RNA–Protein interactions for RNA: ENST00000357769.4

THSD4-203, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene THSD4, Length 3,403 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-203ENST00000357769 PGBD1Q96JS3 809 aa11.45□□□□□ -0.58
THSD4-203ENST00000357769 NEK1Q96PY6 1258 aa11.45□□□□□ -0.58
THSD4-203ENST00000357769 SPATA31A3Q5VYP0 1347 aa11.45□□□□□ -0.58
THSD4-203ENST00000357769 BIN1O00499 593 aa11.45□□□□□ -0.58
THSD4-203ENST00000357769 NPHP1O15259 732 aa11.45□□□□□ -0.58
THSD4-203ENST00000357769 PHKG2P15735 406 aa11.45□□□□□ -0.58
THSD4-203ENST00000357769 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.45□□□□□ -0.58
THSD4-203ENST00000357769 ATP6V1DQ9Y5K8 247 aa11.45□□□□□ -0.58
THSD4-203ENST00000357769 V9GYY5 206 aaPredicted RBP11.45□□□□□ -0.58
THSD4-203ENST00000357769 SNAP23O00161 211 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 SCRN1Q12765 414 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 MAP3K11Q16584 847 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 CHMP4CQ96CF2 233 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 MRVI1Q9Y6F6 885 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 LEO1Q8WVC0 666 aaPredicted RBP11.44□□□□□ -0.58
THSD4-203ENST00000357769 METTL22Q9BUU2 404 aaPredicted RBP11.44□□□□□ -0.58
THSD4-203ENST00000357769 CCDC192P0DO97 292 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 ADORA1P30542 326 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 FILIP1Q7Z7B0 1213 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 CBX8Q9HC52 389 aa11.44□□□□□ -0.58
THSD4-203ENST00000357769 ZNF609O15014 1411 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 PSMA5P28066 241 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 CBX1P83916 185 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 HSP90AA4PQ58FG1 418 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 GORABQ5T7V8 394 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 MTX1Q13505 466 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 NBPF10Q6P3W6 841 aaKnown RBP11.43□□□□□ -0.58
THSD4-203ENST00000357769 NBPF15Q8N660 670 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 SH2B1Q9NRF2 756 aaPredicted RBP11.43□□□□□ -0.58
THSD4-203ENST00000357769 ALS2Q96Q42 1657 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 TUBGCP6Q96RT7 1819 aa11.43□□□□□ -0.58
THSD4-203ENST00000357769 SASS6Q6UVJ0 657 aa11.42□□□□□ -0.58
THSD4-203ENST00000357769 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
THSD4-203ENST00000357769 PHRF1Q9P1Y6 1649 aaKnown RBP11.42□□□□□ -0.58
THSD4-203ENST00000357769 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
THSD4-203ENST00000357769 TOM1L2Q6ZVM7 507 aa11.42□□□□□ -0.58
THSD4-203ENST00000357769 TRMT1Q9NXH9 659 aaKnown RBP11.42□□□□□ -0.58
THSD4-203ENST00000357769 C11orf57Q6ZUT1 292 aaPredicted RBP11.42□□□□□ -0.58
THSD4-203ENST00000357769 ZSCAN31Q96LW9 406 aaPredicted RBP11.42□□□□□ -0.58
THSD4-203ENST00000357769 FUCA2Q9BTY2 467 aa11.42□□□□□ -0.58
THSD4-203ENST00000357769 KDM6AO15550 1401 aaPredicted RBP11.41□□□□□ -0.58
THSD4-203ENST00000357769 HOXB7P09629 217 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 CCDC82Q8N4S0 544 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 LRRC37A3O60309 1634 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 MEGF6O75095 1541 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 UBE2Q2LH0YL09 131 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 SNRPA1P09661 255 aaKnown RBP11.41□□□□□ -0.58
THSD4-203ENST00000357769 ME1P48163 572 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 ZNF165P49910 485 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 SCARF1Q14162 830 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 HELBQ8NG08 1087 aaPredicted RBP11.41□□□□□ -0.58
THSD4-203ENST00000357769 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 AIFM3Q96NN9 605 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
THSD4-203ENST00000357769 A0A1B0GVL5 298 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 IFNL2Q8IZJ0 200 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 USP28Q96RU2 1077 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 BABAM1Q9NWV8 329 aa11.41□□□□□ -0.58
THSD4-203ENST00000357769 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
THSD4-203ENST00000357769 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.58
THSD4-203ENST00000357769 CCDC144BQ3MJ40 725 aa11.4□□□□□ -0.58
THSD4-203ENST00000357769 PIBF1Q8WXW3 757 aa11.4□□□□□ -0.58
THSD4-203ENST00000357769 M0R2C6 588 aa11.4□□□□□ -0.58
THSD4-203ENST00000357769 IFIT1P09914 478 aaKnown RBP11.4□□□□□ -0.58
THSD4-203ENST00000357769 HS1BP3Q53T59 392 aa11.4□□□□□ -0.58
THSD4-203ENST00000357769 GTF3C6Q969F1 213 aa11.4□□□□□ -0.58
THSD4-203ENST00000357769 PAG1Q9NWQ8 432 aa11.4□□□□□ -0.58
THSD4-203ENST00000357769 RGPD5Q99666 1765 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 A0A1B0GUL7 405 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.59
THSD4-203ENST00000357769 MCMDC2Q4G0Z9 681 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 TMEM87AQ8NBN3 555 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 MYL10Q9BUA6 226 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 PDCL3Q9H2J4 239 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 PRDM11Q9NQV5 511 aa11.4□□□□□ -0.59
THSD4-203ENST00000357769 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.59
THSD4-203ENST00000357769 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
THSD4-203ENST00000357769 APPP05067 770 aa11.39□□□□□ -0.59
THSD4-203ENST00000357769 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
THSD4-203ENST00000357769 CCAR1Q8IX12 1150 aaKnown RBP11.39□□□□□ -0.59
THSD4-203ENST00000357769 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
THSD4-203ENST00000357769 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
THSD4-203ENST00000357769 USP42Q9H9J4 1324 aaKnown RBP11.39□□□□□ -0.59
THSD4-203ENST00000357769 CTDNEP1O95476 244 aa11.39□□□□□ -0.59
THSD4-203ENST00000357769 FAM200AQ8TCP9 573 aa11.39□□□□□ -0.59
THSD4-203ENST00000357769 PODXL2Q9NZ53 605 aa11.39□□□□□ -0.59
THSD4-203ENST00000357769 MED23Q9ULK4 1368 aa11.38□□□□□ -0.59
THSD4-203ENST00000357769 USP27XA6NNY8 438 aa11.38□□□□□ -0.59
THSD4-203ENST00000357769 MARCKSP29966 332 aaPredicted RBP11.38□□□□□ -0.59
THSD4-203ENST00000357769 OSBP2Q969R2 916 aa11.38□□□□□ -0.59
THSD4-203ENST00000357769 TM6SF1Q9BZW5 370 aa11.38□□□□□ -0.59
THSD4-203ENST00000357769 ATP2B1P20020 1258 aa11.38□□□□□ -0.59
THSD4-203ENST00000357769 IQSEC3Q9UPP2 1182 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms