RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ANKRD36CQ5JPF3 1778 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 H7C1W4 665 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 HMGB1P09429 215 aaKnown RBP14.56□□□□□ -0.08
UBR4-203ENST00000375225 SYT1P21579 422 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 MSNP26038 577 aaKnown RBP14.56□□□□□ -0.08
UBR4-203ENST00000375225 GJB2P29033 226 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 FAM227BQ96M60 508 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 HAUS7Q99871 368 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 ZBTB3Q9H5J0 574 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 CCDC87Q9NVE4 849 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
UBR4-203ENST00000375225 LY75O60449 1722 aa14.55□□□□□ -0.08
UBR4-203ENST00000375225 TFCP2Q12800 502 aa14.55□□□□□ -0.08
UBR4-203ENST00000375225 KRT27Q7Z3Y8 459 aa14.55□□□□□ -0.08
UBR4-203ENST00000375225 USP48Q86UV5 1035 aa14.55□□□□□ -0.08
UBR4-203ENST00000375225 TMEM63CQ9P1W3 806 aa14.55□□□□□ -0.08
UBR4-203ENST00000375225 ZBTB1Q9Y2K1 713 aa14.55□□□□□ -0.08
UBR4-203ENST00000375225 CHMP3Q9Y3E7 222 aa14.55□□□□□ -0.08
UBR4-203ENST00000375225 SPEF2Q9C093 1822 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 SYCE3A1L190 88 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 CIAO1O76071 339 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 RPS6KB1P23443 525 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 CRKLP46109 303 aaKnown RBP14.54□□□□□ -0.08
UBR4-203ENST00000375225 UVSSAQ2YD98 709 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 MCMDC2Q4G0Z9 681 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 HSP90AB3PQ58FF7 597 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 EPHA10Q5JZY3 1008 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 LMBR1LQ6UX01 489 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 FAM196AQ6ZSG2 479 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 ZSCAN30Q86W11 494 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 TLR7Q9NYK1 1049 aaKnown RBP14.54□□□□□ -0.08
UBR4-203ENST00000375225 RBM27Q9P2N5 1060 aaKnown RBP14.54□□□□□ -0.08
UBR4-203ENST00000375225 MAP3K15Q6ZN16 1313 aa14.54□□□□□ -0.08
UBR4-203ENST00000375225 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
UBR4-203ENST00000375225 CASP7P55210 303 aa14.53□□□□□ -0.08
UBR4-203ENST00000375225 FAM182BQ5T319 152 aa14.53□□□□□ -0.08
UBR4-203ENST00000375225 USPL1Q5W0Q7 1092 aa14.53□□□□□ -0.08
UBR4-203ENST00000375225 HELLSQ9NRZ9 838 aa14.53□□□□□ -0.08
UBR4-203ENST00000375225 DBNLQ9UJU6 430 aaKnown RBP14.53□□□□□ -0.08
UBR4-203ENST00000375225 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
UBR4-203ENST00000375225 SH3TC1Q8TE82 1336 aa14.53□□□□□ -0.08
UBR4-203ENST00000375225 ATP5J2-PTCD1G3V325 749 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 MCM5P33992 734 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 ITPK1Q13572 414 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 ADCK5Q3MIX3 580 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 KBTBD3Q8NAB2 608 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.52□□□□□ -0.08
UBR4-203ENST00000375225 BCL11BQ9C0K0 894 aaPredicted RBP14.52□□□□□ -0.08
UBR4-203ENST00000375225 RBSNQ9H1K0 784 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 AKAP2Q9Y2D5 859 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 NUP98P52948 1817 aa14.52□□□□□ -0.08
UBR4-203ENST00000375225 TAF5LO75529 589 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 KRT85P78386 507 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 DZIP3Q86Y13 1208 aaKnown RBP14.51□□□□□ -0.09
UBR4-203ENST00000375225 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 DNAJC2Q99543 621 aaKnown RBP14.51□□□□□ -0.09
UBR4-203ENST00000375225 CCDC39Q9UFE4 941 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 TAF1LQ8IZX4 1826 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
UBR4-203ENST00000375225 ERVV-1B6SEH8 477 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 RXRBP28702 533 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 FOXO4P98177 505 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 TCIRG1Q13488 830 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
UBR4-203ENST00000375225 INTS5Q6P9B9 1019 aaKnown RBP14.51□□□□□ -0.09
UBR4-203ENST00000375225 GIGYF2Q6Y7W6 1299 aaKnown RBP14.51□□□□□ -0.09
UBR4-203ENST00000375225 NEK1Q96PY6 1258 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 CNTNAP4Q9C0A0 1308 aa14.51□□□□□ -0.09
UBR4-203ENST00000375225 VPS37CA5D8V6 355 aaPredicted RBP14.5□□□□□ -0.09
UBR4-203ENST00000375225 EYA2O00167 538 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 EIF5P55010 431 aaKnown RBP14.5□□□□□ -0.09
UBR4-203ENST00000375225 ME3Q16798 604 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 BCORQ6W2J9 1755 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 PDLIM2Q96JY6 352 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 DBNDD2Q9BQY9 259 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 ISCA1Q9BUE6 129 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 DSCC1Q9BVC3 393 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
UBR4-203ENST00000375225 MTMR6Q9Y217 621 aa14.5□□□□□ -0.09
UBR4-203ENST00000375225 TRIM28Q13263 835 aaKnown RBP14.49□□□□□ -0.09
UBR4-203ENST00000375225 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
UBR4-203ENST00000375225 NEUROD6Q96NK8 337 aa14.49□□□□□ -0.09
UBR4-203ENST00000375225 PAG1Q9NWQ8 432 aa14.49□□□□□ -0.09
UBR4-203ENST00000375225 CEP126Q9P2H0 1117 aa14.49□□□□□ -0.09
UBR4-203ENST00000375225 CNPY2Q9Y2B0 182 aa14.49□□□□□ -0.09
UBR4-203ENST00000375225 ABCC12Q96J65 1359 aa14.48□□□□□ -0.09
UBR4-203ENST00000375225 ZFYP08048 801 aaPredicted RBP14.48□□□□□ -0.09
UBR4-203ENST00000375225 CPA1P15085 419 aa14.48□□□□□ -0.09
UBR4-203ENST00000375225 HMGB2P26583 209 aaKnown RBP14.48□□□□□ -0.09
UBR4-203ENST00000375225 FGD1P98174 961 aa14.48□□□□□ -0.09
UBR4-203ENST00000375225 CCDC158Q5M9N0 1113 aa14.48□□□□□ -0.09
UBR4-203ENST00000375225 RC3H1Q5TC82 1133 aaKnown RBP14.48□□□□□ -0.09
UBR4-203ENST00000375225 PTF1AQ7RTS3 328 aa14.48□□□□□ -0.09
UBR4-203ENST00000375225 LINC00116Q8NCU8 138 aa14.48□□□□□ -0.09
UBR4-203ENST00000375225 LLPHQ9BRT6 129 aaKnown RBP14.48□□□□□ -0.09
UBR4-203ENST00000375225 SCAND2PQ9GZW5 306 aaPredicted RBP14.48□□□□□ -0.09
UBR4-203ENST00000375225 TPCN1Q9ULQ1 816 aa14.48□□□□□ -0.09
UBR4-203ENST00000375225 TCHHQ07283 1943 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms