RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PDE4AP27815 886 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 CXCL9Q07325 125 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 FLIIQ13045 1269 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 PRDM10Q9NQV6 1147 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
COL5A1-202ENST00000371820 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 ABT1Q9ULW3 272 aaKnown RBP13.03□□□□□ -0.32
COL5A1-202ENST00000371820 TAF1P21675 1872 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 TRPM7Q96QT4 1865 aa13.03□□□□□ -0.32
COL5A1-202ENST00000371820 CTCFP49711 727 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-202ENST00000371820 SLFN5Q08AF3 891 aa13.02□□□□□ -0.33
COL5A1-202ENST00000371820 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
COL5A1-202ENST00000371820 ZNF428Q96B54 188 aa13.02□□□□□ -0.33
COL5A1-202ENST00000371820 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
COL5A1-202ENST00000371820 GMPSP49915 693 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-202ENST00000371820 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
COL5A1-202ENST00000371820 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL5A1-202ENST00000371820 DNAAF4Q8WXU2 420 aa13.01□□□□□ -0.33
COL5A1-202ENST00000371820 CELF1Q92879 486 aaKnown RBP13.01□□□□□ -0.33
COL5A1-202ENST00000371820 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
COL5A1-202ENST00000371820 WDR33Q9C0J8 1336 aaKnown RBP13.01□□□□□ -0.33
COL5A1-202ENST00000371820 COL4A1P02462 1669 aa13.01□□□□□ -0.33
COL5A1-202ENST00000371820 TRAF5O00463 557 aa13□□□□□ -0.33
COL5A1-202ENST00000371820 IGKV5-2P06315 115 aa13□□□□□ -0.33
COL5A1-202ENST00000371820 CIAPIN1Q6FI81 312 aa13□□□□□ -0.33
COL5A1-202ENST00000371820 G2E3Q7L622 706 aa13□□□□□ -0.33
COL5A1-202ENST00000371820 LINS1Q8NG48 757 aa13□□□□□ -0.33
COL5A1-202ENST00000371820 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
COL5A1-202ENST00000371820 EYA3Q99504 573 aa13□□□□□ -0.33
COL5A1-202ENST00000371820 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 RAD17O75943 681 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 CTSWP56202 376 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 CWF19L2Q2TBE0 894 aaKnown RBP12.99□□□□□ -0.33
COL5A1-202ENST00000371820 CST9Q5W186 159 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 ANKRD18AQ8IVF6 992 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
COL5A1-202ENST00000371820 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
COL5A1-202ENST00000371820 TLL2Q9Y6L7 1015 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 MYH3P11055 1940 aa12.99□□□□□ -0.33
COL5A1-202ENST00000371820 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
COL5A1-202ENST00000371820 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
COL5A1-202ENST00000371820 LBX1P52954 281 aa12.98□□□□□ -0.33
COL5A1-202ENST00000371820 MAP2K1Q02750 393 aaPredicted RBP12.98□□□□□ -0.33
COL5A1-202ENST00000371820 TNIP1Q15025 636 aa12.98□□□□□ -0.33
COL5A1-202ENST00000371820 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
COL5A1-202ENST00000371820 CAPNS2Q96L46 248 aa12.98□□□□□ -0.33
COL5A1-202ENST00000371820 PGAP2Q9UHJ9 254 aa12.98□□□□□ -0.33
COL5A1-202ENST00000371820 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 H7C1W4 665 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 ECE1P42892 770 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 GCKRQ14397 625 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
COL5A1-202ENST00000371820 CRBNQ96SW2 442 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
COL5A1-202ENST00000371820 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
COL5A1-202ENST00000371820 G3V3G9 751 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-202ENST00000371820 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 CYP4F22Q6NT55 531 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-202ENST00000371820 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-202ENST00000371820 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-202ENST00000371820 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.33
COL5A1-202ENST00000371820 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 GGA1Q9UJY5 639 aa12.96□□□□□ -0.33
COL5A1-202ENST00000371820 XDHP47989 1333 aa12.95□□□□□ -0.34
COL5A1-202ENST00000371820 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
COL5A1-202ENST00000371820 CELF2O95319 508 aaKnown RBP12.95□□□□□ -0.34
COL5A1-202ENST00000371820 CT47B1P0C2W7 299 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-202ENST00000371820 IGHMBP2P38935 993 aaKnown RBP12.95□□□□□ -0.34
COL5A1-202ENST00000371820 GPSM2P81274 684 aa12.95□□□□□ -0.34
COL5A1-202ENST00000371820 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
COL5A1-202ENST00000371820 TBC1D16Q8TBP0 767 aa12.95□□□□□ -0.34
COL5A1-202ENST00000371820 CCDC85AQ96PX6 553 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-202ENST00000371820 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
COL5A1-202ENST00000371820 CNOT7Q9UIV1 285 aaKnown RBP12.95□□□□□ -0.34
COL5A1-202ENST00000371820 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
COL5A1-202ENST00000371820 UFL1O94874 794 aa12.94□□□□□ -0.34
COL5A1-202ENST00000371820 GRM1Q13255 1194 aa12.94□□□□□ -0.34
COL5A1-202ENST00000371820 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
COL5A1-202ENST00000371820 DPF2Q92785 391 aa12.94□□□□□ -0.34
COL5A1-202ENST00000371820 HHIPL1Q96JK4 782 aa12.94□□□□□ -0.34
COL5A1-202ENST00000371820 GPR101Q96P66 508 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-202ENST00000371820 DBNDD1Q9H9R9 158 aa12.94□□□□□ -0.34
COL5A1-202ENST00000371820 PTPRCP08575 1304 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 F6X3S4 739 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 H7C1D1 291 aa12.93□□□□□ -0.34
COL5A1-202ENST00000371820 PSMD14O00487 310 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms