RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 USPL1Q5W0Q7 1092 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 LRSAM1Q6UWE0 723 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 ATG9AQ7Z3C6 839 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 UTP14AQ9BVJ6 771 aaKnown RBP24.4■■□□□ 1.5
CBWD3-201ENST00000360171 RBSNQ9H1K0 784 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 TPM2P07951 284 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 TFCP2Q12800 502 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 TTLL11Q8NHH1 800 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 SH3TC1Q8TE82 1336 aa24.4■■□□□ 1.5
CBWD3-201ENST00000360171 ARHGEF1Q92888 912 aaKnown RBP24.39■■□□□ 1.5
CBWD3-201ENST00000360171 PDE8AO60658 829 aa24.39■■□□□ 1.49
CBWD3-201ENST00000360171 LRRC24Q50LG9 513 aa24.39■■□□□ 1.49
CBWD3-201ENST00000360171 AK7Q96M32 723 aa24.39■■□□□ 1.49
CBWD3-201ENST00000360171 TLR7Q9NYK1 1049 aaKnown RBP24.39■■□□□ 1.49
CBWD3-201ENST00000360171 IFIT2P09913 472 aaKnown RBP24.38■■□□□ 1.49
CBWD3-201ENST00000360171 CCDC57Q2TAC2 916 aa24.38■■□□□ 1.49
CBWD3-201ENST00000360171 SLC27A3Q5K4L6 730 aa24.38■■□□□ 1.49
CBWD3-201ENST00000360171 CCDC8Q9H0W5 538 aaPredicted RBP24.38■■□□□ 1.49
CBWD3-201ENST00000360171 GREM2Q9H772 168 aa24.38■■□□□ 1.49
CBWD3-201ENST00000360171 RGL2O15211 777 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 MSNP26038 577 aaKnown RBP24.37■■□□□ 1.49
CBWD3-201ENST00000360171 TBC1D9BQ66K14 1250 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 PUS3Q9BZE2 481 aaKnown RBP24.37■■□□□ 1.49
CBWD3-201ENST00000360171 PHF14O94880 888 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 HCLS1P14317 486 aaPredicted RBP24.37■■□□□ 1.49
CBWD3-201ENST00000360171 PROM2Q8N271 834 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 ANO2Q9NQ90 1003 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 TMEM63CQ9P1W3 806 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 PALD1Q9ULE6 856 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 TTC41PQ6P2S7 1318 aa24.37■■□□□ 1.49
CBWD3-201ENST00000360171 EYA2O00167 538 aa24.36■■□□□ 1.49
CBWD3-201ENST00000360171 RRP9O43818 475 aaKnown RBP24.36■■□□□ 1.49
CBWD3-201ENST00000360171 TNNI3KQ59H18 835 aa24.36■■□□□ 1.49
CBWD3-201ENST00000360171 FPGT-TNNI3KV9GXZ4 949 aa24.36■■□□□ 1.49
CBWD3-201ENST00000360171 SPEF2Q9C093 1822 aa24.36■■□□□ 1.49
CBWD3-201ENST00000360171 TRIM6-TRIM34B2RNG4 842 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 OFD1O75665 1012 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 TERF1P54274 439 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 IFIT5Q13325 482 aaKnown RBP24.35■■□□□ 1.49
CBWD3-201ENST00000360171 NOL7Q9UMY1 257 aaKnown RBP24.35■■□□□ 1.49
CBWD3-201ENST00000360171 LRP5O75197 1615 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 ZPR1O75312 459 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 CIAO1O76071 339 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 ITGA6P23229 1130 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 TXNRD1Q16881 649 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 BICDL1Q6ZP65 573 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 RILPL2Q969X0 211 aa24.35■■□□□ 1.49
CBWD3-201ENST00000360171 IL15P40933 162 aaPredicted RBP24.34■■□□□ 1.49
CBWD3-201ENST00000360171 ECHDC1Q9NTX5 307 aa24.34■■□□□ 1.49
CBWD3-201ENST00000360171 RBM27Q9P2N5 1060 aaKnown RBP24.34■■□□□ 1.49
CBWD3-201ENST00000360171 MAP4K4O95819 1239 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-201ENST00000360171 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.33■■□□□ 1.49
CBWD3-201ENST00000360171 HSPA4P34932 840 aa24.33■■□□□ 1.48
CBWD3-201ENST00000360171 TRAPPC3LQ5T215 181 aa24.33■■□□□ 1.48
CBWD3-201ENST00000360171 ZNF500O60304 480 aaPredicted RBP24.32■■□□□ 1.48
CBWD3-201ENST00000360171 MCM5P33992 734 aa24.32■■□□□ 1.48
CBWD3-201ENST00000360171 SYAP1Q96A49 352 aaPredicted RBP24.32■■□□□ 1.48
CBWD3-201ENST00000360171 GPATCH3Q96I76 525 aa24.32■■□□□ 1.48
CBWD3-201ENST00000360171 DBNLQ9UJU6 430 aaKnown RBP24.32■■□□□ 1.48
CBWD3-201ENST00000360171 ZNF609O15014 1411 aa24.31■■□□□ 1.48
CBWD3-201ENST00000360171 RIC1Q4ADV7 1423 aa24.31■■□□□ 1.48
CBWD3-201ENST00000360171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.31■■□□□ 1.48
CBWD3-201ENST00000360171 ANKRD18BA2A2Z9 1011 aa24.31■■□□□ 1.48
CBWD3-201ENST00000360171 GLRX3O76003 335 aaKnown RBP24.31■■□□□ 1.48
CBWD3-201ENST00000360171 RFC4P35249 363 aa24.31■■□□□ 1.48
CBWD3-201ENST00000360171 TAF7LQ5H9L4 462 aa24.31■■□□□ 1.48
CBWD3-201ENST00000360171 COL4A1P02462 1669 aa24.31■■□□□ 1.48
CBWD3-201ENST00000360171 APBA3O96018 575 aa24.3■■□□□ 1.48
CBWD3-201ENST00000360171 ERFEQ4G0M1 354 aa24.3■■□□□ 1.48
CBWD3-201ENST00000360171 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
CBWD3-201ENST00000360171 PLSCR1O15162 318 aa24.3■■□□□ 1.48
CBWD3-201ENST00000360171 RGPD3A6NKT7 1758 aaPredicted RBP24.3■■□□□ 1.48
CBWD3-201ENST00000360171 RGPD4Q7Z3J3 1758 aa24.3■■□□□ 1.48
CBWD3-201ENST00000360171 SYCE3A1L190 88 aa24.29■■□□□ 1.48
CBWD3-201ENST00000360171 NSFL1CQ9UNZ2 370 aaKnown RBP24.29■■□□□ 1.48
CBWD3-201ENST00000360171 TAF1P21675 1872 aa24.29■■□□□ 1.48
CBWD3-201ENST00000360171 WDR33Q9C0J8 1336 aaKnown RBP24.29■■□□□ 1.48
CBWD3-201ENST00000360171 ABCC12Q96J65 1359 aa24.29■■□□□ 1.48
CBWD3-201ENST00000360171 ADRA2BP18089 450 aa24.29■■□□□ 1.48
CBWD3-201ENST00000360171 DBNDD2Q9BQY9 259 aa24.29■■□□□ 1.48
CBWD3-201ENST00000360171 SETDB2Q96T68 719 aa24.28■■□□□ 1.48
CBWD3-201ENST00000360171 GPR108Q9NPR9 543 aa24.28■■□□□ 1.48
CBWD3-201ENST00000360171 RAD50Q92878 1312 aa24.28■■□□□ 1.48
CBWD3-201ENST00000360171 HSP90AA2PQ14568 343 aaPredicted RBP24.27■■□□□ 1.48
CBWD3-201ENST00000360171 RIPOR2Q9Y4F9 1068 aa24.27■■□□□ 1.48
CBWD3-201ENST00000360171 KIAA1211Q6ZU35 1233 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 C3orf67Q6ZVT6 689 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 SEC31BQ9NQW1 1179 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 RTL9Q8NET4 1388 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 SGSM2O43147 1006 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 LDHAL6AQ6ZMR3 332 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 TMEM87AQ8NBN3 555 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 ZKSCAN5Q9Y2L8 839 aa24.26■■□□□ 1.47
CBWD3-201ENST00000360171 TNRC6CQ9HCJ0 1690 aaKnown RBP24.25■■□□□ 1.47
CBWD3-201ENST00000360171 TIMM10P62072 90 aa24.25■■□□□ 1.47
CBWD3-201ENST00000360171 CNTROBQ8N137 903 aa24.25■■□□□ 1.47
CBWD3-201ENST00000360171 KLHL34Q8N239 644 aa24.25■■□□□ 1.47
CBWD3-201ENST00000360171 CHAMP1Q96JM3 812 aa24.25■■□□□ 1.47
CBWD3-201ENST00000360171 CEP126Q9P2H0 1117 aa24.25■■□□□ 1.47
CBWD3-201ENST00000360171 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms