RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 VPS36Q86VN1 386 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
PTCH1-203ENST00000375274 FEZ1Q99689 392 aa13.24□□□□□ -0.29
PTCH1-203ENST00000375274 GTPBP4Q9BZE4 634 aaKnown RBP13.24□□□□□ -0.29
PTCH1-203ENST00000375274 IGSF3O75054 1194 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 AFMP43652 599 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 ATP2B3Q16720 1220 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 CTR9Q6PD62 1173 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 SPAG1Q07617 926 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-203ENST00000375274 BRD1O95696 1058 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 ZNF76P36508 570 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 SEPT7Q16181 437 aaKnown RBP13.23□□□□□ -0.29
PTCH1-203ENST00000375274 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-203ENST00000375274 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-203ENST00000375274 JADE2Q9NQC1 790 aa13.23□□□□□ -0.29
PTCH1-203ENST00000375274 BMP15O95972 392 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 KIF5BP33176 963 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 TMEM266Q2M3C6 531 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 ALS2CR12Q96Q35 445 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 MAP3K5Q99683 1374 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 PNMA6EA0A0J9YXQ4 647 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 GADD45BO75293 160 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-203ENST00000375274 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 SLC9C2Q5TAH2 1124 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 SYT10Q6XYQ8 523 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 LIG1P18858 919 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
PTCH1-203ENST00000375274 MEX3CQ5U5Q3 659 aaKnown RBP13.22□□□□□ -0.29
PTCH1-203ENST00000375274 EHBP1Q8NDI1 1231 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 UHRF1BP1LA0JNW5 1464 aa13.22□□□□□ -0.29
PTCH1-203ENST00000375274 TSPY2A6NKD2 308 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 AKR1B10O60218 316 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 CCDC175P0C221 793 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
PTCH1-203ENST00000375274 AMPD3Q01432 767 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 HLTFQ14527 1009 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTCH1-203ENST00000375274 RTN1Q16799 776 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 ATL3Q6DD88 541 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 NAA15Q9BXJ9 866 aaKnown RBP13.21□□□□□ -0.29
PTCH1-203ENST00000375274 KRT23Q9C075 422 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 KIF20AO95235 890 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 AOX1Q06278 1338 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 MYRIPQ8NFW9 859 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.29
PTCH1-203ENST00000375274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.29
PTCH1-203ENST00000375274 ZNF521Q96K83 1311 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 NBPF7P0C2Y1 421 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-203ENST00000375274 BRAPQ7Z569 592 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 GAS2L3Q86XJ1 694 aa13.21□□□□□ -0.29
PTCH1-203ENST00000375274 C17orf53Q8N3J3 647 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-203ENST00000375274 TNRQ92752 1358 aa13.21□□□□□ -0.3
PTCH1-203ENST00000375274 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.3
PTCH1-203ENST00000375274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.21□□□□□ -0.3
PTCH1-203ENST00000375274 A0A1B0GVL5 298 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 CNNM2Q9H8M5 875 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 RPS6KB1P23443 525 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 FAM114A1Q8IWE2 563 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 LRRC59Q96AG4 307 aaKnown RBP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 PPP1R9BQ96SB3 815 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 BICC1Q9H694 974 aaKnown RBP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 RMND1Q9NWS8 449 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 IFFO1Q0D2I5 559 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 DHX37Q8IY37 1157 aaKnown RBP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 ASXL2Q76L83 1435 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
PTCH1-203ENST00000375274 HSPA4P34932 840 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 TFCP2Q12800 502 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 ESR2Q92731 530 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 UBA5Q9GZZ9 404 aa13.2□□□□□ -0.3
PTCH1-203ENST00000375274 DISP1Q96F81 1524 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 ABCC4O15439 1325 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTCH1-203ENST00000375274 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 SLC27A2O14975 620 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 CYLC1P35663 651 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-203ENST00000375274 PDE4BQ07343 736 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 CCDC40Q4G0X9 1142 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms