RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 SLIT1O75093 1534 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 TFCP2Q12800 502 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 KRT28Q7Z3Y7 464 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 GTF3C6Q969F1 213 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 USP27XA6NNY8 438 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 NEXNQ0ZGT2 675 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 CCDC144BQ3MJ40 725 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 CCDC144CPQ8IYA2 1237 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 MAP4K1Q92918 833 aa23.05■■□□□ 1.28
TRIM58-201ENST00000366481 RGPD2P0DJD1 1756 aa23.05■■□□□ 1.28
TRIM58-201ENST00000366481 NEURL1BA8MQ27 555 aa23.04■■□□□ 1.28
TRIM58-201ENST00000366481 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
TRIM58-201ENST00000366481 FBXO38Q6PIJ6 1188 aa23.04■■□□□ 1.28
TRIM58-201ENST00000366481 IL17RAQ96F46 866 aa23.04■■□□□ 1.28
TRIM58-201ENST00000366481 CHMP4AQ9BY43 222 aa23.04■■□□□ 1.28
TRIM58-201ENST00000366481 CALCOCO1Q9P1Z2 691 aa23.04■■□□□ 1.28
TRIM58-201ENST00000366481 DBNLQ9UJU6 430 aaKnown RBP23.04■■□□□ 1.28
TRIM58-201ENST00000366481 DBNDD2Q9BQY9 259 aa23.03■■□□□ 1.28
TRIM58-201ENST00000366481 NOL10Q9BSC4 688 aaKnown RBP23.03■■□□□ 1.28
TRIM58-201ENST00000366481 A0A0G2JS52 829 aa23.03■■□□□ 1.28
TRIM58-201ENST00000366481 GCKRQ14397 625 aa23.03■■□□□ 1.28
TRIM58-201ENST00000366481 SYCP1Q15431 976 aa23.03■■□□□ 1.28
TRIM58-201ENST00000366481 NEUROD6Q96NK8 337 aa23.03■■□□□ 1.28
TRIM58-201ENST00000366481 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
TRIM58-201ENST00000366481 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
TRIM58-201ENST00000366481 ZSCAN31Q96LW9 406 aaPredicted RBP23.03■■□□□ 1.28
TRIM58-201ENST00000366481 TUBGCP6Q96RT7 1819 aa23.02■■□□□ 1.28
TRIM58-201ENST00000366481 POLR3GO15318 223 aaPredicted RBP23.01■■□□□ 1.27
TRIM58-201ENST00000366481 A0A087WWV3 80 aa23.01■■□□□ 1.27
TRIM58-201ENST00000366481 A0A0G2JLW4 131 aa23.01■■□□□ 1.27
TRIM58-201ENST00000366481 NR1I2O75469 434 aa23.01■■□□□ 1.27
TRIM58-201ENST00000366481 CHST3Q7LGC8 479 aa23.01■■□□□ 1.27
TRIM58-201ENST00000366481 CCDC85AQ96PX6 553 aaPredicted RBP23.01■■□□□ 1.27
TRIM58-201ENST00000366481 SH2B1Q9NRF2 756 aaPredicted RBP23.01■■□□□ 1.27
TRIM58-201ENST00000366481 TNNT3P45378 269 aaPredicted RBP23.01■■□□□ 1.27
TRIM58-201ENST00000366481 TOB2Q14106 344 aaPredicted RBP23.01■■□□□ 1.27
TRIM58-201ENST00000366481 ANKRD13DQ6ZTN6 518 aa23.01■■□□□ 1.27
TRIM58-201ENST00000366481 SCAND2PQ9GZW5 306 aaPredicted RBP23.01■■□□□ 1.27
TRIM58-201ENST00000366481 DDX19AQ9NUU7 478 aaKnown RBP23.01■■□□□ 1.27
TRIM58-201ENST00000366481 LTN1O94822 1766 aa23■■□□□ 1.27
TRIM58-201ENST00000366481 A0A087WZG4 1122 aa23■■□□□ 1.27
TRIM58-201ENST00000366481 PDCP20941 246 aa23■■□□□ 1.27
TRIM58-201ENST00000366481 MARF1Q9Y4F3 1742 aaKnown RBP22.99■■□□□ 1.27
TRIM58-201ENST00000366481 CCDC69A6NI79 296 aa22.99■■□□□ 1.27
TRIM58-201ENST00000366481 LRRC8AQ8IWT6 810 aa22.99■■□□□ 1.27
TRIM58-201ENST00000366481 H3BQV1 296 aa22.99■■□□□ 1.27
TRIM58-201ENST00000366481 SLU7O95391 586 aaKnown RBP22.99■■□□□ 1.27
TRIM58-201ENST00000366481 IFFO2Q5TF58 517 aa22.99■■□□□ 1.27
TRIM58-201ENST00000366481 FTOQ9C0B1 505 aaKnown RBP eCLIP22.99■■□□□ 1.27
TRIM58-201ENST00000366481 TTC5Q8N0Z6 440 aa22.99■■□□□ 1.27
TRIM58-201ENST00000366481 RPS6KB1P23443 525 aa22.98■■□□□ 1.27
TRIM58-201ENST00000366481 HOMER1Q86YM7 354 aa22.98■■□□□ 1.27
TRIM58-201ENST00000366481 TIMM10P62072 90 aa22.98■■□□□ 1.27
TRIM58-201ENST00000366481 GUCY1B3Q02153 619 aa22.98■■□□□ 1.27
TRIM58-201ENST00000366481 ERCC6LQ2NKX8 1250 aa22.98■■□□□ 1.27
TRIM58-201ENST00000366481 PLA2G4DQ86XP0 818 aa22.98■■□□□ 1.27
TRIM58-201ENST00000366481 COL15A1P39059 1388 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 EPB41L2O43491 1005 aaKnown RBP22.97■■□□□ 1.27
TRIM58-201ENST00000366481 TAF5LO75529 589 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 PSMA5P28066 241 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 RNF20Q5VTR2 975 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 ERO1AQ96HE7 468 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 SLC52A2Q9HAB3 445 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 NFAT5O94916 1531 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.97■■□□□ 1.27
TRIM58-201ENST00000366481 TRIM34Q9BYJ4 488 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 TM6SF1Q9BZW5 370 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 ATF3P18847 181 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 ZRSR1Q15695 479 aaKnown RBP22.97■■□□□ 1.27
TRIM58-201ENST00000366481 BRF1Q92994 677 aa22.97■■□□□ 1.27
TRIM58-201ENST00000366481 ERBB3P21860 1342 aa22.96■■□□□ 1.27
TRIM58-201ENST00000366481 CCT2P78371 535 aaKnown RBP22.96■■□□□ 1.27
TRIM58-201ENST00000366481 PTPN12Q05209 780 aaKnown RBP22.96■■□□□ 1.27
TRIM58-201ENST00000366481 LMBR1LQ6UX01 489 aa22.96■■□□□ 1.27
TRIM58-201ENST00000366481 Q6ZUG5 572 aa22.96■■□□□ 1.27
TRIM58-201ENST00000366481 NPHP3Q7Z494 1330 aa22.96■■□□□ 1.27
TRIM58-201ENST00000366481 TNNI3KQ59H18 835 aa22.96■■□□□ 1.27
TRIM58-201ENST00000366481 ZNF594Q96JF6 807 aaPredicted RBP22.96■■□□□ 1.27
TRIM58-201ENST00000366481 CLSTN2Q9H4D0 955 aa22.96■■□□□ 1.27
TRIM58-201ENST00000366481 FPGT-TNNI3KV9GXZ4 949 aa22.96■■□□□ 1.27
TRIM58-201ENST00000366481 BMS1Q14692 1282 aaKnown RBP22.95■■□□□ 1.27
TRIM58-201ENST00000366481 LEO1Q8WVC0 666 aaPredicted RBP22.95■■□□□ 1.27
TRIM58-201ENST00000366481 TDRD7Q8NHU6 1098 aaKnown RBP22.95■■□□□ 1.26
TRIM58-201ENST00000366481 ERCC4Q92889 916 aaPredicted RBP22.95■■□□□ 1.26
TRIM58-201ENST00000366481 FMNL2Q96PY5 1086 aa22.95■■□□□ 1.26
TRIM58-201ENST00000366481 METTL22Q9BUU2 404 aaPredicted RBP22.95■■□□□ 1.26
TRIM58-201ENST00000366481 GOLIM4O00461 696 aa22.95■■□□□ 1.26
TRIM58-201ENST00000366481 CACNA1FO60840 1977 aa22.94■■□□□ 1.26
TRIM58-201ENST00000366481 RBM6P78332 1123 aaKnown RBP22.94■■□□□ 1.26
TRIM58-201ENST00000366481 RAB11FIP4Q86YS3 637 aa22.94■■□□□ 1.26
TRIM58-201ENST00000366481 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
TRIM58-201ENST00000366481 NCOA5Q9HCD5 579 aaKnown RBP22.94■■□□□ 1.26
TRIM58-201ENST00000366481 CYP21A2P08686 494 aa22.93■■□□□ 1.26
TRIM58-201ENST00000366481 PHKG2P15735 406 aa22.93■■□□□ 1.26
TRIM58-201ENST00000366481 SNW1Q13573 536 aaKnown RBP22.93■■□□□ 1.26
TRIM58-201ENST00000366481 HSP90AB3PQ58FF7 597 aa22.93■■□□□ 1.26
TRIM58-201ENST00000366481 NEK1Q96PY6 1258 aa22.93■■□□□ 1.26
TRIM58-201ENST00000366481 SYT10Q6XYQ8 523 aa22.93■■□□□ 1.26
TRIM58-201ENST00000366481 ZBTB3Q9H5J0 574 aa22.93■■□□□ 1.26
TRIM58-201ENST00000366481 HDAC5Q9UQL6 1122 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms