RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
PRPF18-202ENST00000378572 WDR63Q8IWG1 891 aa17.58■□□□□ 0.4
PRPF18-202ENST00000378572 C8orf58Q8NAV2 365 aa17.58■□□□□ 0.4
PRPF18-202ENST00000378572 JARID2Q92833 1246 aaPredicted RBP17.58■□□□□ 0.4
PRPF18-202ENST00000378572 CHMP4AQ9BY43 222 aa17.58■□□□□ 0.4
PRPF18-202ENST00000378572 CWC25Q9NXE8 425 aaPredicted RBP17.58■□□□□ 0.4
PRPF18-202ENST00000378572 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
PRPF18-202ENST00000378572 COL4A1P02462 1669 aa17.57■□□□□ 0.4
PRPF18-202ENST00000378572 SHTN1A0MZ66 631 aa17.57■□□□□ 0.4
PRPF18-202ENST00000378572 PSMD14O00487 310 aa17.57■□□□□ 0.4
PRPF18-202ENST00000378572 RPS8P62241 208 aaKnown RBP17.57■□□□□ 0.4
PRPF18-202ENST00000378572 CCDC152Q4G0S7 254 aa17.57■□□□□ 0.4
PRPF18-202ENST00000378572 CST9Q5W186 159 aa17.57■□□□□ 0.4
PRPF18-202ENST00000378572 POLLQ9UGP5 575 aa17.57■□□□□ 0.4
PRPF18-202ENST00000378572 TLL2Q9Y6L7 1015 aa17.57■□□□□ 0.4
PRPF18-202ENST00000378572 UFL1O94874 794 aa17.56■□□□□ 0.4
PRPF18-202ENST00000378572 SEC31BQ9NQW1 1179 aa17.56■□□□□ 0.4
PRPF18-202ENST00000378572 TBC1D10BQ4KMP7 808 aaPredicted RBP17.55■□□□□ 0.4
PRPF18-202ENST00000378572 RBM26Q5T8P6 1007 aaKnown RBP17.55■□□□□ 0.4
PRPF18-202ENST00000378572 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
PRPF18-202ENST00000378572 TBC1D16Q8TBP0 767 aa17.55■□□□□ 0.4
PRPF18-202ENST00000378572 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
PRPF18-202ENST00000378572 STK31Q9BXU1 1019 aa17.55■□□□□ 0.4
PRPF18-202ENST00000378572 ZC3H12CQ9C0D7 883 aaKnown RBP17.55■□□□□ 0.4
PRPF18-202ENST00000378572 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
PRPF18-202ENST00000378572 CDC37L1Q7L3B6 337 aa17.55■□□□□ 0.4
PRPF18-202ENST00000378572 SAMD7Q7Z3H4 446 aa17.55■□□□□ 0.4
PRPF18-202ENST00000378572 ZC3H15Q8WU90 426 aaKnown RBP17.55■□□□□ 0.4
PRPF18-202ENST00000378572 GGA1Q9UJY5 639 aa17.55■□□□□ 0.4
PRPF18-202ENST00000378572 MAP3K2Q9Y2U5 619 aa17.55■□□□□ 0.4
PRPF18-202ENST00000378572 PDE8AO60658 829 aa17.54■□□□□ 0.4
PRPF18-202ENST00000378572 PCCAP05165 728 aaPredicted RBP17.54■□□□□ 0.4
PRPF18-202ENST00000378572 HIRAP54198 1017 aaPredicted RBP17.54■□□□□ 0.4
PRPF18-202ENST00000378572 IL16Q14005 1332 aa17.54■□□□□ 0.4
PRPF18-202ENST00000378572 THSD7BQ9C0I4 1608 aa17.54■□□□□ 0.4
PRPF18-202ENST00000378572 E9PSI1 815 aa17.53■□□□□ 0.4
PRPF18-202ENST00000378572 AOC2O75106 756 aa17.53■□□□□ 0.4
PRPF18-202ENST00000378572 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
PRPF18-202ENST00000378572 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
PRPF18-202ENST00000378572 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
PRPF18-202ENST00000378572 TRMT2AQ8IZ69 625 aaKnown RBP17.53■□□□□ 0.4
PRPF18-202ENST00000378572 METTL22Q9BUU2 404 aaPredicted RBP17.53■□□□□ 0.4
PRPF18-202ENST00000378572 ANKRD18AQ8IVF6 992 aa17.52■□□□□ 0.4
PRPF18-202ENST00000378572 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
PRPF18-202ENST00000378572 DPF2Q92785 391 aa17.52■□□□□ 0.4
PRPF18-202ENST00000378572 RPS12P25398 132 aaKnown RBP17.52■□□□□ 0.39
PRPF18-202ENST00000378572 SAPCD2Q86UD0 394 aa17.52■□□□□ 0.39
PRPF18-202ENST00000378572 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.39
PRPF18-202ENST00000378572 KCNQ5Q9NR82 932 aa17.52■□□□□ 0.39
PRPF18-202ENST00000378572 RTL9Q8NET4 1388 aa17.51■□□□□ 0.39
PRPF18-202ENST00000378572 KRT26Q7Z3Y9 468 aa17.51■□□□□ 0.39
PRPF18-202ENST00000378572 DCPSQ96C86 337 aaKnown RBP17.51■□□□□ 0.39
PRPF18-202ENST00000378572 PGAP2Q9UHJ9 254 aa17.51■□□□□ 0.39
PRPF18-202ENST00000378572 TSKSQ9UJT2 592 aa17.51■□□□□ 0.39
PRPF18-202ENST00000378572 PI4KAP2A4QPH2 592 aa17.5■□□□□ 0.39
PRPF18-202ENST00000378572 PI4KAP1Q8N8J0 262 aa17.5■□□□□ 0.39
PRPF18-202ENST00000378572 CDC5LQ99459 802 aaKnown RBP17.5■□□□□ 0.39
PRPF18-202ENST00000378572 CTSWP56202 376 aa17.5■□□□□ 0.39
PRPF18-202ENST00000378572 KIF4BQ2VIQ3 1234 aa17.5■□□□□ 0.39
PRPF18-202ENST00000378572 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
PRPF18-202ENST00000378572 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
PRPF18-202ENST00000378572 PODXL2Q9NZ53 605 aa17.5■□□□□ 0.39
PRPF18-202ENST00000378572 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
PRPF18-202ENST00000378572 XDHP47989 1333 aa17.49■□□□□ 0.39
PRPF18-202ENST00000378572 ADM5C9JUS6 153 aa17.49■□□□□ 0.39
PRPF18-202ENST00000378572 EGFRP00533 1210 aa17.49■□□□□ 0.39
PRPF18-202ENST00000378572 HUNKP57058 714 aa17.49■□□□□ 0.39
PRPF18-202ENST00000378572 MAP2K2P36507 400 aa17.48■□□□□ 0.39
PRPF18-202ENST00000378572 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
PRPF18-202ENST00000378572 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
PRPF18-202ENST00000378572 CWF19L2Q2TBE0 894 aaKnown RBP17.47■□□□□ 0.39
PRPF18-202ENST00000378572 SULF1Q8IWU6 871 aa17.47■□□□□ 0.39
PRPF18-202ENST00000378572 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
PRPF18-202ENST00000378572 GGA3Q9NZ52 723 aa17.47■□□□□ 0.39
PRPF18-202ENST00000378572 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
PRPF18-202ENST00000378572 MYH16Q9H6N6 1097 aa17.47■□□□□ 0.39
PRPF18-202ENST00000378572 SCN9AQ15858 1988 aa17.46■□□□□ 0.39
PRPF18-202ENST00000378572 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
PRPF18-202ENST00000378572 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
PRPF18-202ENST00000378572 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
PRPF18-202ENST00000378572 C2orf69Q8N8R5 385 aa17.46■□□□□ 0.39
PRPF18-202ENST00000378572 HHIPL1Q96JK4 782 aa17.46■□□□□ 0.39
PRPF18-202ENST00000378572 GREM2Q9H772 168 aa17.46■□□□□ 0.39
PRPF18-202ENST00000378572 GBA2Q9HCG7 927 aaPredicted RBP17.46■□□□□ 0.39
PRPF18-202ENST00000378572 MYH3P11055 1940 aa17.45■□□□□ 0.38
PRPF18-202ENST00000378572 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
PRPF18-202ENST00000378572 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
PRPF18-202ENST00000378572 NEURL1BA8MQ27 555 aa17.44■□□□□ 0.38
PRPF18-202ENST00000378572 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
PRPF18-202ENST00000378572 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
PRPF18-202ENST00000378572 G2E3Q7L622 706 aa17.44■□□□□ 0.38
PRPF18-202ENST00000378572 ABHD8Q96I13 439 aa17.44■□□□□ 0.38
PRPF18-202ENST00000378572 CA12O43570 354 aa17.44■□□□□ 0.38
PRPF18-202ENST00000378572 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
PRPF18-202ENST00000378572 NOGQ13253 232 aa17.44■□□□□ 0.38
PRPF18-202ENST00000378572 ASTN2O75129 1339 aaPredicted RBP17.43■□□□□ 0.38
PRPF18-202ENST00000378572 AGBL3Q8NEM8 1001 aa17.43■□□□□ 0.38
PRPF18-202ENST00000378572 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
PRPF18-202ENST00000378572 FANCIQ9NVI1 1328 aa17.43■□□□□ 0.38
PRPF18-202ENST00000378572 USP17L3A6NCW0 530 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms