RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 ANKRD44Q8N8A2 993 aa9.14□□□□□ -0.95
C11orf54-202ENST00000354421 CPSF1Q10570 1443 aaKnown RBP9.13□□□□□ -0.95
C11orf54-202ENST00000354421 RIMS2Q9UQ26 1411 aa9.13□□□□□ -0.95
C11orf54-202ENST00000354421 UQCRHLA0A096LP55 91 aa9.13□□□□□ -0.95
C11orf54-202ENST00000354421 PRPF40AO75400 957 aaKnown RBP9.13□□□□□ -0.95
C11orf54-202ENST00000354421 UQCRHP07919 91 aa9.13□□□□□ -0.95
C11orf54-202ENST00000354421 SRPK2P78362 688 aaKnown RBP9.13□□□□□ -0.95
C11orf54-202ENST00000354421 RBM10P98175 930 aaKnown RBP9.13□□□□□ -0.95
C11orf54-202ENST00000354421 CASC1Q6TDU7 716 aa9.13□□□□□ -0.95
C11orf54-202ENST00000354421 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
C11orf54-202ENST00000354421 FOXO3O43524 673 aa9.12□□□□□ -0.95
C11orf54-202ENST00000354421 REC8O95072 547 aa9.12□□□□□ -0.95
C11orf54-202ENST00000354421 LMOD3Q0VAK6 560 aa9.12□□□□□ -0.95
C11orf54-202ENST00000354421 RPAP2Q8IXW5 612 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-202ENST00000354421 SMAP1Q8IYB5 467 aaPredicted RBP9.12□□□□□ -0.95
C11orf54-202ENST00000354421 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.12□□□□□ -0.95
C11orf54-202ENST00000354421 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
C11orf54-202ENST00000354421 TMEM63CQ9P1W3 806 aa9.12□□□□□ -0.95
C11orf54-202ENST00000354421 PRDM4Q9UKN5 801 aa9.12□□□□□ -0.95
C11orf54-202ENST00000354421 C10orf71Q711Q0 1435 aa9.12□□□□□ -0.95
C11orf54-202ENST00000354421 PKP1Q13835 747 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 TWISTNBQ3B726 338 aaPredicted RBP9.11□□□□□ -0.95
C11orf54-202ENST00000354421 CABLES1Q8TDN4 633 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 POLKQ9UBT6 870 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 MKRN1Q9UHC7 482 aaKnown RBP9.11□□□□□ -0.95
C11orf54-202ENST00000354421 YTHDC2Q9H6S0 1430 aaKnown RBP9.11□□□□□ -0.95
C11orf54-202ENST00000354421 SDSP20132 328 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 MLLT3P42568 568 aaPredicted RBP9.11□□□□□ -0.95
C11orf54-202ENST00000354421 MCM2P49736 904 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 CUL4AQ13619 759 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 TXNRD1Q16881 649 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 ZGPATQ8N5A5 531 aaKnown RBP9.11□□□□□ -0.95
C11orf54-202ENST00000354421 PHACTR3Q96KR7 559 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 AK9Q5TCS8 1911 aa9.11□□□□□ -0.95
C11orf54-202ENST00000354421 ATP7BP35670 1465 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 SPATA31A1Q5TZJ5 1347 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 ABCA3Q99758 1704 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 ERC2O15083 957 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 BRD1O95696 1058 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 SLC10A3P09131 477 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 ESCO1Q5FWF5 840 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 C8orf58Q8NAV2 365 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 OSBPL3Q9H4L5 887 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 FAM13BQ9NYF5 915 aa9.1□□□□□ -0.95
C11orf54-202ENST00000354421 IL13P35225 146 aa9.09□□□□□ -0.95
C11orf54-202ENST00000354421 RPIAP49247 311 aa9.09□□□□□ -0.95
C11orf54-202ENST00000354421 UVSSAQ2YD98 709 aa9.09□□□□□ -0.95
C11orf54-202ENST00000354421 CRIPAKQ8N1N5 446 aa9.09□□□□□ -0.95
C11orf54-202ENST00000354421 IL17RAQ96F46 866 aa9.09□□□□□ -0.95
C11orf54-202ENST00000354421 THUMPD2Q9BTF0 503 aaKnown RBP9.09□□□□□ -0.95
C11orf54-202ENST00000354421 TSPY26PQ9H489 355 aa9.09□□□□□ -0.95
C11orf54-202ENST00000354421 NALCNQ8IZF0 1738 aa9.09□□□□□ -0.95
C11orf54-202ENST00000354421 XRN1Q8IZH2 1706 aaKnown RBP9.09□□□□□ -0.95
C11orf54-202ENST00000354421 PXDNLA1KZ92 1463 aa9.09□□□□□ -0.96
C11orf54-202ENST00000354421 SYCE3A1L190 88 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 OATP04181 439 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 SAFB2Q14151 953 aaKnown RBP eCLIP9.08□□□□□ -0.96
C11orf54-202ENST00000354421 CEP85Q6P2H3 762 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 SCUBE3Q8IX30 993 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 SYAP1Q96A49 352 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-202ENST00000354421 INTS4Q96HW7 963 aaKnown RBP9.08□□□□□ -0.96
C11orf54-202ENST00000354421 MINK1Q8N4C8 1332 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-202ENST00000354421 MYRIPQ8NFW9 859 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 OTUD7AQ8TE49 926 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-202ENST00000354421 PRAM1Q96QH2 718 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 CDK19Q9BWU1 502 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 SLC52A1Q9NWF4 448 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 STK26Q9P289 416 aa9.08□□□□□ -0.96
C11orf54-202ENST00000354421 NSFL1CQ9UNZ2 370 aaKnown RBP9.08□□□□□ -0.96
C11orf54-202ENST00000354421 RTL1A6NKG5 1358 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 COL24A1Q17RW2 1714 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 DLG5Q8TDM6 1919 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 KIAA2012Q0VF49 1180 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 TMX3Q96JJ7 454 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 PRIMPOLQ96LW4 560 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 SPSB2Q99619 263 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 MCOLN1Q9GZU1 580 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 KIAA0232Q92628 1395 aa9.07□□□□□ -0.96
C11orf54-202ENST00000354421 MAP2P11137 1827 aaKnown RBP9.06□□□□□ -0.96
C11orf54-202ENST00000354421 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
C11orf54-202ENST00000354421 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 HMOX1P09601 288 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 GTF2F1P35269 517 aaKnown RBP eCLIP9.06□□□□□ -0.96
C11orf54-202ENST00000354421 ANAPC15P60006 121 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 PLA2G2CQ5R387 149 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 FAM184AQ8NB25 1140 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 CCDC94Q9BW85 323 aaPredicted RBP9.06□□□□□ -0.96
C11orf54-202ENST00000354421 CABP1Q9NZU7 370 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 PKD2L1Q9P0L9 805 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.06□□□□□ -0.96
C11orf54-202ENST00000354421 PTPRCP08575 1304 aa9.06□□□□□ -0.96
C11orf54-202ENST00000354421 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
C11orf54-202ENST00000354421 UTP14CQ5TAP6 766 aaKnown RBP9.05□□□□□ -0.96
C11orf54-202ENST00000354421 NBPF15Q8N660 670 aa9.05□□□□□ -0.96
C11orf54-202ENST00000354421 TMEM87AQ8NBN3 555 aa9.05□□□□□ -0.96
C11orf54-202ENST00000354421 CD2APQ9Y5K6 639 aa9.05□□□□□ -0.96
C11orf54-202ENST00000354421 EDC4Q6P2E9 1401 aaKnown RBP9.05□□□□□ -0.96
C11orf54-202ENST00000354421 SSH2Q76I76 1423 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms