RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 KRT32Q14532 448 aa19.22■□□□□ 0.67
TRIM27-202ENST00000377199 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
TRIM27-202ENST00000377199 LEO1Q8WVC0 666 aaPredicted RBP19.22■□□□□ 0.67
TRIM27-202ENST00000377199 TSC1Q92574 1164 aa19.22■□□□□ 0.67
TRIM27-202ENST00000377199 CWC25Q9NXE8 425 aaPredicted RBP19.22■□□□□ 0.67
TRIM27-202ENST00000377199 NR1I2O75469 434 aa19.21■□□□□ 0.67
TRIM27-202ENST00000377199 FOXO4P98177 505 aa19.21■□□□□ 0.67
TRIM27-202ENST00000377199 RAB11FIP4Q86YS3 637 aa19.21■□□□□ 0.67
TRIM27-202ENST00000377199 KBTBD3Q8NAB2 608 aa19.21■□□□□ 0.67
TRIM27-202ENST00000377199 FBXW7Q969H0 707 aa19.21■□□□□ 0.67
TRIM27-202ENST00000377199 U3KPZ7 1027 aaPredicted RBP19.21■□□□□ 0.67
TRIM27-202ENST00000377199 HAND2P61296 217 aa19.21■□□□□ 0.67
TRIM27-202ENST00000377199 TTLL5Q6EMB2 1281 aa19.21■□□□□ 0.67
TRIM27-202ENST00000377199 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 HSPA2P54652 639 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 TYRO3Q06418 890 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 GORABQ5T7V8 394 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 IFIT1P09914 478 aaKnown RBP19.2■□□□□ 0.66
TRIM27-202ENST00000377199 ANO6Q4KMQ2 910 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 ATG9AQ7Z3C6 839 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 CASP7P55210 303 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 DRC7Q8IY82 874 aa19.2■□□□□ 0.66
TRIM27-202ENST00000377199 SCAND2PQ9GZW5 306 aaPredicted RBP19.2■□□□□ 0.66
TRIM27-202ENST00000377199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.2■□□□□ 0.661e-7■□□□□ 10.2
TRIM27-202ENST00000377199 A0A087WWV3 80 aa19.19■□□□□ 0.66
TRIM27-202ENST00000377199 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
TRIM27-202ENST00000377199 SIPA1L3O60292 1781 aaPredicted RBP19.19■□□□□ 0.66
TRIM27-202ENST00000377199 A0A1B0GUL7 405 aa19.19■□□□□ 0.66
TRIM27-202ENST00000377199 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
TRIM27-202ENST00000377199 TRPM3Q9HCF6 1732 aaPredicted RBP19.18■□□□□ 0.66
TRIM27-202ENST00000377199 WASHC4Q2M389 1173 aa19.18■□□□□ 0.66
TRIM27-202ENST00000377199 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
TRIM27-202ENST00000377199 PGBD1Q96JS3 809 aa19.18■□□□□ 0.66
TRIM27-202ENST00000377199 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
TRIM27-202ENST00000377199 GPHNQ9NQX3 736 aaPredicted RBP19.18■□□□□ 0.66
TRIM27-202ENST00000377199 ERCC4Q92889 916 aaPredicted RBP19.17■□□□□ 0.66
TRIM27-202ENST00000377199 FAM89AQ96GI7 184 aa19.17■□□□□ 0.66
TRIM27-202ENST00000377199 DNAJC25Q9H1X3 360 aa19.17■□□□□ 0.66
TRIM27-202ENST00000377199 H7C1W4 665 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 MST1RQ04912 1400 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 PI16Q6UXB8 463 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 FAM200AQ8TCP9 573 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 UBE2Q2Q8WVN8 375 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 PTPDC1A2A3K4 754 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 HSPD1P10809 573 aaKnown RBP19.16■□□□□ 0.66
TRIM27-202ENST00000377199 ADORA1P30542 326 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 TSGA10IPQ3SY00 556 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 SASS6Q6UVJ0 657 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 PIBF1Q8WXW3 757 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 PYCARDQ9ULZ3 195 aa19.16■□□□□ 0.66
TRIM27-202ENST00000377199 DHX32Q7L7V1 743 aaKnown RBP19.15■□□□□ 0.66
TRIM27-202ENST00000377199 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
TRIM27-202ENST00000377199 SCN11AQ9UI33 1791 aa19.15■□□□□ 0.66
TRIM27-202ENST00000377199 CBX8Q9HC52 389 aa19.15■□□□□ 0.66
TRIM27-202ENST00000377199 AFDNP55196 1824 aaKnown RBP19.14■□□□□ 0.66
TRIM27-202ENST00000377199 E7EWF7 191 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 M0R2C6 588 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 EYA2O00167 538 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 PTGS1P23219 599 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 RESTQ13127 1097 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 CCDC57Q2TAC2 916 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 OTUD7BQ6GQQ9 843 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 CADPS2Q86UW7 1296 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 TRIM5Q9C035 493 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 MAST3O60307 1309 aa19.14■□□□□ 0.66
TRIM27-202ENST00000377199 IL15P40933 162 aaPredicted RBP19.14■□□□□ 0.65
TRIM27-202ENST00000377199 CEP126Q9P2H0 1117 aa19.14■□□□□ 0.65
TRIM27-202ENST00000377199 ZNF142P52746 1687 aaPredicted RBP19.14■□□□□ 0.65
TRIM27-202ENST00000377199 GPTP24298 496 aa19.14■□□□□ 0.65
TRIM27-202ENST00000377199 BCL11BQ9C0K0 894 aaPredicted RBP19.14■□□□□ 0.65
TRIM27-202ENST00000377199 KCNF1Q9H3M0 494 aa19.14■□□□□ 0.65
TRIM27-202ENST00000377199 ELP1O95163 1332 aa19.14■□□□□ 0.65
TRIM27-202ENST00000377199 NSUN7Q8NE18 718 aaKnown RBP19.13■□□□□ 0.65
TRIM27-202ENST00000377199 A0A0G2JS52 829 aa19.13■□□□□ 0.65
TRIM27-202ENST00000377199 TTC39AQ5SRH9 613 aa19.13■□□□□ 0.65
TRIM27-202ENST00000377199 NRBP1Q9UHY1 535 aa19.13■□□□□ 0.65
TRIM27-202ENST00000377199 SPATA31A3Q5VYP0 1347 aa19.13■□□□□ 0.65
TRIM27-202ENST00000377199 JCADQ9P266 1359 aa19.12■□□□□ 0.65
TRIM27-202ENST00000377199 CTDNEP1O95476 244 aa19.12■□□□□ 0.65
TRIM27-202ENST00000377199 OSBP2Q969R2 916 aa19.12■□□□□ 0.65
TRIM27-202ENST00000377199 EVA1CP58658 441 aa19.12■□□□□ 0.65
TRIM27-202ENST00000377199 CAMTA1Q9Y6Y1 1673 aa19.12■□□□□ 0.65
TRIM27-202ENST00000377199 TNS3Q68CZ2 1445 aa19.12■□□□□ 0.65
TRIM27-202ENST00000377199 PCDH11XQ9BZA7 1347 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 PCDH11YQ9BZA8 1340 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 ZNF165P49910 485 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 SCARF1Q14162 830 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 GLIPR1L2Q4G1C9 344 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 ALDH8A1Q9H2A2 487 aaPredicted RBP19.11■□□□□ 0.65
TRIM27-202ENST00000377199 DDX19AQ9NUU7 478 aaKnown RBP19.11■□□□□ 0.65
TRIM27-202ENST00000377199 SH3TC1Q8TE82 1336 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 RNF113AO15541 343 aaKnown RBP19.11■□□□□ 0.65
TRIM27-202ENST00000377199 LRMPQ12912 555 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 CLSTN2Q9H4D0 955 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 ME1P48163 572 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 ZMYM1Q5SVZ6 1142 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 USP28Q96RU2 1077 aa19.11■□□□□ 0.65
TRIM27-202ENST00000377199 GJB4Q9NTQ9 266 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms