RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 HMMRO75330 724 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 CIAO1O76071 339 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 MPNDQ8N594 471 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 PSMD1Q99460 953 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 EYA2O00167 538 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 FKBP4Q02790 459 aaKnown RBP eCLIP19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 SUPT20HQ8NEM7 779 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 KLHDC4Q8TBB5 520 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 NSFL1CQ9UNZ2 370 aaKnown RBP19.32■□□□□ 0.68
PRPF38B-202ENST00000370022 XDHP47989 1333 aa19.31■□□□□ 0.68
PRPF38B-202ENST00000370022 MROH5Q6ZUA9 1318 aa19.31■□□□□ 0.68
PRPF38B-202ENST00000370022 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
PRPF38B-202ENST00000370022 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
PRPF38B-202ENST00000370022 RIPOR2Q9Y4F9 1068 aa19.31■□□□□ 0.68
PRPF38B-202ENST00000370022 GPSM2P81274 684 aa19.3■□□□□ 0.68
PRPF38B-202ENST00000370022 CHRNDQ07001 517 aa19.3■□□□□ 0.68
PRPF38B-202ENST00000370022 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
PRPF38B-202ENST00000370022 NFKBIEO00221 500 aa19.29■□□□□ 0.68
PRPF38B-202ENST00000370022 IL15P40933 162 aaPredicted RBP19.29■□□□□ 0.68
PRPF38B-202ENST00000370022 PUS3Q9BZE2 481 aaKnown RBP19.29■□□□□ 0.68
PRPF38B-202ENST00000370022 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
PRPF38B-202ENST00000370022 FER1L6Q2WGJ9 1857 aa19.29■□□□□ 0.68
PRPF38B-202ENST00000370022 SPEF2Q9C093 1822 aa19.29■□□□□ 0.68
PRPF38B-202ENST00000370022 ATP2B4P23634 1241 aa19.28■□□□□ 0.68
PRPF38B-202ENST00000370022 LRRC24Q50LG9 513 aa19.28■□□□□ 0.68
PRPF38B-202ENST00000370022 GGA1Q9UJY5 639 aa19.28■□□□□ 0.68
PRPF38B-202ENST00000370022 PA2G4Q9UQ80 394 aaKnown RBP19.28■□□□□ 0.68
PRPF38B-202ENST00000370022 LEMD3Q9Y2U8 911 aa19.28■□□□□ 0.68
PRPF38B-202ENST00000370022 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
PRPF38B-202ENST00000370022 SIRT2Q8IXJ6 389 aa19.27■□□□□ 0.68
PRPF38B-202ENST00000370022 SIL1Q9H173 461 aa19.27■□□□□ 0.68
PRPF38B-202ENST00000370022 NOP58Q9Y2X3 529 aaKnown RBP19.27■□□□□ 0.68
PRPF38B-202ENST00000370022 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.68
PRPF38B-202ENST00000370022 IRX6P78412 446 aaPredicted RBP19.27■□□□□ 0.67
PRPF38B-202ENST00000370022 G3BP1Q13283 466 aaKnown RBP eCLIP19.27■□□□□ 0.67
PRPF38B-202ENST00000370022 LTBP1Q14766 1721 aa19.27■□□□□ 0.67
PRPF38B-202ENST00000370022 METTL24Q5JXM2 366 aa19.27■□□□□ 0.67
PRPF38B-202ENST00000370022 ATG9AQ7Z3C6 839 aa19.27■□□□□ 0.67
PRPF38B-202ENST00000370022 TBC1D16Q8TBP0 767 aa19.27■□□□□ 0.67
PRPF38B-202ENST00000370022 EYA3Q99504 573 aa19.27■□□□□ 0.67
PRPF38B-202ENST00000370022 UTRNP46939 3433 aa19.26■□□□□ 0.67
PRPF38B-202ENST00000370022 SURF6O75683 361 aaKnown RBP19.26■□□□□ 0.67
PRPF38B-202ENST00000370022 HSP90AB4PQ58FF6 505 aa19.26■□□□□ 0.67
PRPF38B-202ENST00000370022 PCDHB15Q9Y5E8 787 aa19.26■□□□□ 0.67
PRPF38B-202ENST00000370022 DUOX1Q9NRD9 1551 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 UFL1O94874 794 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 PDE8BO95263 885 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 LMNB1P20700 586 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 RASSF7Q02833 373 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 POLLQ9UGP5 575 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 ZNF804BA4D1E1 1349 aa19.25■□□□□ 0.67
PRPF38B-202ENST00000370022 NEFLP07196 543 aa19.24■□□□□ 0.67
PRPF38B-202ENST00000370022 YY1P25490 414 aa19.24■□□□□ 0.67
PRPF38B-202ENST00000370022 KCNJ4P48050 445 aa19.24■□□□□ 0.67
PRPF38B-202ENST00000370022 VGLL2Q8N8G2 317 aa19.24■□□□□ 0.67
PRPF38B-202ENST00000370022 CEP126Q9P2H0 1117 aa19.24■□□□□ 0.67
PRPF38B-202ENST00000370022 TAF5LO75529 589 aa19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 UBE4AQ14139 1066 aa19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 WASHC4Q2M389 1173 aa19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 ERC1Q8IUD2 1116 aa19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 HELBQ8NG08 1087 aaPredicted RBP19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 ZNF277Q9NRM2 450 aaPredicted RBP19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 KIAA2012Q0VF49 1180 aa19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 ZC3H12CQ9C0D7 883 aaKnown RBP19.23■□□□□ 0.67
PRPF38B-202ENST00000370022 MED23Q9ULK4 1368 aa19.22■□□□□ 0.67
PRPF38B-202ENST00000370022 PPIP5K2O43314 1243 aa19.22■□□□□ 0.67
PRPF38B-202ENST00000370022 HDAC1Q13547 482 aaPredicted RBP19.22■□□□□ 0.67
PRPF38B-202ENST00000370022 PUM3Q15397 648 aaKnown RBP19.22■□□□□ 0.67
PRPF38B-202ENST00000370022 A0A1B0GUL6 1792 aa19.21■□□□□ 0.67
PRPF38B-202ENST00000370022 RAB11FIP3O75154 756 aa19.21■□□□□ 0.67
PRPF38B-202ENST00000370022 C15orf52Q6ZUT6 534 aaKnown RBP19.21■□□□□ 0.67
PRPF38B-202ENST00000370022 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
PRPF38B-202ENST00000370022 LARGE2Q8N3Y3 721 aa19.2■□□□□ 0.66
PRPF38B-202ENST00000370022 JDP2Q8WYK2 163 aa19.2■□□□□ 0.66
PRPF38B-202ENST00000370022 DCTPP1Q9H773 170 aa19.2■□□□□ 0.66
PRPF38B-202ENST00000370022 EXOC6BQ9Y2D4 811 aa19.2■□□□□ 0.66
PRPF38B-202ENST00000370022 ZC3H4Q9UPT8 1303 aaKnown RBP19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 SASH1O94885 1247 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 FGFR2P21802 821 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 PRELPP51888 382 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 TFCP2Q12800 502 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 AOC3Q16853 763 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 LPIN2Q92539 896 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 RWDD1Q9H446 243 aaPredicted RBP19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 GPR108Q9NPR9 543 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 RNF181Q9P0P0 153 aa19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 IFIT1P09914 478 aaKnown RBP19.19■□□□□ 0.66
PRPF38B-202ENST00000370022 RIMBP2O15034 1052 aa19.18■□□□□ 0.66
PRPF38B-202ENST00000370022 SLC5A1P13866 664 aa19.18■□□□□ 0.66
PRPF38B-202ENST00000370022 ATP2B3Q16720 1220 aa19.18■□□□□ 0.66
PRPF38B-202ENST00000370022 NIM1KQ8IY84 436 aa19.18■□□□□ 0.66
PRPF38B-202ENST00000370022 KIF1BPQ96EK5 621 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms