 204 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 CLIP2Q9UDT6 1046 aa14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 FEZ2Q9UHY8 353 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-202ENST00000380281 NEURL1BA8MQ27 555 aa14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 PDCP20941 246 aa14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 GCKRQ14397 625 aa14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 DDX21Q9NR30 783 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 TNNT3P45378 269 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 RBM6P78332 1123 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 RGS22Q8NE09 1264 aa14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 SECISBP2LQ93073 1101 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 GTF3C6Q969F1 213 aa14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 ZNF215Q9UL58 517 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-202ENST00000380281 FBXO38Q6PIJ6 1188 aa14.59□□□□□ -0.07
PRPF40B-202ENST00000380281 AKAP12Q02952 1782 aa14.59□□□□□ -0.07
PRPF40B-202ENST00000380281 ELF2Q15723 593 aa14.59□□□□□ -0.07
PRPF40B-202ENST00000380281 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
PRPF40B-202ENST00000380281 CCDC144BQ3MJ40 725 aa14.59□□□□□ -0.07
PRPF40B-202ENST00000380281 CCDC144CPQ8IYA2 1237 aa14.59□□□□□ -0.07
PRPF40B-202ENST00000380281 SCAND2PQ9GZW5 306 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-202ENST00000380281 KAT6BQ8WYB5 2073 aa14.58□□□□□ -0.07
PRPF40B-202ENST00000380281 RAD51AP2Q09MP3 1159 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 SCRN1Q12765 414 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 TNNI3KQ59H18 835 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 GORABQ5T7V8 394 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 C11orf57Q6ZUT1 292 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 CCAR1Q8IX12 1150 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 FPGT-TNNI3KV9GXZ4 949 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 RXRAP19793 462 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 HSP90AA4PQ58FG1 418 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 ZNF397Q8NF99 534 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 SDF4Q9BRK5 362 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 PXDNQ92626 1479 aa14.58□□□□□ -0.08
PRPF40B-202ENST00000380281 CEMIPQ8WUJ3 1361 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 PDIA6Q15084 440 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 STOX1Q6ZVD7 989 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 CACTINQ8WUQ7 758 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 NOL10Q9BSC4 688 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 TM6SF1Q9BZW5 370 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 A0A1B0GVL5 298 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 SF3A1Q15459 793 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 AMOTQ4VCS5 1084 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 SYCP1Q15431 976 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 USP28Q96RU2 1077 aa14.57□□□□□ -0.08
PRPF40B-202ENST00000380281 USP27XA6NNY8 438 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 HIP1O00291 1037 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 TPM3P06753 285 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 PTPN12Q05209 780 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 DIP2BQ9P265 1576 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 MTX1Q13505 466 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 ANKRD1Q15327 319 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 NEK11Q8NG66 645 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 COL15A1P39059 1388 aa14.56□□□□□ -0.08
PRPF40B-202ENST00000380281 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 LRRC24Q50LG9 513 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 CEP135Q66GS9 1140 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 PI16Q6UXB8 463 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 RSPH14Q9UHP6 348 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 NPHP3Q7Z494 1330 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 ARHGEF25Q86VW2 580 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 PUS3Q9BZE2 481 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 DIP2AQ14689 1571 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 A1BGP04217 495 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 ZNF75DP51815 510 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms