RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 TICAM2Q86XR7 235 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.41■■□□□ 1.02
CTSA-204ENST00000372484 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 C8orf37Q96NL8 207 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 SPEF2Q9C093 1822 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 TTC39AQ5SRH9 613 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 NGLY1Q96IV0 654 aa21.41■■□□□ 1.02
CTSA-204ENST00000372484 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.41■■□□□ 1.02
CTSA-204ENST00000372484 MYH14Q7Z406 1995 aaKnown RBP21.4■■□□□ 1.02
CTSA-204ENST00000372484 KCNQ2O43526 872 aa21.4■■□□□ 1.02
CTSA-204ENST00000372484 ADORA1P30542 326 aa21.4■■□□□ 1.02
CTSA-204ENST00000372484 METTL24Q5JXM2 366 aa21.4■■□□□ 1.02
CTSA-204ENST00000372484 RIPOR2Q9Y4F9 1068 aa21.4■■□□□ 1.02
CTSA-204ENST00000372484 TSGA10IPQ3SY00 556 aa21.4■■□□□ 1.02
CTSA-204ENST00000372484 L1TD1Q5T7N2 865 aaKnown RBP21.4■■□□□ 1.02
CTSA-204ENST00000372484 BLOC1S2Q6QNY1 142 aa21.4■■□□□ 1.02
CTSA-204ENST00000372484 SMARCC1Q92922 1105 aaPredicted RBP21.4■■□□□ 1.02
CTSA-204ENST00000372484 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
CTSA-204ENST00000372484 CNNM1Q9NRU3 951 aa21.4■■□□□ 1.02
CTSA-204ENST00000372484 DDX49Q9Y6V7 483 aaKnown RBP21.4■■□□□ 1.02
CTSA-204ENST00000372484 GOLGA6L3A6NEY3 463 aa21.39■■□□□ 1.01
CTSA-204ENST00000372484 FKBP4Q02790 459 aaKnown RBP eCLIP21.39■■□□□ 1.01
CTSA-204ENST00000372484 HELLSQ9NRZ9 838 aa21.39■■□□□ 1.01
CTSA-204ENST00000372484 TAF6LQ9Y6J9 622 aa21.39■■□□□ 1.01
CTSA-204ENST00000372484 U3KPZ7 1027 aaPredicted RBP21.39■■□□□ 1.01
CTSA-204ENST00000372484 RIC1Q4ADV7 1423 aa21.39■■□□□ 1.01
CTSA-204ENST00000372484 LARGE1O95461 756 aa21.38■■□□□ 1.01
CTSA-204ENST00000372484 SH2B1Q9NRF2 756 aaPredicted RBP21.38■■□□□ 1.01
CTSA-204ENST00000372484 RREB1Q92766 1687 aa21.38■■□□□ 1.01
CTSA-204ENST00000372484 CICQ96RK0 1608 aaPredicted RBP21.38■■□□□ 1.01
CTSA-204ENST00000372484 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
CTSA-204ENST00000372484 KLHL40Q2TBA0 621 aa21.38■■□□□ 1.01
CTSA-204ENST00000372484 LMBRD1Q9NUN5 540 aa21.38■■□□□ 1.01
CTSA-204ENST00000372484 KRT32Q14532 448 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 VPS72Q15906 364 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 SLFNL1Q499Z3 407 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 SUSD4Q5VX71 490 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 BCL9LQ86UU0 1499 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
CTSA-204ENST00000372484 ZMYM1Q5SVZ6 1142 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 AK7Q96M32 723 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 SMC3Q9UQE7 1217 aa21.37■■□□□ 1.01
CTSA-204ENST00000372484 FSD2A1L4K1 749 aa21.36■■□□□ 1.01
CTSA-204ENST00000372484 RNF113AO15541 343 aaKnown RBP21.36■■□□□ 1.01
CTSA-204ENST00000372484 CAMTA2O94983 1202 aa21.36■■□□□ 1.01
CTSA-204ENST00000372484 RPS6KB1P23443 525 aa21.36■■□□□ 1.01
CTSA-204ENST00000372484 COL9A3Q14050 684 aaPredicted RBP21.36■■□□□ 1.01
CTSA-204ENST00000372484 CCDC83Q8IWF9 413 aa21.36■■□□□ 1.01
CTSA-204ENST00000372484 FAM177BA6PVY3 158 aa21.35■■□□□ 1.01
CTSA-204ENST00000372484 PRPF40AO75400 957 aaKnown RBP21.35■■□□□ 1.01
CTSA-204ENST00000372484 ANKRD1Q15327 319 aa21.35■■□□□ 1.01
CTSA-204ENST00000372484 CHAMP1Q96JM3 812 aa21.35■■□□□ 1.01
CTSA-204ENST00000372484 UTP14AQ9BVJ6 771 aaKnown RBP21.35■■□□□ 1.01
CTSA-204ENST00000372484 ME3Q16798 604 aa21.35■■□□□ 1.01
CTSA-204ENST00000372484 LRRFIP1Q32MZ4 808 aaKnown RBP21.35■■□□□ 1.01
CTSA-204ENST00000372484 TCEANC2Q96MN5 208 aa21.35■■□□□ 1.01
CTSA-204ENST00000372484 HCLS1P14317 486 aaPredicted RBP21.34■■□□□ 1.01
CTSA-204ENST00000372484 PARP10Q53GL7 1025 aa21.34■■□□□ 1.01
CTSA-204ENST00000372484 TPCN1Q9ULQ1 816 aa21.34■■□□□ 1.01
CTSA-204ENST00000372484 CYP21A2P08686 494 aa21.34■■□□□ 1.01
CTSA-204ENST00000372484 SCARF1Q14162 830 aa21.34■■□□□ 1.01
CTSA-204ENST00000372484 ALDH8A1Q9H2A2 487 aaPredicted RBP21.34■■□□□ 1.01
CTSA-204ENST00000372484 COL5A3P25940 1745 aaPredicted RBP21.33■■□□□ 1.01
CTSA-204ENST00000372484 VGLL2Q8N8G2 317 aa21.33■■□□□ 1.01
CTSA-204ENST00000372484 NEK1Q96PY6 1258 aa21.33■■□□□ 1.01
CTSA-204ENST00000372484 DSCC1Q9BVC3 393 aa21.33■■□□□ 1.01
CTSA-204ENST00000372484 MAST3O60307 1309 aa21.33■■□□□ 1
CTSA-204ENST00000372484 ABCC12Q96J65 1359 aa21.33■■□□□ 1
CTSA-204ENST00000372484 PDE8BO95263 885 aa21.32■■□□□ 1
CTSA-204ENST00000372484 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
CTSA-204ENST00000372484 NCLP19338 710 aaKnown RBP21.32■■□□□ 1
CTSA-204ENST00000372484 ZAP70P43403 619 aa21.32■■□□□ 1
CTSA-204ENST00000372484 BRPF3Q9ULD4 1205 aa21.32■■□□□ 1
CTSA-204ENST00000372484 NECAB1Q8N987 351 aa21.31■■□□□ 1
CTSA-204ENST00000372484 STX6O43752 255 aa21.31■■□□□ 1
CTSA-204ENST00000372484 ZFYP08048 801 aaPredicted RBP21.31■■□□□ 1
CTSA-204ENST00000372484 HSPD1P10809 573 aaKnown RBP21.31■■□□□ 1
CTSA-204ENST00000372484 SYT1P21579 422 aa21.31■■□□□ 1
CTSA-204ENST00000372484 GJB2P29033 226 aa21.31■■□□□ 1
CTSA-204ENST00000372484 TOB2Q14106 344 aaPredicted RBP21.31■■□□□ 1
CTSA-204ENST00000372484 FNBP4Q8N3X1 1017 aaPredicted RBP21.31■■□□□ 1
CTSA-204ENST00000372484 ISY1Q9ULR0 285 aaKnown RBP21.31■■□□□ 1
CTSA-204ENST00000372484 ZNF831Q5JPB2 1677 aa21.3■■□□□ 1
CTSA-204ENST00000372484 ST3GAL1Q11201 340 aa21.3■■□□□ 1
CTSA-204ENST00000372484 PI16Q6UXB8 463 aa21.3■■□□□ 1
CTSA-204ENST00000372484 ZNF652Q9Y2D9 606 aa21.3■■□□□ 1
CTSA-204ENST00000372484 MROH5Q6ZUA9 1318 aa21.3■■□□□ 1
CTSA-204ENST00000372484 AKAP11Q9UKA4 1901 aa21.3■■□□□ 1
CTSA-204ENST00000372484 M0R2C6 588 aa21.29■■□□□ 1
CTSA-204ENST00000372484 WASHC4Q2M389 1173 aa21.29■■□□□ 1
CTSA-204ENST00000372484 OSBP2Q969R2 916 aa21.29■■□□□ 1
CTSA-204ENST00000372484 LRP5O75197 1615 aa21.29■■□□□ 1
CTSA-204ENST00000372484 MYH7P12883 1935 aa21.29■■□□□ 1
CTSA-204ENST00000372484 DDX60Q8IY21 1712 aaKnown RBP21.29■■□□□ 1
CTSA-204ENST00000372484 ZSCAN22P10073 491 aaPredicted RBP21.29■■□□□ 1
CTSA-204ENST00000372484 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
CTSA-204ENST00000372484 MCAMP43121 646 aa21.29■■□□□ 1
CTSA-204ENST00000372484 FOXD4L6Q3SYB3 417 aaPredicted RBP21.29■■□□□ 1
CTSA-204ENST00000372484 FOXD4L3Q6VB84 417 aaPredicted RBP21.29■■□□□ 1
CTSA-204ENST00000372484 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms