RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RARAP10276 462 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 ITGA6P23229 1130 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 SPEM2Q0P670 501 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 GRIN2CQ14957 1233 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 NAALADL2Q58DX5 795 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 FAM182BQ5T319 152 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 PEAR1Q5VY43 1037 aaPredicted RBP5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 NXPE4Q6UWF7 544 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 KRT25Q7Z3Z0 450 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 PHF20L1A8MW92 1017 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 NFKB1P19838 968 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 TAF1CQ15572 869 aaPredicted RBP5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 PRPF40BQ6NWY9 871 aaKnown RBP5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 GLIS3Q8NEA6 775 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 ABHD17AQ96GS6 310 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 PNMA5Q96PV4 448 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 SLC30A3Q99726 388 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 PHF24Q9UPV7 400 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 TRAK1Q9UPV9 953 aa5.97□□□□□ -1.45
RNU6-28P-201ENST00000362378 PSAPP07602 524 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 GSTT1P30711 240 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 PLAURQ03405 335 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 ANKRD24Q8TF21 1146 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 SREK1Q8WXA9 508 aaKnown RBP5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 GTPBP3Q969Y2 492 aaKnown RBP5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 LATS2Q9NRM7 1088 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 PPP4R2Q9NY27 417 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 USP35Q9P2H5 1018 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 KANSL3Q9P2N6 904 aa5.96□□□□□ -1.46
RNU6-28P-201ENST00000362378 CD33P20138 364 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 FGFR3P22607 806 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 NRLP54845 237 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 HYAL2Q12891 473 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 COL13A1Q5TAT6 717 aaPredicted RBP5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 MEI1Q5TIA1 1274 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 SLC43A3Q8NBI5 491 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 C3orf58Q8NDZ4 430 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 DRC1Q96MC2 740 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 EHD4Q9H223 541 aa5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 GMPR2Q9P2T1 348 aaKnown RBP5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 DDX41Q9UJV9 622 aaKnown RBP5.95□□□□□ -1.46
RNU6-28P-201ENST00000362378 TMEM238LA0A1B0GVL6 79 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 WFS1O76024 890 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 XRCC5P13010 732 aaKnown RBP5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 NEUROD1Q13562 356 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 DHX32Q7L7V1 743 aaKnown RBP5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 HS2ST1Q7LGA3 356 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 CCNJLQ8IV13 435 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 CEP120Q8N960 986 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 TRPM4Q8TD43 1214 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 BHMTQ93088 406 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 CNTNAP3BQ96NU0 1288 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 TCF12Q99081 682 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 TINF2Q9BSI4 451 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 CNTNAP3Q9BZ76 1288 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 CCSER2Q9H7U1 834 aa5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 SRA1Q9HD15 236 aaKnown RBP5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.94□□□□□ -1.46
RNU6-28P-201ENST00000362378 PPFIA3O75145 1194 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 SNRPBP14678 240 aaKnown RBP5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 SF3A1Q15459 793 aaKnown RBP5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 FOXR1Q6PIV2 292 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 ERMP1Q7Z2K6 904 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 NCAPG2Q86XI2 1143 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 ZNF654Q8IZM8 581 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 NANOS1Q8WY41 292 aaKnown RBP5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 TRERF1Q96PN7 1200 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 ZKSCAN3Q9BRR0 538 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 NOC4LQ9BVI4 516 aaKnown RBP5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 LIN7BQ9HAP6 207 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 ABCB6Q9NP58 842 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 DZANK1Q9NVP4 752 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 GGT7Q9UJ14 662 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 PPM1HQ9ULR3 514 aa5.93□□□□□ -1.46
RNU6-28P-201ENST00000362378 ZBTB42B2RXF5 422 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 NFKBIEO00221 500 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 RACK1P63244 317 aaKnown RBP5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 GPLD1P80108 840 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 CTBSQ01459 385 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 ZNF394Q53GI3 561 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 RAB44Q7Z6P3 723 aaPredicted RBP5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 USP48Q86UV5 1035 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 OSMRQ99650 979 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 BHLHE41Q9C0J9 482 aaPredicted RBP5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 ACBD3Q9H3P7 528 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 ZFYVE1Q9HBF4 777 aa5.92□□□□□ -1.46
RNU6-28P-201ENST00000362378 LOC102724428A0A0B4J2F2 783 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 LOC105371045A0A1W2PR82 267 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 ACPPP15309 386 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 ITPKAP23677 461 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 FCGRTP55899 365 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 SIK1P57059 783 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 MAP3K10Q02779 954 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 PCSK7Q16549 785 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 SV2AQ7L0J3 742 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 VWA5B2Q8N398 1253 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 TMEM102Q8N9M5 508 aaPredicted RBP5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 NSUN5Q96P11 429 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms