RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 NBPF26B4DH59 902 aa18.39■□□□□ 0.54
CNKSR1-201ENST00000361530 NBPF14Q5TI25 921 aa18.39■□□□□ 0.54
CNKSR1-201ENST00000361530 NBPF10Q6P3W6 841 aaKnown RBP18.39■□□□□ 0.54
CNKSR1-201ENST00000361530 NBPF15Q8N660 670 aa18.39■□□□□ 0.54
CNKSR1-201ENST00000361530 SPC24Q8NBT2 197 aa18.39■□□□□ 0.54
CNKSR1-201ENST00000361530 KCNF1Q9H3M0 494 aa18.39■□□□□ 0.53
CNKSR1-201ENST00000361530 AFDNP55196 1824 aaKnown RBP18.39■□□□□ 0.53
CNKSR1-201ENST00000361530 GOLGA6L4A6NEF3 574 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 TIMM10P62072 90 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 ATG9AQ7Z3C6 839 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 LUZP1Q86V48 1076 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 KBTBD3Q8NAB2 608 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 FAM200AQ8TCP9 573 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 HSP90B1P14625 803 aaKnown RBP18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 RESTQ13127 1097 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 NEUROD6Q96NK8 337 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 TNMDQ9H2S6 317 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 COL18A1P39060 1754 aa18.38■□□□□ 0.53
CNKSR1-201ENST00000361530 A0A0G2JLW4 131 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 NR1I2O75469 434 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 SCRN1Q12765 414 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 TTLL7Q6ZT98 887 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 H7C1W4 665 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 GOLIM4O00461 696 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 ARFGEF2Q9Y6D5 1785 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 RFX7Q2KHR2 1363 aa18.37■□□□□ 0.53
CNKSR1-201ENST00000361530 MTERF4Q7Z6M4 381 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-201ENST00000361530 SPTLC3Q9NUV7 552 aa18.36■□□□□ 0.53
CNKSR1-201ENST00000361530 PYCARDQ9ULZ3 195 aa18.36■□□□□ 0.53
CNKSR1-201ENST00000361530 ANO6Q4KMQ2 910 aa18.36■□□□□ 0.53
CNKSR1-201ENST00000361530 ATF3P18847 181 aa18.36■□□□□ 0.53
CNKSR1-201ENST00000361530 CBX8Q9HC52 389 aa18.36■□□□□ 0.53
CNKSR1-201ENST00000361530 CLSTN2Q9H4D0 955 aa18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 H3BQV1 296 aa18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 RBM43Q6ZSC3 357 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 KIAA1524Q8TCG1 905 aa18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 DDX19AQ9NUU7 478 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 PAG1Q9NWQ8 432 aa18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 PRDM4Q9UKN5 801 aa18.35■□□□□ 0.53
CNKSR1-201ENST00000361530 SH3TC1Q8TE82 1336 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 ADAMTSL3P82987 1691 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 FOSBP53539 338 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 MYRIPQ8NFW9 859 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 BICD2Q8TD16 824 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 GLI3P10071 1580 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 CTDNEP1O95476 244 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 A1BGP04217 495 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 APOBRQ0VD83 1088 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 TSC1Q92574 1164 aa18.34■□□□□ 0.53
CNKSR1-201ENST00000361530 PFKFB2O60825 505 aa18.33■□□□□ 0.53
CNKSR1-201ENST00000361530 PPFIA3O75145 1194 aa18.33■□□□□ 0.53
CNKSR1-201ENST00000361530 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.53
CNKSR1-201ENST00000361530 NSUN7Q8NE18 718 aaKnown RBP18.33■□□□□ 0.53
CNKSR1-201ENST00000361530 PRDM10Q9NQV6 1147 aa18.33■□□□□ 0.53
CNKSR1-201ENST00000361530 ADD1P35611 737 aaKnown RBP18.33■□□□□ 0.52
CNKSR1-201ENST00000361530 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 FTOQ9C0B1 505 aaKnown RBP eCLIP18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 CWC25Q9NXE8 425 aaPredicted RBP18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 TMEM94Q12767 1356 aa18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 EXOSC10Q01780 885 aaKnown RBP18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 HELLSQ9NRZ9 838 aa18.32■□□□□ 0.52
CNKSR1-201ENST00000361530 HSPD1P10809 573 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 PTGS1P23219 599 aa18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 CHST3Q7LGC8 479 aa18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 NCOA5Q9HCD5 579 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 DSCC1Q9BVC3 393 aa18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 DNAJC25Q9H1X3 360 aa18.31■□□□□ 0.52
CNKSR1-201ENST00000361530 IL15P40933 162 aaPredicted RBP18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 LLPHQ9BRT6 129 aaKnown RBP18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 ABCC6O95255 1503 aa18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 PTPDC1A2A3K4 754 aa18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 E7EWF7 191 aa18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 GPR108Q9NPR9 543 aa18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 PKD1L3Q7Z443 1732 aa18.3■□□□□ 0.52
CNKSR1-201ENST00000361530 MAST3O60307 1309 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 EYA2O00167 538 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 TTLL5Q6EMB2 1281 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 AGXT2Q9BYV1 514 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 NRBP1Q9UHY1 535 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 CFAP45Q9UL16 551 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 LAMA4Q16363 1823 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 A0A1B0GUL7 405 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 TPM3P06753 285 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 IFIT1P09914 478 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 ZNF165P49910 485 aa18.29■□□□□ 0.52
CNKSR1-201ENST00000361530 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
CNKSR1-201ENST00000361530 TAF7LQ5H9L4 462 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms