RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 WASHC4Q2M389 1173 aa21.4■■□□□ 1.02
PDLIM7-201ENST00000355572 BEND3Q5T5X7 828 aa21.4■■□□□ 1.02
PDLIM7-201ENST00000355572 CDCA7LQ96GN5 454 aa21.4■■□□□ 1.02
PDLIM7-201ENST00000355572 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
PDLIM7-201ENST00000355572 ZBTB12Q9Y330 459 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-201ENST00000355572 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
PDLIM7-201ENST00000355572 LINS1Q8NG48 757 aa21.39■■□□□ 1.01
PDLIM7-201ENST00000355572 PSMD14O00487 310 aa21.38■■□□□ 1.01
PDLIM7-201ENST00000355572 ECE2O60344 883 aa21.38■■□□□ 1.01
PDLIM7-201ENST00000355572 FAM161AQ3B820 660 aa21.38■■□□□ 1.01
PDLIM7-201ENST00000355572 CNTROBQ8N137 903 aa21.38■■□□□ 1.01
PDLIM7-201ENST00000355572 TRPM4Q8TD43 1214 aa21.38■■□□□ 1.01
PDLIM7-201ENST00000355572 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
PDLIM7-201ENST00000355572 UFL1O94874 794 aa21.37■■□□□ 1.01
PDLIM7-201ENST00000355572 LMOD1P29536 600 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-201ENST00000355572 EPHA10Q5JZY3 1008 aa21.37■■□□□ 1.01
PDLIM7-201ENST00000355572 PNMA8AQ86V59 439 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-201ENST00000355572 ANKRD18AQ8IVF6 992 aa21.37■■□□□ 1.01
PDLIM7-201ENST00000355572 MKRN1Q9UHC7 482 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-201ENST00000355572 TRAF5O00463 557 aa21.36■■□□□ 1.01
PDLIM7-201ENST00000355572 EGFRP00533 1210 aa21.36■■□□□ 1.01
PDLIM7-201ENST00000355572 CREBZFQ9NS37 354 aa21.36■■□□□ 1.01
PDLIM7-201ENST00000355572 CSF1RP07333 972 aa21.35■■□□□ 1.01
PDLIM7-201ENST00000355572 FOXO4P98177 505 aa21.35■■□□□ 1.01
PDLIM7-201ENST00000355572 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
PDLIM7-201ENST00000355572 ANKIB1Q9P2G1 1089 aa21.35■■□□□ 1.01
PDLIM7-201ENST00000355572 MINPP1Q9UNW1 487 aa21.35■■□□□ 1.01
PDLIM7-201ENST00000355572 HSP90B1P14625 803 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-201ENST00000355572 DLK2Q6UY11 383 aa21.34■■□□□ 1.01
PDLIM7-201ENST00000355572 USP50Q70EL3 339 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-201ENST00000355572 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-201ENST00000355572 ADARB2Q9NS39 739 aaKnown RBP21.34■■□□□ 1.01
PDLIM7-201ENST00000355572 GGA1Q9UJY5 639 aa21.34■■□□□ 1.01
PDLIM7-201ENST00000355572 XDHP47989 1333 aa21.33■■□□□ 1.01
PDLIM7-201ENST00000355572 ITGA6P23229 1130 aa21.33■■□□□ 1.01
PDLIM7-201ENST00000355572 KLRK1P26718 216 aa21.33■■□□□ 1.01
PDLIM7-201ENST00000355572 TXNRD3Q86VQ6 643 aa21.33■■□□□ 1.01
PDLIM7-201ENST00000355572 CNOT7Q9UIV1 285 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-201ENST00000355572 TNIP1Q15025 636 aa21.32■■□□□ 1
PDLIM7-201ENST00000355572 MICALL2Q8IY33 904 aa21.32■■□□□ 1
PDLIM7-201ENST00000355572 CDC5LQ99459 802 aaKnown RBP21.32■■□□□ 1
PDLIM7-201ENST00000355572 EYA3Q99504 573 aa21.32■■□□□ 1
PDLIM7-201ENST00000355572 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
PDLIM7-201ENST00000355572 BSDC1Q9NW68 430 aaPredicted RBP21.32■■□□□ 1
PDLIM7-201ENST00000355572 CNTNAP1P78357 1384 aa21.32■■□□□ 1
PDLIM7-201ENST00000355572 SNAP23O00161 211 aa21.31■■□□□ 1
PDLIM7-201ENST00000355572 SAMD7Q7Z3H4 446 aa21.31■■□□□ 1
PDLIM7-201ENST00000355572 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
PDLIM7-201ENST00000355572 TMEM88BA6NKF7 163 aa21.3■■□□□ 1
PDLIM7-201ENST00000355572 TRMT2AQ8IZ69 625 aaKnown RBP21.3■■□□□ 1
PDLIM7-201ENST00000355572 KAZALD1Q96I82 304 aa21.3■■□□□ 1
PDLIM7-201ENST00000355572 GLIS2Q9BZE0 524 aaPredicted RBP21.3■■□□□ 1
PDLIM7-201ENST00000355572 ZC3H12CQ9C0D7 883 aaKnown RBP21.3■■□□□ 1
PDLIM7-201ENST00000355572 E9PSI1 815 aa21.29■■□□□ 1
PDLIM7-201ENST00000355572 CCER2I3L3R5 266 aa21.29■■□□□ 1
PDLIM7-201ENST00000355572 CST9Q5W186 159 aa21.29■■□□□ 1
PDLIM7-201ENST00000355572 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
PDLIM7-201ENST00000355572 PGAP2Q9UHJ9 254 aa21.29■■□□□ 1
PDLIM7-201ENST00000355572 PCNTO95613 3336 aa21.29■■□□□ 1
PDLIM7-201ENST00000355572 ASTN2O75129 1339 aaPredicted RBP21.29■■□□□ 1
PDLIM7-201ENST00000355572 GRM8O00222 908 aa21.28■■□□□ 1
PDLIM7-201ENST00000355572 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
PDLIM7-201ENST00000355572 ATP2B4P23634 1241 aa21.28■■□□□ 1
PDLIM7-201ENST00000355572 CCT4P50991 539 aaKnown RBP21.28■■□□□ 1
PDLIM7-201ENST00000355572 TBC1D10BQ4KMP7 808 aaPredicted RBP21.28■■□□□ 1
PDLIM7-201ENST00000355572 ZNF594Q96JF6 807 aaPredicted RBP21.28■■□□□ 1
PDLIM7-201ENST00000355572 MXD3Q9BW11 206 aa21.28■■□□□ 1
PDLIM7-201ENST00000355572 IRS2Q9Y4H2 1338 aa21.28■■□□□ 1
PDLIM7-201ENST00000355572 MED23Q9ULK4 1368 aa21.27■■□□□ 1
PDLIM7-201ENST00000355572 THSD7BQ9C0I4 1608 aa21.27■■□□□ 1
PDLIM7-201ENST00000355572 DPF2Q92785 391 aa21.27■■□□□ 1
PDLIM7-201ENST00000355572 SUCLG2Q96I99 432 aa21.27■■□□□ 1
PDLIM7-201ENST00000355572 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-201ENST00000355572 HSPA1AP0DMV8 641 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-201ENST00000355572 HSPA1BP0DMV9 641 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-201ENST00000355572 VEGFBP49765 207 aa21.26■□□□□ 0.99
PDLIM7-201ENST00000355572 LMBR1LQ6UX01 489 aa21.26■□□□□ 0.99
PDLIM7-201ENST00000355572 HELBQ8NG08 1087 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-201ENST00000355572 ZNF609O15014 1411 aa21.25■□□□□ 0.99
PDLIM7-201ENST00000355572 IGHMBP2P38935 993 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-201ENST00000355572 CHRNDQ07001 517 aa21.25■□□□□ 0.99
PDLIM7-201ENST00000355572 GMLQ99445 158 aa21.25■□□□□ 0.99
PDLIM7-201ENST00000355572 TAF5LO75529 589 aa21.24■□□□□ 0.99
PDLIM7-201ENST00000355572 ALDH1L1O75891 902 aa21.24■□□□□ 0.99
PDLIM7-201ENST00000355572 RBM26Q5T8P6 1007 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-201ENST00000355572 SRCIN1Q9C0H9 1055 aa21.24■□□□□ 0.99
PDLIM7-201ENST00000355572 RASSF10A6NK89 507 aa21.23■□□□□ 0.99
PDLIM7-201ENST00000355572 RSBN1LQ6PCB5 846 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-201ENST00000355572 MIER1Q8N108 512 aa21.23■□□□□ 0.99
PDLIM7-201ENST00000355572 CHMP3Q9Y3E7 222 aa21.23■□□□□ 0.99
PDLIM7-201ENST00000355572 ANKRD18BA2A2Z9 1011 aa21.22■□□□□ 0.99
PDLIM7-201ENST00000355572 H7C1D1 291 aa21.22■□□□□ 0.99
PDLIM7-201ENST00000355572 RPS12P25398 132 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-201ENST00000355572 COL13A1Q5TAT6 717 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-201ENST00000355572 ZNF804BA4D1E1 1349 aa21.22■□□□□ 0.99
PDLIM7-201ENST00000355572 UTYO14607 1347 aa21.22■□□□□ 0.99
PDLIM7-201ENST00000355572 G3V3G9 751 aa21.21■□□□□ 0.99
PDLIM7-201ENST00000355572 DCAF8Q5TAQ9 597 aa21.21■□□□□ 0.99
PDLIM7-201ENST00000355572 USP48Q86UV5 1035 aa21.21■□□□□ 0.99
PDLIM7-201ENST00000355572 MPHOSPH8Q99549 860 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms