RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RAB3GAP1Q15042 981 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 FILIP1LQ4L180 1135 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 CCDC186Q7Z3E2 898 aa10.61□□□□□ -0.71
SMARCA1-202ENST00000371122 PRAMEF22A3QJZ6 481 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 CHL1O00533 1208 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 RBSNQ9H1K0 784 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 HMGN5P82970 282 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 ANO6Q4KMQ2 910 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 LINS1Q8NG48 757 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 AKAP2Q9Y2D5 859 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 SFPQP23246 707 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 TXLNAP40222 546 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 MAP3K12Q12852 859 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 TMC6Q7Z403 805 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 STX8Q9UNK0 236 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
SMARCA1-202ENST00000371122 TNNT1P13805 278 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 AFMP43652 599 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 ZSCAN25Q6NSZ9 544 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 LUZP1Q86V48 1076 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 FMN2Q9NZ56 1722 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 CDC42BPGQ6DT37 1551 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 C6orf229H3BNL8 230 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 SLC3A2P08195 630 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 CREB3L3Q68CJ9 461 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 TSC1Q92574 1164 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 LMOD1P29536 600 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 GPIHBP1Q8IV16 184 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 UNC5CLQ8IV45 518 aa10.59□□□□□ -0.71
SMARCA1-202ENST00000371122 UBE2HP62256 183 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 PTPN14Q15678 1187 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ATP2B3Q16720 1220 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ZNF496Q96IT1 587 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 UIMC1Q96RL1 719 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 CENPHQ9H3R5 247 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 PRM3Q9NNZ6 103 aa10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 MAGEC2Q9UBF1 373 aaPredicted RBP10.58□□□□□ -0.71
SMARCA1-202ENST00000371122 METP08581 1390 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 SOS1Q07889 1333 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 SOGA3Q5TF21 947 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 LRSAM1Q6UWE0 723 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 FLT4P35916 1363 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 USP32Q8NFA0 1604 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 ZPR1O75312 459 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 F13A1P00488 732 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 CT47A1Q5JQC4 288 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 PDCL2Q8N4E4 241 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 DEF6Q9H4E7 631 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 GPS2Q13227 327 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 AXDND1Q5T1B0 1012 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 SUCLG2Q96I99 432 aa10.58□□□□□ -0.72
SMARCA1-202ENST00000371122 PRDM1O75626 825 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 CDKL5O76039 1030 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 IBSPP21815 317 aaPredicted RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 CCDC70Q6NSX1 233 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 SNX21Q969T3 373 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 IDEP14735 1019 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 PLIN2Q99541 437 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 USP44Q9H0E7 712 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 POLR3GO15318 223 aaPredicted RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 PROSER3Q2NL68 480 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 SPECC1Q5M775 1068 aa10.57□□□□□ -0.72
SMARCA1-202ENST00000371122 FAM170AA1A519 330 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 JAK2O60674 1132 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 STX17P56962 302 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 MCMDC2Q4G0Z9 681 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 GAS2L3Q86XJ1 694 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 ANO10Q9NW15 660 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 A0A1B0GVL5 298 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TAF5LO75529 589 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 NLRP5P59047 1200 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 AEBP2Q6ZN18 517 aaPredicted RBP10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 UBA5Q9GZZ9 404 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 SEPT11Q9NVA2 429 aaKnown RBP10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TSPY2A6NKD2 308 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 TAF3Q5VWG9 929 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
SMARCA1-202ENST00000371122 A0A087WWV3 80 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms