RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 XAGE2Q96GT9 111 aa20.89■□□□□ 0.93
PTPDC1-202ENST00000375360 APOBRQ0VD83 1088 aa20.89■□□□□ 0.93
PTPDC1-202ENST00000375360 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.93
PTPDC1-202ENST00000375360 CCDC194A0A1B0GVG4 234 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 ZSCAN22P10073 491 aaPredicted RBP20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 CCDC183Q5T5S1 534 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 ISM2Q6H9L7 571 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 KAT14Q9H8E8 782 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 CDC42BPBQ9Y5S2 1711 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 RTL1A6NKG5 1358 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 SNX21Q969T3 373 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 CCDC171Q6TFL3 1326 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 BEND3Q5T5X7 828 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 IQGAP3Q86VI3 1631 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 KCNQ4P56696 695 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 FAM177A1Q8N128 213 aaPredicted RBP20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 CNPY2Q9Y2B0 182 aa20.88■□□□□ 0.93
PTPDC1-202ENST00000375360 PDE8AO60658 829 aa20.87■□□□□ 0.93
PTPDC1-202ENST00000375360 TRMT1LQ7Z2T5 733 aaKnown RBP20.87■□□□□ 0.93
PTPDC1-202ENST00000375360 TCIRG1Q13488 830 aa20.87■□□□□ 0.93
PTPDC1-202ENST00000375360 STIM1Q13586 685 aa20.87■□□□□ 0.93
PTPDC1-202ENST00000375360 ESR2Q92731 530 aa20.87■□□□□ 0.93
PTPDC1-202ENST00000375360 MNS1Q8NEH6 495 aa20.87■□□□□ 0.93
PTPDC1-202ENST00000375360 CEP131Q9UPN4 1083 aa20.87■□□□□ 0.93
PTPDC1-202ENST00000375360 TANGO6Q9C0B7 1094 aa20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 SETD1BQ9UPS6 1966 aaKnown RBP20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 CNBD1Q8NA66 436 aa20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 ARAP3Q8WWN8 1544 aa20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 AXIN2Q9Y2T1 843 aa20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 MAGEB6P1A0A0J9YX57 407 aa20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 DNM1Q05193 864 aaKnown RBP20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 HSP90AA2PQ14568 343 aaPredicted RBP20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 EAF2Q96CJ1 260 aaPredicted RBP20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 BMP2KQ9NSY1 1161 aaPredicted RBP20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 SYNMO15061 1565 aa20.86■□□□□ 0.93
PTPDC1-202ENST00000375360 ZKSCAN3Q9BRR0 538 aa20.85■□□□□ 0.93
PTPDC1-202ENST00000375360 USP25Q9UHP3 1055 aa20.85■□□□□ 0.93
PTPDC1-202ENST00000375360 CFAP100Q494V2 611 aa20.85■□□□□ 0.93
PTPDC1-202ENST00000375360 PARP10Q53GL7 1025 aa20.85■□□□□ 0.93
PTPDC1-202ENST00000375360 SSH3Q8TE77 659 aa20.85■□□□□ 0.93
PTPDC1-202ENST00000375360 ALG1Q9BT22 464 aa20.85■□□□□ 0.93
PTPDC1-202ENST00000375360 MBD4O95243 580 aa20.85■□□□□ 0.93
PTPDC1-202ENST00000375360 TMEM132AQ24JP5 1023 aa20.84■□□□□ 0.93
PTPDC1-202ENST00000375360 IFIT1BQ5T764 474 aaKnown RBP20.84■□□□□ 0.93
PTPDC1-202ENST00000375360 GIMAP6Q6P9H5 292 aa20.84■□□□□ 0.93
PTPDC1-202ENST00000375360 DACH1Q9UI36 760 aa20.84■□□□□ 0.93
PTPDC1-202ENST00000375360 SGSM2O43147 1006 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 TSPY3P0CV98 308 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 TSPY8P0CW00 308 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 GSPT1P15170 499 aaKnown RBP20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 KRT23Q9C075 422 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 ESPNB1AK53 854 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 ZNF853P0CG23 659 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 DHX32Q7L7V1 743 aaKnown RBP20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 GOLGA6L1Q8N7Z2 621 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 CNNM3Q8NE01 707 aa20.83■□□□□ 0.93
PTPDC1-202ENST00000375360 KIF5BP33176 963 aa20.83■□□□□ 0.92
PTPDC1-202ENST00000375360 PPFIBP1Q86W92 1011 aa20.83■□□□□ 0.92
PTPDC1-202ENST00000375360 FEZ1Q99689 392 aa20.83■□□□□ 0.92
PTPDC1-202ENST00000375360 RNF17Q9BXT8 1623 aaKnown RBP20.83■□□□□ 0.92
PTPDC1-202ENST00000375360 BRINP3Q76B58 766 aa20.82■□□□□ 0.92
PTPDC1-202ENST00000375360 CARD10Q9BWT7 1032 aa20.82■□□□□ 0.92
PTPDC1-202ENST00000375360 RTN1Q16799 776 aa20.82■□□□□ 0.92
PTPDC1-202ENST00000375360 HLA-DOAP06340 250 aa20.82■□□□□ 0.92
PTPDC1-202ENST00000375360 USP48Q86UV5 1035 aa20.82■□□□□ 0.92
PTPDC1-202ENST00000375360 MAP3K4Q9Y6R4 1608 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 KLHL40Q2TBA0 621 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 RUFY3Q7L099 469 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 ZNF804AQ7Z570 1209 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 PARP3Q9Y6F1 533 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 ZAP70P43403 619 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 PUM3Q15397 648 aaKnown RBP20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 CT47A1Q5JQC4 288 aaPredicted RBP20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 UBE2HP62256 183 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 BCORL1Q5H9F3 1711 aa20.81■□□□□ 0.92
PTPDC1-202ENST00000375360 CCDC70Q6NSX1 233 aa20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 PRDM1O75626 825 aa20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 MARCKSP29966 332 aaPredicted RBP20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 RBM25P49756 843 aaKnown RBP20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 GSTO1P78417 241 aa20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 KBTBD3Q8NAB2 608 aa20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 ANO10Q9NW15 660 aa20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 ZBTB1Q9Y2K1 713 aa20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
PTPDC1-202ENST00000375360 LDHBP07195 334 aaKnown RBP20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 WDR78Q5VTH9 848 aa20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 SMARCE1Q969G3 411 aa20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 ARMT1Q9H993 441 aa20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.922e-7■■■■■ 33.7
PTPDC1-202ENST00000375360 CLASP1Q7Z460 1538 aa20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 LRRC24Q50LG9 513 aa20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 WDR17Q8IZU2 1322 aa20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 B4E1Z4 1266 aa20.79■□□□□ 0.92
PTPDC1-202ENST00000375360 LOC102724428A0A0B4J2F2 783 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 GPAA1O43292 621 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 F13A1P00488 732 aa20.78■□□□□ 0.92
PTPDC1-202ENST00000375360 SIK1P57059 783 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms