RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 CHGBP05060 677 aa16.32■□□□□ 0.2
SF1-205ENST00000377394 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
SF1-205ENST00000377394 STK3Q13188 491 aa16.32■□□□□ 0.2
SF1-205ENST00000377394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.21e-10■■■□□ 15.6
SF1-205ENST00000377394 NDUFB9Q9Y6M9 179 aa16.32■□□□□ 0.2
SF1-205ENST00000377394 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
SF1-205ENST00000377394 KRT32Q14532 448 aa16.31■□□□□ 0.2
SF1-205ENST00000377394 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
SF1-205ENST00000377394 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
SF1-205ENST00000377394 RFX7Q2KHR2 1363 aa16.31■□□□□ 0.2
SF1-205ENST00000377394 ZNF609O15014 1411 aa16.31■□□□□ 0.2
SF1-205ENST00000377394 UBE3BQ7Z3V4 1068 aa16.31■□□□□ 0.2
SF1-205ENST00000377394 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
SF1-205ENST00000377394 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
SF1-205ENST00000377394 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 SCAND2PQ9GZW5 306 aaPredicted RBP16.3■□□□□ 0.2
SF1-205ENST00000377394 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 CHMP3Q9Y3E7 222 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 CASP7P55210 303 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
SF1-205ENST00000377394 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.3■□□□□ 0.2
SF1-205ENST00000377394 NRBP1Q9UHY1 535 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
SF1-205ENST00000377394 V9GYY5 206 aaPredicted RBP16.3■□□□□ 0.2
SF1-205ENST00000377394 JAK2O60674 1132 aa16.29■□□□□ 0.2
SF1-205ENST00000377394 CCDC129Q6ZRS4 1044 aa16.29■□□□□ 0.2
SF1-205ENST00000377394 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
SF1-205ENST00000377394 SEC62Q99442 399 aaKnown RBP16.29■□□□□ 0.2
SF1-205ENST00000377394 HAUS7Q99871 368 aa16.29■□□□□ 0.2
SF1-205ENST00000377394 CAMK4Q16566 473 aa16.29■□□□□ 0.2
SF1-205ENST00000377394 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
SF1-205ENST00000377394 SPATA32Q96LK8 384 aa16.29■□□□□ 0.2
SF1-205ENST00000377394 CYP27B1O15528 508 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 CYP21A2P08686 494 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 TNNT1P13805 278 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 CAPN2P17655 700 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 TYRO3Q06418 890 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 CCDC186Q7Z3E2 898 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 DACT1Q9NYF0 836 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
SF1-205ENST00000377394 SMTNL1A8MU46 457 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
SF1-205ENST00000377394 DCAF5Q96JK2 942 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 DNAJC2Q99543 621 aaKnown RBP16.28■□□□□ 0.2
SF1-205ENST00000377394 A0A087WZG4 1122 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 MCMDC2Q4G0Z9 681 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 RBM43Q6ZSC3 357 aaKnown RBP16.28■□□□□ 0.2
SF1-205ENST00000377394 Q6ZUG5 572 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
SF1-205ENST00000377394 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 TIGD1Q96MW7 591 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
SF1-205ENST00000377394 ABCC6O95255 1503 aa16.27■□□□□ 0.2
SF1-205ENST00000377394 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
SF1-205ENST00000377394 AFDNP55196 1824 aaKnown RBP16.27■□□□□ 0.19
SF1-205ENST00000377394 RESTQ13127 1097 aa16.27■□□□□ 0.19
SF1-205ENST00000377394 PGBD1Q96JS3 809 aa16.27■□□□□ 0.19
SF1-205ENST00000377394 COL18A1P39060 1754 aa16.27■□□□□ 0.19
SF1-205ENST00000377394 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.19
SF1-205ENST00000377394 KMT5BQ4FZB7 885 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
SF1-205ENST00000377394 BRF1Q92994 677 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 TNMDQ9H2S6 317 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 CCDC66A2RUB6 948 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 GOLGA6L6A8MZA4 724 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 CKAP2LQ8IYA6 745 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 CCDC112Q8NEF3 446 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 C19orf44Q9H6X5 657 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
SF1-205ENST00000377394 GLI3P10071 1580 aa16.26■□□□□ 0.19
SF1-205ENST00000377394 TPM3P06753 285 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 STOX1Q6ZVD7 989 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 LUZP1Q86V48 1076 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 KRT222Q8N1A0 295 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 FOXO4P98177 505 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 SYCP1Q15431 976 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
SF1-205ENST00000377394 SCRN1Q12765 414 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 SMARCC2Q8TAQ2 1214 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 NR1I2O75469 434 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 DRC7Q8IY82 874 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
SF1-205ENST00000377394 CBX8Q9HC52 389 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 ATG9AQ7Z3C6 839 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
SF1-205ENST00000377394 LRRC2Q9BYS8 371 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms