RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TPCN1Q9ULQ1 816 aa20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 WDR33Q9C0J8 1336 aaKnown RBP20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 FAM193AP78312 1265 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 CCDC171Q6TFL3 1326 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 A0A0G2JLW4 131 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 LUZP1Q86V48 1076 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 CCDC112Q8NEF3 446 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 ZNF397Q8NF99 534 aaPredicted RBP20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 GOLGA6L6A8MZA4 724 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 STX6O43752 255 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 TNNT1P13805 278 aa20.37■□□□□ 0.85
LDLRAP1-201ENST00000374338 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 CYP46A1Q9Y6A2 500 aa20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 PTPN12Q05209 780 aaKnown RBP20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 CCDC186Q7Z3E2 898 aa20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 INTS4Q96HW7 963 aaKnown RBP20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 PRDM11Q9NQV5 511 aa20.36■□□□□ 0.85
LDLRAP1-201ENST00000374338 RBM6P78332 1123 aaKnown RBP20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 RUFY2Q8WXA3 655 aa20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 A0A0G2JS52 829 aa20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 SLC27A2O14975 620 aa20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 CYP2C19P33261 490 aa20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 NECTIN1Q15223 517 aa20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 ERC1Q8IUD2 1116 aa20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 PAXBP1Q9Y5B6 917 aa20.35■□□□□ 0.85
LDLRAP1-201ENST00000374338 NPHP1O15259 732 aa20.34■□□□□ 0.85
LDLRAP1-201ENST00000374338 CREBRFQ8IUR6 639 aa20.34■□□□□ 0.85
LDLRAP1-201ENST00000374338 DRC7Q8IY82 874 aa20.34■□□□□ 0.85
LDLRAP1-201ENST00000374338 CKAP2LQ8IYA6 745 aa20.34■□□□□ 0.85
LDLRAP1-201ENST00000374338 FMNL2Q96PY5 1086 aa20.34■□□□□ 0.85
LDLRAP1-201ENST00000374338 FUCA2Q9BTY2 467 aa20.34■□□□□ 0.85
LDLRAP1-201ENST00000374338 ZSCAN22P10073 491 aaPredicted RBP20.33■□□□□ 0.85
LDLRAP1-201ENST00000374338 HSP90AB3PQ58FF7 597 aa20.33■□□□□ 0.85
LDLRAP1-201ENST00000374338 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.85
LDLRAP1-201ENST00000374338 DDX11Q96FC9 970 aa20.33■□□□□ 0.85
LDLRAP1-201ENST00000374338 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.85
LDLRAP1-201ENST00000374338 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.85
LDLRAP1-201ENST00000374338 RAD51AP2Q09MP3 1159 aa20.33■□□□□ 0.85
LDLRAP1-201ENST00000374338 UBE2HP62256 183 aa20.33■□□□□ 0.84
LDLRAP1-201ENST00000374338 CHST3Q7LGC8 479 aa20.33■□□□□ 0.84
LDLRAP1-201ENST00000374338 TFIP11Q9UBB9 837 aaKnown RBP20.33■□□□□ 0.84
LDLRAP1-201ENST00000374338 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
LDLRAP1-201ENST00000374338 DCAF5Q96JK2 942 aa20.32■□□□□ 0.84
LDLRAP1-201ENST00000374338 SNRKQ9NRH2 765 aa20.32■□□□□ 0.84
LDLRAP1-201ENST00000374338 LRRC24Q50LG9 513 aa20.32■□□□□ 0.84
LDLRAP1-201ENST00000374338 TNNI3KQ59H18 835 aa20.32■□□□□ 0.84
LDLRAP1-201ENST00000374338 FPGT-TNNI3KV9GXZ4 949 aa20.32■□□□□ 0.84
LDLRAP1-201ENST00000374338 PUS3Q9BZE2 481 aaKnown RBP20.31■□□□□ 0.84
LDLRAP1-201ENST00000374338 COL15A1P39059 1388 aa20.31■□□□□ 0.84
LDLRAP1-201ENST00000374338 VPS53Q5VIR6 699 aa20.31■□□□□ 0.84
LDLRAP1-201ENST00000374338 EFCC1Q9HA90 598 aa20.31■□□□□ 0.84
LDLRAP1-201ENST00000374338 FBXO38Q6PIJ6 1188 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 CDC37L1Q7L3B6 337 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 NOL10Q9BSC4 688 aaKnown RBP20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 USP42Q9H9J4 1324 aaKnown RBP20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 GOLIM4O00461 696 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 F13A1P00488 732 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 TMEM87AQ8NBN3 555 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 SLIT3O75094 1523 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 JAK2O60674 1132 aa20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
LDLRAP1-201ENST00000374338 TNNT3P45378 269 aaPredicted RBP20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 CEBPZQ03701 1054 aaKnown RBP20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 CHMP4CQ96CF2 233 aa20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 YY1AP1Q9H869 796 aa20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 MTMR6Q9Y217 621 aa20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 C5P01031 1676 aa20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 GOLGB1Q14789 3259 aaKnown RBP20.29■□□□□ 0.84
LDLRAP1-201ENST00000374338 ARID5BQ14865 1188 aa20.28■□□□□ 0.84
LDLRAP1-201ENST00000374338 LARP1BQ659C4 914 aaKnown RBP20.28■□□□□ 0.84
LDLRAP1-201ENST00000374338 ZNF215Q9UL58 517 aaPredicted RBP20.28■□□□□ 0.84
LDLRAP1-201ENST00000374338 MST1RQ04912 1400 aa20.28■□□□□ 0.84
LDLRAP1-201ENST00000374338 BLOC1S2Q6QNY1 142 aa20.28■□□□□ 0.84
LDLRAP1-201ENST00000374338 RSPH14Q9UHP6 348 aa20.27■□□□□ 0.84
LDLRAP1-201ENST00000374338 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
LDLRAP1-201ENST00000374338 UTYO14607 1347 aa20.27■□□□□ 0.84
LDLRAP1-201ENST00000374338 USP54Q70EL1 1684 aa20.27■□□□□ 0.84
LDLRAP1-201ENST00000374338 LIG1P18858 919 aa20.27■□□□□ 0.84
LDLRAP1-201ENST00000374338 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 RAB11FIP4Q86YS3 637 aa20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 USP27XA6NNY8 438 aa20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 BRINP3Q76B58 766 aa20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 ZCRB1Q8TBF4 217 aaKnown RBP20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 ZNF446Q9NWS9 450 aa20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 TAF5LO75529 589 aa20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 TRIM5Q9C035 493 aa20.26■□□□□ 0.83
LDLRAP1-201ENST00000374338 GPTP24298 496 aa20.25■□□□□ 0.83
LDLRAP1-201ENST00000374338 TOB2Q14106 344 aaPredicted RBP20.25■□□□□ 0.83
LDLRAP1-201ENST00000374338 TPD52L1Q16890 204 aaPredicted RBP20.25■□□□□ 0.83
LDLRAP1-201ENST00000374338 SYTL4Q96C24 671 aaPredicted RBP20.25■□□□□ 0.83
LDLRAP1-201ENST00000374338 FAM89AQ96GI7 184 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms