RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
RNU4-39P-201ENST00000362455 SLC30A3Q99726 388 aa8.93□□□□□ -0.98
RNU4-39P-201ENST00000362455 ATXN7L1Q9ULK2 861 aaPredicted RBP8.93□□□□□ -0.98
RNU4-39P-201ENST00000362455 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.93□□□□□ -0.98
RNU4-39P-201ENST00000362455 PEG3Q9GZU2 1588 aa8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 BAZ1AQ9NRL2 1556 aaPredicted RBP8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 PHF20L1A8MW92 1017 aa8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 ERCC5P28715 1186 aaPredicted RBP8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 RAB44Q7Z6P3 723 aaPredicted RBP8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 BCO2Q9BYV7 579 aa8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 LATS2Q9NRM7 1088 aa8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 METTL5Q9NRN9 209 aaKnown RBP8.92□□□□□ -0.98
RNU4-39P-201ENST00000362455 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
RNU4-39P-201ENST00000362455 IGSF3O75054 1194 aa8.91□□□□□ -0.98
RNU4-39P-201ENST00000362455 NXPE4Q6UWF7 544 aa8.91□□□□□ -0.98
RNU4-39P-201ENST00000362455 METTL16Q86W50 562 aaKnown RBP8.91□□□□□ -0.98
RNU4-39P-201ENST00000362455 BHMTQ93088 406 aa8.91□□□□□ -0.98
RNU4-39P-201ENST00000362455 SUV39H2Q9H5I1 410 aa8.91□□□□□ -0.98
RNU4-39P-201ENST00000362455 PDS5BQ9NTI5 1447 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 PSAPP07602 524 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 EDN3P14138 238 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 FGFR3P22607 806 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 ZNF76P36508 570 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 GRM2Q14416 872 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 PEAR1Q5VY43 1037 aaPredicted RBP8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 RNF34Q969K3 372 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 EFCC1Q9HA90 598 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 TLR7Q9NYK1 1049 aaKnown RBP8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 FAM8A1Q9UBU6 413 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 SALL4Q9UJQ4 1053 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 PHF24Q9UPV7 400 aa8.9□□□□□ -0.98
RNU4-39P-201ENST00000362455 A0A1W2PP55 124 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 MAP3K6O95382 1288 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 USP17L7P0C7H9 530 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 SOX18P35713 384 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 KIAA0319Q5VV43 1072 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 NT5DC4Q86YG4 428 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 C8orf37Q96NL8 207 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 SRCIN1Q9C0H9 1055 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 LAMC3Q9Y6N6 1575 aa8.89□□□□□ -0.99
RNU4-39P-201ENST00000362455 CDC14CA4D256 554 aa8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 GPR25O00155 361 aa8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 ZC3H6P61129 1189 aaKnown RBP8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 RAD51AP2Q09MP3 1159 aa8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 COL13A1Q5TAT6 717 aaPredicted RBP8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 DHX32Q7L7V1 743 aaKnown RBP8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 TRERF1Q96PN7 1200 aa8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 EHD4Q9H223 541 aa8.88□□□□□ -0.99
RNU4-39P-201ENST00000362455 KIF4AO95239 1232 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 CTBSQ01459 385 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 PLAURQ03405 335 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 HYAL2Q12891 473 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 MEI1Q5TIA1 1274 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 NCAPG2Q86XI2 1143 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 VWA5B2Q8N398 1253 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 GLIS3Q8NEA6 775 aa8.87□□□□□ -0.99
RNU4-39P-201ENST00000362455 HOXD8P13378 290 aaPredicted RBP8.86□□□□□ -0.99
RNU4-39P-201ENST00000362455 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
RNU4-39P-201ENST00000362455 NSUN5Q96P11 429 aaKnown RBP8.86□□□□□ -0.99
RNU4-39P-201ENST00000362455 NXF1Q9UBU9 619 aaKnown RBP8.86□□□□□ -0.99
RNU4-39P-201ENST00000362455 TRAK1Q9UPV9 953 aa8.86□□□□□ -0.99
RNU4-39P-201ENST00000362455 USP31Q70CQ4 1352 aa8.86□□□□□ -0.99
RNU4-39P-201ENST00000362455 ACPPP15309 386 aa8.85□□□□□ -0.99
RNU4-39P-201ENST00000362455 GSTT1P30711 240 aa8.85□□□□□ -0.99
RNU4-39P-201ENST00000362455 TAF1CQ15572 869 aaPredicted RBP8.85□□□□□ -0.99
RNU4-39P-201ENST00000362455 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
RNU4-39P-201ENST00000362455 CNTNAP3BQ96NU0 1288 aa8.85□□□□□ -0.99
RNU4-39P-201ENST00000362455 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
RNU4-39P-201ENST00000362455 CNTNAP3Q9BZ76 1288 aa8.85□□□□□ -0.99
RNU4-39P-201ENST00000362455 NRLP54845 237 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 NAALADL2Q58DX5 795 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 PRPF40BQ6NWY9 871 aaKnown RBP8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 SV2AQ7L0J3 742 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 OSMRQ99650 979 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 LIN7BQ9HAP6 207 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 PPP4R2Q9NY27 417 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 USP35Q9P2H5 1018 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 PRR12Q9ULL5 1215 aa8.84□□□□□ -0.99
RNU4-39P-201ENST00000362455 MRC2Q9UBG0 1479 aa8.83□□□□□ -1
RNU4-39P-201ENST00000362455 ST13P50502 369 aaKnown RBP8.83□□□□□ -1
RNU4-39P-201ENST00000362455 CEP120Q8N960 986 aa8.83□□□□□ -1
RNU4-39P-201ENST00000362455 C3orf58Q8NDZ4 430 aa8.83□□□□□ -1
RNU4-39P-201ENST00000362455 NANOS1Q8WY41 292 aaKnown RBP8.83□□□□□ -1
RNU4-39P-201ENST00000362455 TCF12Q99081 682 aa8.83□□□□□ -1
RNU4-39P-201ENST00000362455 TGIF2Q9GZN2 237 aa8.83□□□□□ -1
RNU4-39P-201ENST00000362455 ABCB6Q9NP58 842 aa8.83□□□□□ -1
RNU4-39P-201ENST00000362455 ZBTB42B2RXF5 422 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 C2CD2LO14523 706 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 TRPA1O75762 1119 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 FCGRTP55899 365 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 GPLD1P80108 840 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 MLLT1Q03111 559 aaPredicted RBP8.82□□□□□ -1
RNU4-39P-201ENST00000362455 HS2ST1Q7LGA3 356 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 SYT9Q86SS6 491 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 TRPM4Q8TD43 1214 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 OXCT2Q9BYC2 517 aaPredicted RBP8.82□□□□□ -1
RNU4-39P-201ENST00000362455 IGFLR1Q9H665 355 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms