RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
TNFRSF1B-201ENST00000376259 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
TNFRSF1B-201ENST00000376259 GCKRQ14397 625 aa16.8■□□□□ 0.28
TNFRSF1B-201ENST00000376259 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CCDC69A6NI79 296 aa16.8■□□□□ 0.28
TNFRSF1B-201ENST00000376259 KLHL10Q6JEL2 608 aa16.8■□□□□ 0.28
TNFRSF1B-201ENST00000376259 POLA2Q14181 598 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 SPECC1Q5M775 1068 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 METTL24Q5JXM2 366 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 MAP4K1Q92918 833 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CCDC94Q9BW85 323 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 PAG1Q9NWQ8 432 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ADGRB2O60241 1585 aa16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 RPAP1Q9BWH6 1393 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CYP21A2P08686 494 aa16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 SFPQP23246 707 aaKnown RBP eCLIP16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 NECTIN1Q15223 517 aa16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 CPLX3Q8WVH0 158 aa16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 IMMTQ16891 758 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 SLC4A8Q2Y0W8 1093 aa16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 FRMPD1Q5SYB0 1578 aa16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ARHGAP31Q2M1Z3 1444 aa16.78■□□□□ 0.28
TNFRSF1B-201ENST00000376259 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 AP5Z1O43299 807 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 URI1O94763 535 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 SLC3A2P08195 630 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 ZNF75DP51815 510 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 STX1AQ16623 288 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 DEPDC5O75140 1603 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 TAF5LO75529 589 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 MYL10Q9BUA6 226 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 IFNKQ9P0W0 207 aa16.77■□□□□ 0.28
TNFRSF1B-201ENST00000376259 FAM89AQ96GI7 184 aa16.77■□□□□ 0.27
TNFRSF1B-201ENST00000376259 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.27
TNFRSF1B-201ENST00000376259 CGNQ9P2M7 1197 aaKnown RBP16.77■□□□□ 0.27
TNFRSF1B-201ENST00000376259 PPLO60437 1756 aa16.77■□□□□ 0.27
TNFRSF1B-201ENST00000376259 AOX1Q06278 1338 aa16.77■□□□□ 0.27
TNFRSF1B-201ENST00000376259 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 CACTINQ8WUQ7 758 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 AXIN2Q9Y2T1 843 aa16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ARHGEF28Q8N1W1 1705 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 SCRN1Q12765 414 aa16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 IFNL2Q8IZJ0 200 aa16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ZNF213O14771 459 aa16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 LRRC24Q50LG9 513 aa16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 DHX32Q7L7V1 743 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1B-201ENST00000376259 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ZSCAN25Q6NSZ9 544 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 OLFM4Q6UX06 510 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 PI16Q6UXB8 463 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 KIAA1524Q8TCG1 905 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 KIF18AQ8NI77 898 aa16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 PUS3Q9BZE2 481 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ZFP91Q96JP5 570 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 A0A1B0GUL7 405 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 SYT10Q6XYQ8 523 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 PGBD1Q96JS3 809 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ZKSCAN3Q9BRR0 538 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ABCF2Q9UG63 623 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 PRC1O43663 620 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 GTF3C6Q969F1 213 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 KCNF1Q9H3M0 494 aa16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 CWC25Q9NXE8 425 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1B-201ENST00000376259 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 LRRFIP1Q32MZ4 808 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 TM6SF1Q9BZW5 370 aa16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 DNAI1Q9UI46 699 aa16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 MINDY4BA8MYZ0 360 aa16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 PHKBQ93100 1093 aa16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 SALL3Q9BXA9 1300 aa16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 SAFBQ15424 915 aaKnown RBP eCLIP16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ZSCAN16Q9H4T2 348 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-201ENST00000376259 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ADCY9O60503 1353 aa16.72■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ATP2B3Q16720 1220 aa16.72■□□□□ 0.27
TNFRSF1B-201ENST00000376259 IFIT5Q13325 482 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1B-201ENST00000376259 ELF2Q15723 593 aa16.71■□□□□ 0.27
TNFRSF1B-201ENST00000376259 CCDC144BQ3MJ40 725 aa16.71■□□□□ 0.27
TNFRSF1B-201ENST00000376259 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms