RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MRPL46Q9H2W6 279 aaKnown RBP17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 LUC7L3O95232 432 aaKnown RBP17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 ZNF569Q5MCW4 686 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 NUCKS1Q9H1E3 243 aaKnown RBP17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 TUBB4AP04350 444 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 TRPC3Q13507 836 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 MAP3K7CLP57077 242 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 TMED1Q13445 227 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 RAB11FIP4Q86YS3 637 aa17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
GTF3C4-201ENST00000372146 GABPB1Q06547 395 aaPredicted RBP17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 VCX3AQ9NNX9 186 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 AK9Q5TCS8 1911 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 CCDC65Q8IXS2 484 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 ABTB1Q969K4 478 aaPredicted RBP17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 MX2P20592 715 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 SYT10Q6XYQ8 523 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 RIPOR2Q9Y4F9 1068 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 INPP1P49441 399 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 SESN3P58005 492 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 PPARDQ03181 441 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
GTF3C4-201ENST00000372146 BAIAP2L1Q9UHR4 511 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 MYL6BP14649 208 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 NUTM1Q86Y26 1132 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 TCP11L1Q9NUJ3 509 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 AOPEPQ8N6M6 819 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 KRT83P78385 493 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 CCT6BQ92526 530 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 E7EVH7 732 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 FRMD4BQ9Y2L6 1034 aa17.31■□□□□ 0.36
GTF3C4-201ENST00000372146 SYKP43405 635 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 EVCP57679 992 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 HVCN1Q96D96 273 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 RNF8O76064 485 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 MTHFSP49914 203 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 PYM1Q9BRP8 204 aaKnown RBP17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 RMND1Q9NWS8 449 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 CCDC102BQ68D86 513 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 CCDC122Q5T0U0 273 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 UTP11Q9Y3A2 253 aaKnown RBP17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 CAPN7Q9Y6W3 813 aa17.3■□□□□ 0.36
GTF3C4-201ENST00000372146 CCDC194A0A1B0GVG4 234 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 PLCB3Q01970 1234 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 KIAA1524Q8TCG1 905 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 TBC1D31Q96DN5 1066 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 A6NNZ2 444 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 TUBB8Q3ZCM7 444 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 TTC21AQ8NDW8 1320 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 PPANQ9NQ55 473 aaKnown RBP17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 MINDY4BA8MYZ0 360 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 LRRC23Q53EV4 343 aaPredicted RBP17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 SPATS2Q86XZ4 545 aaKnown RBP17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 CNPY2Q9Y2B0 182 aa17.29■□□□□ 0.36
GTF3C4-201ENST00000372146 ZNF287Q9HBT7 754 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 MX1P20591 662 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 STXBP4Q6ZWJ1 553 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 TAOK1Q7L7X3 1001 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 NLRP5P59047 1200 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 HS1BP3Q53T59 392 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 TUBBP07437 444 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 IDEP14735 1019 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 TNNC1P63316 161 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 CLUL1Q15846 466 aa17.28■□□□□ 0.36
GTF3C4-201ENST00000372146 SF3A3Q12874 501 aaKnown RBP eCLIP17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 STAT6P42226 847 aa17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 AFMP43652 599 aa17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 BRD2P25440 801 aaKnown RBP17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 RASSF2P50749 326 aa17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 UBXN1Q04323 297 aa17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
GTF3C4-201ENST00000372146 GOLGA6BA6NDN3 693 aa17.27■□□□□ 0.35
GTF3C4-201ENST00000372146 CUL5Q93034 780 aa17.27■□□□□ 0.35
GTF3C4-201ENST00000372146 ZSCAN26Q16670 478 aa17.27■□□□□ 0.35
GTF3C4-201ENST00000372146 STAG1Q8WVM7 1258 aa17.27■□□□□ 0.35
GTF3C4-201ENST00000372146 BAG1Q99933 345 aaPredicted RBP17.27■□□□□ 0.35
GTF3C4-201ENST00000372146 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
GTF3C4-201ENST00000372146 TTF1Q15361 905 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms