RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TRPM4Q8TD43 1214 aa26.98■■□□□ 1.91
VSX1-201ENST00000376707 ZC3H15Q8WU90 426 aaKnown RBP26.98■■□□□ 1.91
VSX1-201ENST00000376707 SALL2Q9Y467 1007 aaPredicted RBP26.98■■□□□ 1.91
VSX1-201ENST00000376707 G3V3G9 751 aa26.97■■□□□ 1.91
VSX1-201ENST00000376707 DCAF8Q5TAQ9 597 aa26.97■■□□□ 1.91
VSX1-201ENST00000376707 G2E3Q7L622 706 aa26.97■■□□□ 1.91
VSX1-201ENST00000376707 ANKRD18AQ8IVF6 992 aa26.97■■□□□ 1.91
VSX1-201ENST00000376707 DPF2Q92785 391 aa26.97■■□□□ 1.91
VSX1-201ENST00000376707 PGAP2Q9UHJ9 254 aa26.97■■□□□ 1.91
VSX1-201ENST00000376707 GGA1Q9UJY5 639 aa26.97■■□□□ 1.91
VSX1-201ENST00000376707 WDR33Q9C0J8 1336 aaKnown RBP26.96■■□□□ 1.91
VSX1-201ENST00000376707 FANCIQ9NVI1 1328 aa26.96■■□□□ 1.91
VSX1-201ENST00000376707 SHTN1A0MZ66 631 aa26.96■■□□□ 1.91
VSX1-201ENST00000376707 FOXN1O15353 648 aa26.96■■□□□ 1.91
VSX1-201ENST00000376707 HIRAP54198 1017 aaPredicted RBP26.96■■□□□ 1.91
VSX1-201ENST00000376707 CTSWP56202 376 aa26.96■■□□□ 1.91
VSX1-201ENST00000376707 CWF19L2Q2TBE0 894 aaKnown RBP26.96■■□□□ 1.91
VSX1-201ENST00000376707 CST9Q5W186 159 aa26.96■■□□□ 1.91
VSX1-201ENST00000376707 PAXIP1Q6ZW49 1069 aaPredicted RBP26.96■■□□□ 1.91
VSX1-201ENST00000376707 GLIS2Q9BZE0 524 aaPredicted RBP26.96■■□□□ 1.91
VSX1-201ENST00000376707 CDC5LQ99459 802 aaKnown RBP26.95■■□□□ 1.9
VSX1-201ENST00000376707 NEURL1BA8MQ27 555 aa26.94■■□□□ 1.9
VSX1-201ENST00000376707 RPS12P25398 132 aaKnown RBP26.94■■□□□ 1.9
VSX1-201ENST00000376707 WDR63Q8IWG1 891 aa26.94■■□□□ 1.9
VSX1-201ENST00000376707 KCNQ5Q9NR82 932 aa26.94■■□□□ 1.9
VSX1-201ENST00000376707 CELF2O95319 508 aaKnown RBP26.93■■□□□ 1.9
VSX1-201ENST00000376707 FLIIQ13045 1269 aa26.93■■□□□ 1.9
VSX1-201ENST00000376707 WBP1LQ9NX94 342 aa26.93■■□□□ 1.9
VSX1-201ENST00000376707 RTL9Q8NET4 1388 aa26.93■■□□□ 1.9
VSX1-201ENST00000376707 XDHP47989 1333 aa26.92■■□□□ 1.9
VSX1-201ENST00000376707 ECE1P42892 770 aa26.92■■□□□ 1.9
VSX1-201ENST00000376707 CTCFP49711 727 aaPredicted RBP26.92■■□□□ 1.9
VSX1-201ENST00000376707 CDC37L1Q7L3B6 337 aa26.92■■□□□ 1.9
VSX1-201ENST00000376707 SAMD7Q7Z3H4 446 aa26.92■■□□□ 1.9
VSX1-201ENST00000376707 TTLL11Q8NHH1 800 aa26.92■■□□□ 1.9
VSX1-201ENST00000376707 CAPNS2Q96L46 248 aa26.92■■□□□ 1.9
VSX1-201ENST00000376707 TLL2Q9Y6L7 1015 aa26.92■■□□□ 1.9
VSX1-201ENST00000376707 MAP2K1Q02750 393 aaPredicted RBP26.91■■□□□ 1.9
VSX1-201ENST00000376707 GRM1Q13255 1194 aa26.91■■□□□ 1.9
VSX1-201ENST00000376707 FKBP5Q13451 457 aaPredicted RBP26.91■■□□□ 1.9
VSX1-201ENST00000376707 TBC1D10BQ4KMP7 808 aaPredicted RBP26.91■■□□□ 1.9
VSX1-201ENST00000376707 UBE3BQ7Z3V4 1068 aa26.91■■□□□ 1.9
VSX1-201ENST00000376707 CYP4F22Q6NT55 531 aa26.9■■□□□ 1.9
VSX1-201ENST00000376707 GREM2Q9H772 168 aa26.9■■□□□ 1.9
VSX1-201ENST00000376707 ZNF408Q9H9D4 720 aa26.9■■□□□ 1.9
VSX1-201ENST00000376707 H7C1W4 665 aa26.89■■□□□ 1.9
VSX1-201ENST00000376707 CAPN15O75808 1086 aa26.89■■□□□ 1.9
VSX1-201ENST00000376707 ATP2B4P23634 1241 aa26.89■■□□□ 1.9
VSX1-201ENST00000376707 TRPM7Q96QT4 1865 aa26.89■■□□□ 1.89
VSX1-201ENST00000376707 VAMP4O75379 141 aa26.88■■□□□ 1.89
VSX1-201ENST00000376707 VIL1P09327 827 aaKnown RBP26.88■■□□□ 1.89
VSX1-201ENST00000376707 EXOSC9Q06265 439 aaKnown RBP26.88■■□□□ 1.89
VSX1-201ENST00000376707 RBM26Q5T8P6 1007 aaKnown RBP26.88■■□□□ 1.89
VSX1-201ENST00000376707 DNAAF4Q8WXU2 420 aa26.88■■□□□ 1.89
VSX1-201ENST00000376707 MYH16Q9H6N6 1097 aa26.88■■□□□ 1.89
VSX1-201ENST00000376707 PRDM10Q9NQV6 1147 aa26.88■■□□□ 1.89
VSX1-201ENST00000376707 GCKRQ14397 625 aa26.87■■□□□ 1.89
VSX1-201ENST00000376707 SAPCD2Q86UD0 394 aa26.87■■□□□ 1.89
VSX1-201ENST00000376707 USP48Q86UV5 1035 aa26.87■■□□□ 1.89
VSX1-201ENST00000376707 BSDC1Q9NW68 430 aaPredicted RBP26.87■■□□□ 1.89
VSX1-201ENST00000376707 EGFRP00533 1210 aa26.86■■□□□ 1.89
VSX1-201ENST00000376707 FAM9BQ8IZU0 186 aa26.86■■□□□ 1.89
VSX1-201ENST00000376707 LINS1Q8NG48 757 aa26.85■■□□□ 1.89
VSX1-201ENST00000376707 MINPP1Q9UNW1 487 aa26.85■■□□□ 1.89
VSX1-201ENST00000376707 KIF4BQ2VIQ3 1234 aa26.84■■□□□ 1.89
VSX1-201ENST00000376707 KRT26Q7Z3Y9 468 aa26.84■■□□□ 1.89
VSX1-201ENST00000376707 DCPSQ96C86 337 aaKnown RBP26.84■■□□□ 1.89
VSX1-201ENST00000376707 IGHMBP2P38935 993 aaKnown RBP26.83■■□□□ 1.89
VSX1-201ENST00000376707 LBX1P52954 281 aa26.83■■□□□ 1.89
VSX1-201ENST00000376707 RSBN1LQ6PCB5 846 aaPredicted RBP26.83■■□□□ 1.89
VSX1-201ENST00000376707 BEGAINQ9BUH8 593 aa26.83■■□□□ 1.89
VSX1-201ENST00000376707 PLA2G12BQ9BX93 195 aa26.83■■□□□ 1.89
VSX1-201ENST00000376707 PODNQ7Z5L7 613 aa26.82■■□□□ 1.88
VSX1-201ENST00000376707 AGBL3Q8NEM8 1001 aa26.82■■□□□ 1.88
VSX1-201ENST00000376707 HHIPL1Q96JK4 782 aa26.82■■□□□ 1.88
VSX1-201ENST00000376707 SCN9AQ15858 1988 aa26.81■■□□□ 1.88
VSX1-201ENST00000376707 THSD7BQ9C0I4 1608 aa26.81■■□□□ 1.88
VSX1-201ENST00000376707 ITGA6P23229 1130 aa26.81■■□□□ 1.88
VSX1-201ENST00000376707 CCT4P50991 539 aaKnown RBP26.81■■□□□ 1.88
VSX1-201ENST00000376707 SPINK5Q9NQ38 1064 aaPredicted RBP26.81■■□□□ 1.88
VSX1-201ENST00000376707 MED23Q9ULK4 1368 aa26.81■■□□□ 1.88
VSX1-201ENST00000376707 MYH3P11055 1940 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 USP17L3A6NCW0 530 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 USP17L4A6NCW7 530 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 WTIPA6NIX2 430 aaPredicted RBP26.8■■□□□ 1.88
VSX1-201ENST00000376707 HSPA8P11142 646 aaKnown RBP26.8■■□□□ 1.88
VSX1-201ENST00000376707 MAP2K2P36507 400 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 CASP7P55210 303 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 FAM161AQ3B820 660 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 DLK2Q6UY11 383 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 USP17L1Q7RTZ2 530 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 ZNF609O15014 1411 aa26.8■■□□□ 1.88
VSX1-201ENST00000376707 ADM5C9JUS6 153 aa26.79■■□□□ 1.88
VSX1-201ENST00000376707 AOC2O75106 756 aa26.79■■□□□ 1.88
VSX1-201ENST00000376707 MPHOSPH8Q99549 860 aa26.79■■□□□ 1.88
VSX1-201ENST00000376707 GGA3Q9NZ52 723 aa26.79■■□□□ 1.88
VSX1-201ENST00000376707 CSF1RP07333 972 aa26.78■■□□□ 1.88
VSX1-201ENST00000376707 ZNF280AP59817 542 aaPredicted RBP26.78■■□□□ 1.88
VSX1-201ENST00000376707 SULF1Q8IWU6 871 aa26.78■■□□□ 1.88
VSX1-201ENST00000376707 LEMD3Q9Y2U8 911 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms