RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 TMEM87AQ8NBN3 555 aa28.25■■■□□ 2.11
USP25-203ENST00000351097 TM6SF1Q9BZW5 370 aa28.25■■■□□ 2.11
USP25-203ENST00000351097 FBXO3Q9UK99 471 aa28.25■■■□□ 2.11
USP25-203ENST00000351097 ZNF609O15014 1411 aa28.24■■■□□ 2.11
USP25-203ENST00000351097 NEUROD6Q96NK8 337 aa28.24■■■□□ 2.11
USP25-203ENST00000351097 ZSCAN22P10073 491 aaPredicted RBP28.24■■■□□ 2.11
USP25-203ENST00000351097 IFIT5Q13325 482 aaKnown RBP28.24■■■□□ 2.11
USP25-203ENST00000351097 TTLL11Q8NHH1 800 aa28.24■■■□□ 2.11
USP25-203ENST00000351097 SNRKQ9NRH2 765 aa28.24■■■□□ 2.11
USP25-203ENST00000351097 IRS4O14654 1257 aaPredicted RBP28.23■■■□□ 2.11
USP25-203ENST00000351097 PHF14O94880 888 aa28.23■■■□□ 2.11
USP25-203ENST00000351097 MSNP26038 577 aaKnown RBP28.23■■■□□ 2.11
USP25-203ENST00000351097 VPS53Q5VIR6 699 aa28.23■■■□□ 2.11
USP25-203ENST00000351097 HAUS7Q99871 368 aa28.23■■■□□ 2.11
USP25-203ENST00000351097 GDPD2Q9HCC8 539 aa28.23■■■□□ 2.11
USP25-203ENST00000351097 SMC3Q9UQE7 1217 aa28.23■■■□□ 2.11
USP25-203ENST00000351097 NDUFB9Q9Y6M9 179 aa28.23■■■□□ 2.11
USP25-203ENST00000351097 GADD45BO75293 160 aaPredicted RBP28.23■■■□□ 2.11
USP25-203ENST00000351097 PRPF40BQ6NWY9 871 aaKnown RBP28.23■■■□□ 2.11
USP25-203ENST00000351097 CCDC171Q6TFL3 1326 aa28.22■■■□□ 2.11
USP25-203ENST00000351097 A0A0D9SFI3 127 aa28.22■■■□□ 2.11
USP25-203ENST00000351097 STX6O43752 255 aa28.22■■■□□ 2.11
USP25-203ENST00000351097 CTSWP56202 376 aa28.22■■■□□ 2.11
USP25-203ENST00000351097 CERKQ8TCT0 537 aa28.22■■■□□ 2.11
USP25-203ENST00000351097 JAKMIP1Q96N16 626 aaKnown RBP28.22■■■□□ 2.11
USP25-203ENST00000351097 ZSWIM6Q9HCJ5 1215 aa28.22■■■□□ 2.11
USP25-203ENST00000351097 TSPY26PQ9H489 355 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 PDRG1Q9NUG6 133 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 CEP126Q9P2H0 1117 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 MYH14Q7Z406 1995 aaKnown RBP28.21■■■□□ 2.11
USP25-203ENST00000351097 A0A1B0GUL7 405 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 CPA1P15085 419 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 SYT1P21579 422 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 DNAJC2Q99543 621 aaKnown RBP28.21■■■□□ 2.11
USP25-203ENST00000351097 LARP6Q9BRS8 491 aaKnown RBP28.21■■■□□ 2.11
USP25-203ENST00000351097 GREM2Q9H772 168 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 CYP46A1Q9Y6A2 500 aa28.21■■■□□ 2.11
USP25-203ENST00000351097 CAMTA2O94983 1202 aa28.2■■■□□ 2.11
USP25-203ENST00000351097 NECTIN1Q15223 517 aa28.2■■■□□ 2.11
USP25-203ENST00000351097 ZSCAN31Q96LW9 406 aaPredicted RBP28.2■■■□□ 2.11
USP25-203ENST00000351097 TAF7LQ5H9L4 462 aa28.2■■■□□ 2.1
USP25-203ENST00000351097 ITGA6P23229 1130 aa28.19■■■□□ 2.1
USP25-203ENST00000351097 ADCK5Q3MIX3 580 aa28.19■■■□□ 2.1
USP25-203ENST00000351097 SH2B1Q9NRF2 756 aaPredicted RBP28.19■■■□□ 2.1
USP25-203ENST00000351097 PDE8AO60658 829 aa28.18■■■□□ 2.1
USP25-203ENST00000351097 ZKSCAN1P17029 563 aaPredicted RBP28.18■■■□□ 2.1
USP25-203ENST00000351097 MED23Q9ULK4 1368 aa28.18■■■□□ 2.1
USP25-203ENST00000351097 LARGE1O95461 756 aa28.18■■■□□ 2.1
USP25-203ENST00000351097 PTF1AQ7RTS3 328 aa28.18■■■□□ 2.1
USP25-203ENST00000351097 ATP6V1DQ9Y5K8 247 aa28.18■■■□□ 2.1
USP25-203ENST00000351097 RFX7Q2KHR2 1363 aa28.18■■■□□ 2.1
USP25-203ENST00000351097 COL5A3P25940 1745 aaPredicted RBP28.18■■■□□ 2.1
USP25-203ENST00000351097 THSD7AQ9UPZ6 1657 aa28.17■■■□□ 2.1
USP25-203ENST00000351097 SUSD4Q5VX71 490 aa28.17■■■□□ 2.1
USP25-203ENST00000351097 NOL7Q9UMY1 257 aaKnown RBP28.17■■■□□ 2.1
USP25-203ENST00000351097 RBM8AQ9Y5S9 174 aaKnown RBP28.17■■■□□ 2.1
USP25-203ENST00000351097 F13A1P00488 732 aa28.17■■■□□ 2.1
USP25-203ENST00000351097 CNPY2Q9Y2B0 182 aa28.17■■■□□ 2.1
USP25-203ENST00000351097 ZNF831Q5JPB2 1677 aa28.17■■■□□ 2.1
USP25-203ENST00000351097 DDX46Q7L014 1031 aaKnown RBP28.16■■■□□ 2.1
USP25-203ENST00000351097 CCDC83Q8IWF9 413 aa28.16■■■□□ 2.1
USP25-203ENST00000351097 RNF214Q8ND24 703 aa28.16■■■□□ 2.1
USP25-203ENST00000351097 MAP4K1Q92918 833 aa28.16■■■□□ 2.1
USP25-203ENST00000351097 CREB3L3Q68CJ9 461 aa28.16■■■□□ 2.1
USP25-203ENST00000351097 LINC00116Q8NCU8 138 aa28.16■■■□□ 2.1
USP25-203ENST00000351097 ANKRD18BA2A2Z9 1011 aa28.15■■■□□ 2.1
USP25-203ENST00000351097 AKAP2Q9Y2D5 859 aa28.15■■■□□ 2.1
USP25-203ENST00000351097 RIPOR2Q9Y4F9 1068 aa28.15■■■□□ 2.1
USP25-203ENST00000351097 RIC1Q4ADV7 1423 aa28.14■■■□□ 2.1
USP25-203ENST00000351097 KCNJ4P48050 445 aa28.14■■■□□ 2.1
USP25-203ENST00000351097 ZNF589Q86UQ0 364 aaPredicted RBP28.14■■■□□ 2.1
USP25-203ENST00000351097 GJB2P29033 226 aa28.14■■■□□ 2.09
USP25-203ENST00000351097 LDHAL6AQ6ZMR3 332 aa28.14■■■□□ 2.09
USP25-203ENST00000351097 KBTBD3Q8NAB2 608 aa28.14■■■□□ 2.09
USP25-203ENST00000351097 MYH3P11055 1940 aa28.14■■■□□ 2.09
USP25-203ENST00000351097 HSPA1LP34931 641 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 AK7Q96M32 723 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 SH3TC1Q8TE82 1336 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 TCHHQ07283 1943 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 CHGBP05060 677 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 KCNQ4P56696 695 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 UBE2HP62256 183 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 PARP10Q53GL7 1025 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 CCDC183Q5T5S1 534 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 PAG1Q9NWQ8 432 aa28.13■■■□□ 2.09
USP25-203ENST00000351097 MEX3CQ5U5Q3 659 aaKnown RBP28.12■■■□□ 2.09
USP25-203ENST00000351097 UTP14AQ9BVJ6 771 aaKnown RBP28.12■■■□□ 2.09
USP25-203ENST00000351097 GOLIM4O00461 696 aa28.11■■■□□ 2.09
USP25-203ENST00000351097 PSMA5P28066 241 aa28.11■■■□□ 2.09
USP25-203ENST00000351097 ADORA1P30542 326 aa28.11■■■□□ 2.09
USP25-203ENST00000351097 IFIT1P09914 478 aaKnown RBP28.11■■■□□ 2.09
USP25-203ENST00000351097 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.11■■■□□ 2.09
USP25-203ENST00000351097 XAGE2Q96GT9 111 aa28.11■■■□□ 2.09
USP25-203ENST00000351097 CCDC39Q9UFE4 941 aa28.11■■■□□ 2.09
USP25-203ENST00000351097 MTMR6Q9Y217 621 aa28.11■■■□□ 2.09
USP25-203ENST00000351097 FAM177BA6PVY3 158 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 SLC27A2O14975 620 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 METTL24Q5JXM2 366 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 FAM182BQ5T319 152 aa28.1■■■□□ 2.09
USP25-203ENST00000351097 GJD4Q96KN9 370 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms