RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 AOC3Q16853 763 aa23.28■■□□□ 1.32
CHTOP-202ENST00000368687 WASHC4Q2M389 1173 aa23.28■■□□□ 1.32
CHTOP-202ENST00000368687 LMBR1LQ6UX01 489 aa23.28■■□□□ 1.32
CHTOP-202ENST00000368687 ATF7IPQ6VMQ6 1270 aa23.28■■□□□ 1.32
CHTOP-202ENST00000368687 GPC2Q8N158 579 aa23.28■■□□□ 1.32
CHTOP-202ENST00000368687 RBM46Q8TBY0 533 aaKnown RBP23.28■■□□□ 1.32
CHTOP-202ENST00000368687 POTECB2RU33 542 aa23.27■■□□□ 1.32
CHTOP-202ENST00000368687 TBC1D16Q8TBP0 767 aa23.27■■□□□ 1.32
CHTOP-202ENST00000368687 L3MBTL3Q96JM7 780 aaPredicted RBP23.27■■□□□ 1.32
CHTOP-202ENST00000368687 ANKRD2Q9GZV1 360 aa23.27■■□□□ 1.32
CHTOP-202ENST00000368687 USP44Q9H0E7 712 aa23.27■■□□□ 1.32
CHTOP-202ENST00000368687 ZNRF3Q9ULT6 936 aa23.27■■□□□ 1.32
CHTOP-202ENST00000368687 BCAR3O75815 825 aa23.26■■□□□ 1.31
CHTOP-202ENST00000368687 UFL1O94874 794 aa23.26■■□□□ 1.31
CHTOP-202ENST00000368687 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
CHTOP-202ENST00000368687 TAF7LQ5H9L4 462 aa23.26■■□□□ 1.31
CHTOP-202ENST00000368687 ZKSCAN2Q63HK3 967 aa23.26■■□□□ 1.31
CHTOP-202ENST00000368687 INTS3Q68E01 1043 aaKnown RBP23.26■■□□□ 1.31
CHTOP-202ENST00000368687 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
CHTOP-202ENST00000368687 FRAT1Q92837 279 aaPredicted RBP23.25■■□□□ 1.31
CHTOP-202ENST00000368687 SUCLG2Q96I99 432 aa23.25■■□□□ 1.31
CHTOP-202ENST00000368687 ZC3H12CQ9C0D7 883 aaKnown RBP23.25■■□□□ 1.31
CHTOP-202ENST00000368687 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
CHTOP-202ENST00000368687 MINPP1Q9UNW1 487 aa23.25■■□□□ 1.31
CHTOP-202ENST00000368687 COL4A5P29400 1685 aa23.25■■□□□ 1.31
CHTOP-202ENST00000368687 DDNO94850 711 aaPredicted RBP23.24■■□□□ 1.31
CHTOP-202ENST00000368687 UBTFL1P0CB47 393 aaPredicted RBP23.24■■□□□ 1.31
CHTOP-202ENST00000368687 TRIM27P14373 513 aa23.24■■□□□ 1.31
CHTOP-202ENST00000368687 ZNF541Q9H0D2 1346 aa23.24■■□□□ 1.31
CHTOP-202ENST00000368687 EPHA10Q5JZY3 1008 aa23.23■■□□□ 1.31
CHTOP-202ENST00000368687 BICC1Q9H694 974 aaKnown RBP23.23■■□□□ 1.31
CHTOP-202ENST00000368687 LEMD3Q9Y2U8 911 aa23.23■■□□□ 1.31
CHTOP-202ENST00000368687 GNAI3P08754 354 aa23.22■■□□□ 1.31
CHTOP-202ENST00000368687 TNIP1Q15025 636 aa23.22■■□□□ 1.31
CHTOP-202ENST00000368687 KAZALD1Q96I82 304 aa23.22■■□□□ 1.31
CHTOP-202ENST00000368687 G3V3G9 751 aa23.21■■□□□ 1.31
CHTOP-202ENST00000368687 FSTL1Q12841 308 aa23.21■■□□□ 1.31
CHTOP-202ENST00000368687 DCAF8Q5TAQ9 597 aa23.21■■□□□ 1.31
CHTOP-202ENST00000368687 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
CHTOP-202ENST00000368687 LDHAL6AQ6ZMR3 332 aa23.2■■□□□ 1.3
CHTOP-202ENST00000368687 FTSJ3Q8IY81 847 aaKnown RBP23.2■■□□□ 1.3
CHTOP-202ENST00000368687 MS4A1P11836 297 aa23.19■■□□□ 1.3
CHTOP-202ENST00000368687 LMOD1P29536 600 aaPredicted RBP23.19■■□□□ 1.3
CHTOP-202ENST00000368687 CNNM1Q9NRU3 951 aa23.19■■□□□ 1.3
CHTOP-202ENST00000368687 KCNJ4P48050 445 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 CHRNDQ07001 517 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 CIAPIN1Q6FI81 312 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 ANKRD44Q8N8A2 993 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 SMC1BQ8NDV3 1235 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 HACL1Q9UJ83 578 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 GJA3Q9Y6H8 435 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 A0A1B0GUL6 1792 aa23.18■■□□□ 1.3
CHTOP-202ENST00000368687 ZNF804BA4D1E1 1349 aa23.17■■□□□ 1.3
CHTOP-202ENST00000368687 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
CHTOP-202ENST00000368687 APLP1P51693 650 aa23.17■■□□□ 1.3
CHTOP-202ENST00000368687 ECE2O60344 883 aa23.16■■□□□ 1.3
CHTOP-202ENST00000368687 CXCL9Q07325 125 aa23.16■■□□□ 1.3
CHTOP-202ENST00000368687 PNMA8AQ86V59 439 aaPredicted RBP23.16■■□□□ 1.3
CHTOP-202ENST00000368687 PSME4Q14997 1843 aa23.15■■□□□ 1.3
CHTOP-202ENST00000368687 MROH5Q6ZUA9 1318 aa23.15■■□□□ 1.3
CHTOP-202ENST00000368687 PODNQ7Z5L7 613 aa23.15■■□□□ 1.3
CHTOP-202ENST00000368687 DZIP1LQ8IYY4 767 aaKnown RBP23.15■■□□□ 1.3
CHTOP-202ENST00000368687 DBNDD1Q9H9R9 158 aa23.15■■□□□ 1.3
CHTOP-202ENST00000368687 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
CHTOP-202ENST00000368687 MEIS3Q99687 375 aa23.14■■□□□ 1.29
CHTOP-202ENST00000368687 TAF1DQ9H5J8 278 aaPredicted RBP23.14■■□□□ 1.29
CHTOP-202ENST00000368687 FBXO3Q9UK99 471 aa23.14■■□□□ 1.29
CHTOP-202ENST00000368687 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.29
CHTOP-202ENST00000368687 YDJCA8MPS7 323 aa23.13■■□□□ 1.29
CHTOP-202ENST00000368687 POTEIP0CG38 1075 aa23.13■■□□□ 1.29
CHTOP-202ENST00000368687 POTEJP0CG39 1038 aa23.13■■□□□ 1.29
CHTOP-202ENST00000368687 RPS12P25398 132 aaKnown RBP23.13■■□□□ 1.29
CHTOP-202ENST00000368687 HTRA3P83110 453 aa23.13■■□□□ 1.29
CHTOP-202ENST00000368687 C15orf52Q6ZUT6 534 aaKnown RBP23.13■■□□□ 1.29
CHTOP-202ENST00000368687 COA1Q9GZY4 146 aa23.13■■□□□ 1.29
CHTOP-202ENST00000368687 ZNF609O15014 1411 aa23.12■■□□□ 1.29
CHTOP-202ENST00000368687 RAD17O75943 681 aa23.12■■□□□ 1.29
CHTOP-202ENST00000368687 EPHX2P34913 555 aa23.12■■□□□ 1.29
CHTOP-202ENST00000368687 DOK7Q18PE1 504 aa23.12■■□□□ 1.29
CHTOP-202ENST00000368687 ZNF594Q96JF6 807 aaPredicted RBP23.12■■□□□ 1.29
CHTOP-202ENST00000368687 LRRFIP2Q9Y608 721 aaKnown RBP23.12■■□□□ 1.29
CHTOP-202ENST00000368687 GNAI2P04899 355 aa23.11■■□□□ 1.29
CHTOP-202ENST00000368687 SCNN1DP51172 638 aa23.11■■□□□ 1.29
CHTOP-202ENST00000368687 LDHDQ86WU2 507 aa23.11■■□□□ 1.29
CHTOP-202ENST00000368687 TMEM57Q8N5G2 664 aa23.11■■□□□ 1.29
CHTOP-202ENST00000368687 DPF2Q92785 391 aa23.11■■□□□ 1.29
CHTOP-202ENST00000368687 GPR101Q96P66 508 aaPredicted RBP23.11■■□□□ 1.29
CHTOP-202ENST00000368687 GPRC5DQ9NZD1 345 aa23.11■■□□□ 1.29
CHTOP-202ENST00000368687 UBE4AQ14139 1066 aa23.1■■□□□ 1.29
CHTOP-202ENST00000368687 DNAJC5GQ8N7S2 189 aa23.1■■□□□ 1.29
CHTOP-202ENST00000368687 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.1■■□□□ 1.29
CHTOP-202ENST00000368687 RIPOR2Q9Y4F9 1068 aa23.1■■□□□ 1.29
CHTOP-202ENST00000368687 SCN9AQ15858 1988 aa23.1■■□□□ 1.29
CHTOP-202ENST00000368687 PSMD14O00487 310 aa23.09■■□□□ 1.29
CHTOP-202ENST00000368687 MTX1Q13505 466 aa23.09■■□□□ 1.29
CHTOP-202ENST00000368687 USP50Q70EL3 339 aaPredicted RBP23.09■■□□□ 1.29
CHTOP-202ENST00000368687 CIAO1O76071 339 aa23.08■■□□□ 1.29
CHTOP-202ENST00000368687 VIL1P09327 827 aaKnown RBP23.08■■□□□ 1.29
CHTOP-202ENST00000368687 GMPSP49915 693 aaPredicted RBP23.08■■□□□ 1.29
CHTOP-202ENST00000368687 ZNF804AQ7Z570 1209 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms