RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 IFIT5Q13325 482 aaKnown RBP19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 SCARF1Q14162 830 aa19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 ZBTB38Q8NAP3 1195 aaPredicted RBP19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 BCL9O00512 1426 aa19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 NLRP10Q86W26 655 aa19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 FAM43AQ8N2R8 423 aa19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 XAGE2Q96GT9 111 aa19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 MTMR6Q9Y217 621 aa19.06■□□□□ 0.64
CNKSR1-202ENST00000374253 ROBO1Q9Y6N7 1651 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 DISP2A7MBM2 1401 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 JCADQ9P266 1359 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 FAM173BQ6P4H8 233 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 STOX1Q6ZVD7 989 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 NEK1Q96PY6 1258 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 DNM1Q05193 864 aaKnown RBP19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 USPL1Q5W0Q7 1092 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 RNF214Q8ND24 703 aa19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 TRMT112Q9UI30 125 aaKnown RBP19.05■□□□□ 0.64
CNKSR1-202ENST00000374253 PPFIA3O75145 1194 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 CIAO1O76071 339 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 MBD3O95983 291 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 PRKCSHP14314 528 aaPredicted RBP19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 TTC39AQ5SRH9 613 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 GPR108Q9NPR9 543 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 HMG20BQ9P0W2 317 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 ITGA6P23229 1130 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 Q6ZUG5 572 aa19.04■□□□□ 0.64
CNKSR1-202ENST00000374253 M0R2C6 588 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 HSP90B1P14625 803 aaKnown RBP19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 TRIM28Q13263 835 aaKnown RBP19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 CHST3Q7LGC8 479 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 U3KPZ7 1027 aaPredicted RBP19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 MAST3O60307 1309 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 METTL24Q5JXM2 366 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 TTLL5Q6EMB2 1281 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 LDHAL6AQ6ZMR3 332 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 CDC37L1Q7L3B6 337 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 DZIP3Q86Y13 1208 aaKnown RBP19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 TTLL11Q8NHH1 800 aa19.03■□□□□ 0.64
CNKSR1-202ENST00000374253 IRS4O14654 1257 aaPredicted RBP19.02■□□□□ 0.64
CNKSR1-202ENST00000374253 JAK2O60674 1132 aa19.02■□□□□ 0.64
CNKSR1-202ENST00000374253 SH3TC1Q8TE82 1336 aa19.02■□□□□ 0.64
CNKSR1-202ENST00000374253 FGD1P98174 961 aa19.02■□□□□ 0.63
CNKSR1-202ENST00000374253 CCDC158Q5M9N0 1113 aa19.02■□□□□ 0.63
CNKSR1-202ENST00000374253 BRF1Q92994 677 aa19.02■□□□□ 0.63
CNKSR1-202ENST00000374253 CSF1RP07333 972 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 ZAP70P43403 619 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 WASHC4Q2M389 1173 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 ZMYM1Q5SVZ6 1142 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 OSBP2Q969R2 916 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 CNNM1Q9NRU3 951 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 UBN2Q6ZU65 1347 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 RNF113AO15541 343 aaKnown RBP19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 HSPD1P10809 573 aaKnown RBP19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 TSGA10IPQ3SY00 556 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 LRSAM1Q6UWE0 723 aa19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 HELBQ8NG08 1087 aaPredicted RBP19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 COL16A1Q07092 1604 aaPredicted RBP19.01■□□□□ 0.63
CNKSR1-202ENST00000374253 COL14A1Q05707 1796 aaKnown RBP19■□□□□ 0.63
CNKSR1-202ENST00000374253 FOSBP53539 338 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 ANKRD1Q15327 319 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 DDX11Q96FC9 970 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 NAP1L2Q9ULW6 460 aaPredicted RBP19■□□□□ 0.63
CNKSR1-202ENST00000374253 CTSWP56202 376 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 HAND2P61296 217 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 PIP4K2BP78356 416 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 KRT32Q14532 448 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 DDB1Q16531 1140 aa19■□□□□ 0.63
CNKSR1-202ENST00000374253 TRIM44Q96DX7 344 aaPredicted RBP19■□□□□ 0.63
CNKSR1-202ENST00000374253 RFX7Q2KHR2 1363 aa18.99■□□□□ 0.63
CNKSR1-202ENST00000374253 SNAP23O00161 211 aa18.99■□□□□ 0.63
CNKSR1-202ENST00000374253 HCLS1P14317 486 aaPredicted RBP18.99■□□□□ 0.63
CNKSR1-202ENST00000374253 ATP2B3Q16720 1220 aa18.99■□□□□ 0.63
CNKSR1-202ENST00000374253 HELLSQ9NRZ9 838 aa18.99■□□□□ 0.63
CNKSR1-202ENST00000374253 PLA2G12BQ9BX93 195 aa18.98■□□□□ 0.63
CNKSR1-202ENST00000374253 AKAP2Q9Y2D5 859 aa18.98■□□□□ 0.63
CNKSR1-202ENST00000374253 RIPOR2Q9Y4F9 1068 aa18.98■□□□□ 0.63
CNKSR1-202ENST00000374253 ATP6V1AP38606 617 aa18.98■□□□□ 0.63
CNKSR1-202ENST00000374253 RIC1Q4ADV7 1423 aa18.98■□□□□ 0.63
CNKSR1-202ENST00000374253 ANKRD18BA2A2Z9 1011 aa18.97■□□□□ 0.63
CNKSR1-202ENST00000374253 APOBRQ0VD83 1088 aa18.97■□□□□ 0.63
CNKSR1-202ENST00000374253 MARCH10Q8NA82 808 aaPredicted RBP18.97■□□□□ 0.63
CNKSR1-202ENST00000374253 ANP32BQ92688 251 aaKnown RBP18.97■□□□□ 0.63
CNKSR1-202ENST00000374253 PUS7LQ9H0K6 701 aaKnown RBP18.97■□□□□ 0.63
CNKSR1-202ENST00000374253 MCAMP43121 646 aa18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 KCNQ4P56696 695 aa18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 CCT2P78371 535 aaKnown RBP18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 GTF3C6Q969F1 213 aa18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 ATP6V1DQ9Y5K8 247 aa18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 LRP6O75581 1613 aa18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 E7EWF7 191 aa18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 GPHNQ9NQX3 736 aaPredicted RBP18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 TFIP11Q9UBB9 837 aaKnown RBP18.96■□□□□ 0.63
CNKSR1-202ENST00000374253 SPATA31A1Q5TZJ5 1347 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 KCNQ2O43526 872 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 SCRN1Q12765 414 aa18.95■□□□□ 0.62
CNKSR1-202ENST00000374253 TMEM87AQ8NBN3 555 aa18.95■□□□□ 0.62
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