RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 AKT1S1Q96B36 256 aa22.68■■□□□ 1.22
PTN-201ENST00000348225 TFCP2L1Q9NZI6 479 aa22.68■■□□□ 1.22
PTN-201ENST00000348225 PDE8BO95263 885 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 CCDC158Q5M9N0 1113 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 GORABQ5T7V8 394 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 VGLL2Q8N8G2 317 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 FLAD1Q8NFF5 587 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 RUFY2Q8WXA3 655 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 HAUS7Q99871 368 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 DIAPH3Q9NSV4 1193 aa22.67■■□□□ 1.22
PTN-201ENST00000348225 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.66■■□□□ 1.22
PTN-201ENST00000348225 USP26Q9BXU7 913 aa22.66■■□□□ 1.22
PTN-201ENST00000348225 ZNF827Q17R98 1081 aa22.65■■□□□ 1.22
PTN-201ENST00000348225 ANKRD18AQ8IVF6 992 aa22.65■■□□□ 1.22
PTN-201ENST00000348225 CNBD1Q8NA66 436 aa22.65■■□□□ 1.22
PTN-201ENST00000348225 XAGE2Q96GT9 111 aa22.65■■□□□ 1.22
PTN-201ENST00000348225 RFX7Q2KHR2 1363 aa22.65■■□□□ 1.22
PTN-201ENST00000348225 PUM3Q15397 648 aaKnown RBP22.64■■□□□ 1.22
PTN-201ENST00000348225 C3orf67Q6ZVT6 689 aa22.64■■□□□ 1.22
PTN-201ENST00000348225 FSD1Q9BTV5 496 aa22.64■■□□□ 1.22
PTN-201ENST00000348225 DAXXQ9UER7 740 aaPredicted RBP22.64■■□□□ 1.22
PTN-201ENST00000348225 ARAP2Q8WZ64 1704 aa22.64■■□□□ 1.21
PTN-201ENST00000348225 EPB41L2O43491 1005 aaKnown RBP22.64■■□□□ 1.21
PTN-201ENST00000348225 TTC39AQ5SRH9 613 aa22.64■■□□□ 1.21
PTN-201ENST00000348225 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
PTN-201ENST00000348225 BECN1Q14457 450 aa22.63■■□□□ 1.21
PTN-201ENST00000348225 DNAJC2Q99543 621 aaKnown RBP22.63■■□□□ 1.21
PTN-201ENST00000348225 SGSM2O43147 1006 aa22.62■■□□□ 1.21
PTN-201ENST00000348225 TICAM2Q86XR7 235 aa22.62■■□□□ 1.21
PTN-201ENST00000348225 LPIN2Q92539 896 aa22.62■■□□□ 1.21
PTN-201ENST00000348225 ANO2Q9NQ90 1003 aa22.62■■□□□ 1.21
PTN-201ENST00000348225 TM4SF1P30408 202 aa22.61■■□□□ 1.21
PTN-201ENST00000348225 ADORA1P30542 326 aa22.61■■□□□ 1.21
PTN-201ENST00000348225 ST5P78524 1137 aa22.61■■□□□ 1.21
PTN-201ENST00000348225 TNRC6CQ9HCJ0 1690 aaKnown RBP22.61■■□□□ 1.21
PTN-201ENST00000348225 SLC5A1P13866 664 aa22.6■■□□□ 1.21
PTN-201ENST00000348225 MCCP23508 829 aa22.6■■□□□ 1.21
PTN-201ENST00000348225 CWC27Q6UX04 472 aaKnown RBP22.6■■□□□ 1.21
PTN-201ENST00000348225 BSDC1Q9NW68 430 aaPredicted RBP22.6■■□□□ 1.21
PTN-201ENST00000348225 RAD50Q92878 1312 aa22.6■■□□□ 1.21
PTN-201ENST00000348225 SERPINB2P05120 415 aa22.6■■□□□ 1.21
PTN-201ENST00000348225 FGFR2P21802 821 aa22.6■■□□□ 1.21
PTN-201ENST00000348225 PRR5LQ6MZQ0 368 aa22.6■■□□□ 1.21
PTN-201ENST00000348225 PAG1Q9NWQ8 432 aa22.6■■□□□ 1.21
PTN-201ENST00000348225 MSH5O43196 834 aa22.59■■□□□ 1.21
PTN-201ENST00000348225 KIAA1211Q6ZU35 1233 aa22.59■■□□□ 1.21
PTN-201ENST00000348225 DDX46Q7L014 1031 aaKnown RBP22.59■■□□□ 1.21
PTN-201ENST00000348225 NLGN1Q8N2Q7 840 aa22.59■■□□□ 1.21
PTN-201ENST00000348225 ZNF512BQ96KM6 892 aaPredicted RBP22.59■■□□□ 1.21
PTN-201ENST00000348225 A0A1B0GUL6 1792 aa22.58■■□□□ 1.21
PTN-201ENST00000348225 CHRNDQ07001 517 aa22.58■■□□□ 1.21
PTN-201ENST00000348225 COL23A1Q86Y22 540 aaPredicted RBP22.58■■□□□ 1.21
PTN-201ENST00000348225 CCDC24Q8N4L8 307 aa22.58■■□□□ 1.21
PTN-201ENST00000348225 HELBQ8NG08 1087 aaPredicted RBP22.58■■□□□ 1.21
PTN-201ENST00000348225 SF3B2Q13435 895 aaKnown RBP22.57■■□□□ 1.2
PTN-201ENST00000348225 KBTBD3Q8NAB2 608 aa22.57■■□□□ 1.2
PTN-201ENST00000348225 EDC3Q96F86 508 aaKnown RBP22.57■■□□□ 1.2
PTN-201ENST00000348225 COL4A1P02462 1669 aa22.57■■□□□ 1.2
PTN-201ENST00000348225 GOLIM4O00461 696 aa22.57■■□□□ 1.2
PTN-201ENST00000348225 UQCRFS1P1P0C7P4 283 aa22.57■■□□□ 1.2
PTN-201ENST00000348225 RPS8P62241 208 aaKnown RBP22.57■■□□□ 1.2
PTN-201ENST00000348225 CELF1Q92879 486 aaKnown RBP22.57■■□□□ 1.2
PTN-201ENST00000348225 CAMKK2Q96RR4 588 aa22.57■■□□□ 1.2
PTN-201ENST00000348225 TAF1P21675 1872 aa22.56■■□□□ 1.2
PTN-201ENST00000348225 POLRMTO00411 1230 aaKnown RBP22.56■■□□□ 1.2
PTN-201ENST00000348225 NMIQ13287 307 aaPredicted RBP22.56■■□□□ 1.2
PTN-201ENST00000348225 KIF2CQ99661 725 aa22.56■■□□□ 1.2
PTN-201ENST00000348225 NDUFB9Q9Y6M9 179 aa22.56■■□□□ 1.2
PTN-201ENST00000348225 TAF5LO75529 589 aa22.55■■□□□ 1.2
PTN-201ENST00000348225 EN1Q05925 392 aaPredicted RBP22.55■■□□□ 1.2
PTN-201ENST00000348225 DDR1Q08345 913 aa22.55■■□□□ 1.2
PTN-201ENST00000348225 EZH2Q15910 746 aaKnown RBP22.55■■□□□ 1.2
PTN-201ENST00000348225 LRRFIP1Q32MZ4 808 aaKnown RBP22.55■■□□□ 1.2
PTN-201ENST00000348225 IL25Q9H293 177 aa22.55■■□□□ 1.2
PTN-201ENST00000348225 PNPLA7Q6ZV29 1317 aa22.54■■□□□ 1.2
PTN-201ENST00000348225 SNRKQ9NRH2 765 aa22.54■■□□□ 1.2
PTN-201ENST00000348225 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
PTN-201ENST00000348225 BAG6P46379 1132 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 FKBP4Q02790 459 aaKnown RBP eCLIP22.53■■□□□ 1.2
PTN-201ENST00000348225 RABEP1Q15276 862 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 CCDC102BQ68D86 513 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 FAM227BQ96M60 508 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 STK32BQ9NY57 414 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 MINPP1Q9UNW1 487 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 ARID4AP29374 1257 aaPredicted RBP22.53■■□□□ 1.2
PTN-201ENST00000348225 ANAPC15P60006 121 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 ERICH6Q7L0X2 663 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 RPGRQ92834 1020 aaKnown RBP22.53■■□□□ 1.2
PTN-201ENST00000348225 ANKRD2Q9GZV1 360 aa22.53■■□□□ 1.2
PTN-201ENST00000348225 LSG1Q9H089 658 aaKnown RBP22.53■■□□□ 1.2
PTN-201ENST00000348225 GRAPQ13588 217 aa22.52■■□□□ 1.2
PTN-201ENST00000348225 UBE4AQ14139 1066 aa22.52■■□□□ 1.2
PTN-201ENST00000348225 GRAPLQ8TC17 118 aaPredicted RBP22.52■■□□□ 1.2
PTN-201ENST00000348225 MED23Q9ULK4 1368 aa22.52■■□□□ 1.2
PTN-201ENST00000348225 NRXN2Q9P2S2 1712 aa22.51■■□□□ 1.19
PTN-201ENST00000348225 AKAP11Q9UKA4 1901 aa22.51■■□□□ 1.19
PTN-201ENST00000348225 A0A0D9SFI3 127 aa22.51■■□□□ 1.19
PTN-201ENST00000348225 PHKA1P46020 1223 aa22.51■■□□□ 1.19
PTN-201ENST00000348225 SLC15A2Q16348 729 aa22.51■■□□□ 1.19
PTN-201ENST00000348225 CRY2Q49AN0 593 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms