RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 PATL2C9JE40 543 aaKnown RBP5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 EIF2AK2P19525 551 aaKnown RBP5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 SIK1P57059 783 aa5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 EHHADHQ08426 723 aa5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 KCTD17Q8N5Z5 321 aa5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 LPIN3Q9BQK8 851 aa5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 JPH1Q9HDC5 661 aaPredicted RBP5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 KANSL3Q9P2N6 904 aa5.97□□□□□ -1.45
RNU4-48P-201ENST00000365559 RGS9O75916 674 aaPredicted RBP5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 IGHA2P01877 340 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 CES1P23141 567 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 IRS1P35568 1242 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 GSK3AP49840 483 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 HYAL2Q12891 473 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 ELMSAN1Q6PJG2 1045 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 TRIM11Q96F44 468 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 FAM129BQ96TA1 746 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 SMG9Q9H0W8 520 aaKnown RBP5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 SUV39H2Q9H5I1 410 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 PRDM6Q9NQX0 595 aa5.96□□□□□ -1.46
RNU4-48P-201ENST00000365559 PHF20L1A8MW92 1017 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 GNB5O14775 395 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 EREGO14944 169 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 GPR182O15218 404 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 LILRB5O75023 590 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 PHACTR2O75167 634 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 KIF4AO95239 1232 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 NID1P14543 1247 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 ATP11AP98196 1134 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 HOMEZQ8IX15 550 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 TMC1Q8TDI8 760 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 SNX29Q8TEQ0 813 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 PLD4Q96BZ4 506 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 CITED4Q96RK1 184 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 FRRS1LQ9P0K9 344 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 DCTN4Q9UJW0 460 aa5.95□□□□□ -1.46
RNU4-48P-201ENST00000365559 GHRHP01286 108 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 ACPPP15309 386 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 COL8A1P27658 744 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 MAPK1P28482 360 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 KCNMA1Q12791 1236 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 GRIK5Q16478 980 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 TMC7Q7Z402 723 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 NCAPG2Q86XI2 1143 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 PLVAPQ9BX97 442 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 RBCK1Q9BYM8 510 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 SALL4Q9UJQ4 1053 aa5.94□□□□□ -1.46
RNU4-48P-201ENST00000365559 RNF225M0QZC1 329 aaPredicted RBP5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 RASSF7Q02833 373 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 PDE3BQ13370 1112 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 ORC1Q13415 861 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 CEP120Q8N960 986 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 TTC9Q92623 222 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 NIF3L1Q9GZT8 377 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 RASSF4Q9H2L5 321 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 ZFYVE28Q9HCC9 887 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 TRIM33Q9UPN9 1127 aa5.93□□□□□ -1.46
RNU4-48P-201ENST00000365559 TRPA1O75762 1119 aa5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 POLR3DP05423 398 aaPredicted RBP5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 USPL1Q5W0Q7 1092 aa5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 ADAMTSL4Q6UY14 1074 aa5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 SND1Q7KZF4 910 aaKnown RBP eCLIP5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 PMEPA1Q969W9 287 aa5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 SPACA7Q96KW9 195 aa5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 RBSNQ9H1K0 784 aa5.92□□□□□ -1.46
RNU4-48P-201ENST00000365559 PIK3R2O00459 728 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 CEP135Q66GS9 1140 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 GDF6Q6KF10 455 aaPredicted RBP5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 ILDR2Q71H61 639 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 DMRTC2Q8IXT2 367 aaPredicted RBP5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 DMRTB1Q96MA1 342 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 HHIPQ96QV1 700 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 PBX4Q9BYU1 374 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 LATS2Q9NRM7 1088 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 AMOTL2Q9Y2J4 779 aa5.91□□□□□ -1.46
RNU4-48P-201ENST00000365559 FAM229AH3BQW9 127 aa5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 NFKBIEO00221 500 aa5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 BAG6P46379 1132 aa5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 PEAR1Q5VY43 1037 aaPredicted RBP5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 MSL1Q68DK7 614 aa5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 ALKBH8Q96BT7 664 aaKnown RBP5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 DCAF5Q96JK2 942 aa5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 GZF1Q9H116 711 aaPredicted RBP5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 DZANK1Q9NVP4 752 aa5.9□□□□□ -1.46
RNU4-48P-201ENST00000365559 EIF1AYO14602 144 aaKnown RBP5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 TREHO43280 583 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 SMNDC1O75940 238 aaKnown RBP eCLIP5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 GDF11O95390 407 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 EDN3P14138 238 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 DSC3Q14574 896 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 TRAPPC3LQ5T215 181 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 WFDC8Q8IUA0 241 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 IL22RA1Q8N6P7 574 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 ASB16Q96NS5 453 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 POP1Q99575 1024 aaKnown RBP5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 OSMRQ99650 979 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 ZKSCAN3Q9BRR0 538 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 LACRTQ9GZZ8 138 aa5.89□□□□□ -1.47
RNU4-48P-201ENST00000365559 NOP53Q9NZM5 478 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms