RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 LIMCH1Q9UPQ0 1083 aa22.29■■□□□ 1.16
ATRIP-202ENST00000346691 CYP46A1Q9Y6A2 500 aa22.29■■□□□ 1.16
ATRIP-202ENST00000346691 ZNF34Q8IZ26 560 aa22.28■■□□□ 1.16
ATRIP-202ENST00000346691 XAGE2Q96GT9 111 aa22.28■■□□□ 1.16
ATRIP-202ENST00000346691 PALLDQ8WX93 1383 aa22.28■■□□□ 1.16
ATRIP-202ENST00000346691 RPAP1Q9BWH6 1393 aaPredicted RBP22.28■■□□□ 1.16
ATRIP-202ENST00000346691 ERVV-1B6SEH8 477 aa22.28■■□□□ 1.16
ATRIP-202ENST00000346691 SCARF1Q14162 830 aa22.28■■□□□ 1.16
ATRIP-202ENST00000346691 PTF1AQ7RTS3 328 aa22.28■■□□□ 1.16
ATRIP-202ENST00000346691 TM6SF1Q9BZW5 370 aa22.27■■□□□ 1.16
ATRIP-202ENST00000346691 BRD1O95696 1058 aa22.27■■□□□ 1.16
ATRIP-202ENST00000346691 FOXD4L6Q3SYB3 417 aaPredicted RBP22.26■■□□□ 1.15
ATRIP-202ENST00000346691 MCMDC2Q4G0Z9 681 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 VPS53Q5VIR6 699 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 SUSD4Q5VX71 490 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 PI16Q6UXB8 463 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 FOXD4L3Q6VB84 417 aaPredicted RBP22.26■■□□□ 1.15
ATRIP-202ENST00000346691 LDHAL6AQ6ZMR3 332 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 NGLY1Q96IV0 654 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 RIPOR2Q9Y4F9 1068 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 HCLS1P14317 486 aaPredicted RBP22.26■■□□□ 1.15
ATRIP-202ENST00000346691 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
ATRIP-202ENST00000346691 ST3GAL1Q11201 340 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 LMBRD1Q9NUN5 540 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 BCL9LQ86UU0 1499 aa22.26■■□□□ 1.15
ATRIP-202ENST00000346691 RFX7Q2KHR2 1363 aa22.25■■□□□ 1.15
ATRIP-202ENST00000346691 GOLGA6L22H0YM25 854 aa22.25■■□□□ 1.15
ATRIP-202ENST00000346691 CCDC83Q8IWF9 413 aa22.25■■□□□ 1.15
ATRIP-202ENST00000346691 METTL24Q5JXM2 366 aa22.25■■□□□ 1.15
ATRIP-202ENST00000346691 GORABQ5T7V8 394 aa22.25■■□□□ 1.15
ATRIP-202ENST00000346691 SMIM5Q71RC9 77 aa22.25■■□□□ 1.15
ATRIP-202ENST00000346691 NECAB1Q8N987 351 aa22.24■■□□□ 1.15
ATRIP-202ENST00000346691 A0A0G2JLW4 131 aa22.24■■□□□ 1.15
ATRIP-202ENST00000346691 ANKRD18BA2A2Z9 1011 aa22.24■■□□□ 1.15
ATRIP-202ENST00000346691 CAMTA2O94983 1202 aa22.24■■□□□ 1.15
ATRIP-202ENST00000346691 ME3Q16798 604 aa22.24■■□□□ 1.15
ATRIP-202ENST00000346691 TTC39AQ5SRH9 613 aa22.24■■□□□ 1.15
ATRIP-202ENST00000346691 USPL1Q5W0Q7 1092 aa22.24■■□□□ 1.15
ATRIP-202ENST00000346691 PDE8AO60658 829 aa22.23■■□□□ 1.15
ATRIP-202ENST00000346691 PRPF40AO75400 957 aaKnown RBP22.23■■□□□ 1.15
ATRIP-202ENST00000346691 CNNM1Q9NRU3 951 aa22.23■■□□□ 1.15
ATRIP-202ENST00000346691 TPCN1Q9ULQ1 816 aa22.23■■□□□ 1.15
ATRIP-202ENST00000346691 DDX49Q9Y6V7 483 aaKnown RBP22.23■■□□□ 1.15
ATRIP-202ENST00000346691 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 RREB1Q92766 1687 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 ATP2B3Q16720 1220 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 RNF20Q5VTR2 975 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 PANK2Q9BZ23 570 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 AKAP2Q9Y2D5 859 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 CCDC158Q5M9N0 1113 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 FAM182BQ5T319 152 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 HELBQ8NG08 1087 aaPredicted RBP22.22■■□□□ 1.15
ATRIP-202ENST00000346691 FBXO3Q9UK99 471 aa22.22■■□□□ 1.15
ATRIP-202ENST00000346691 CYP21A2P08686 494 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 ZAP70P43403 619 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 SKOR2Q2VWA4 1001 aaPredicted RBP22.21■■□□□ 1.15
ATRIP-202ENST00000346691 ZMYM1Q5SVZ6 1142 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 BLOC1S2Q6QNY1 142 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 M0R2C6 588 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 RPS6KB1P23443 525 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 VGLL2Q8N8G2 317 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 MAST3O60307 1309 aa22.21■■□□□ 1.15
ATRIP-202ENST00000346691 PSMA5P28066 241 aa22.2■■□□□ 1.14
ATRIP-202ENST00000346691 TOB2Q14106 344 aaPredicted RBP22.2■■□□□ 1.14
ATRIP-202ENST00000346691 GAS2L3Q86XJ1 694 aa22.2■■□□□ 1.14
ATRIP-202ENST00000346691 LINC00116Q8NCU8 138 aa22.2■■□□□ 1.14
ATRIP-202ENST00000346691 SNAP23O00161 211 aa22.19■■□□□ 1.14
ATRIP-202ENST00000346691 RNF113AO15541 343 aaKnown RBP22.19■■□□□ 1.14
ATRIP-202ENST00000346691 NCLP19338 710 aaKnown RBP22.19■■□□□ 1.14
ATRIP-202ENST00000346691 PTMSP20962 102 aa22.19■■□□□ 1.14
ATRIP-202ENST00000346691 VPS72Q15906 364 aa22.19■■□□□ 1.14
ATRIP-202ENST00000346691 SEC31BQ9NQW1 1179 aa22.19■■□□□ 1.14
ATRIP-202ENST00000346691 COL5A3P25940 1745 aaPredicted RBP22.19■■□□□ 1.14
ATRIP-202ENST00000346691 STOX1Q6ZVD7 989 aa22.19■■□□□ 1.14
ATRIP-202ENST00000346691 OSBP2Q969R2 916 aa22.19■■□□□ 1.14
ATRIP-202ENST00000346691 HMG20BQ9P0W2 317 aa22.19■■□□□ 1.14
ATRIP-202ENST00000346691 KLHL40Q2TBA0 621 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 TSGA10IPQ3SY00 556 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 GPT2Q8TD30 523 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 HELLSQ9NRZ9 838 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 NSFL1CQ9UNZ2 370 aaKnown RBP22.18■■□□□ 1.14
ATRIP-202ENST00000346691 SMC3Q9UQE7 1217 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 NIP7Q9Y221 180 aaKnown RBP eCLIP22.18■■□□□ 1.14
ATRIP-202ENST00000346691 U3KPZ7 1027 aaPredicted RBP22.18■■□□□ 1.14
ATRIP-202ENST00000346691 MCAMP43121 646 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 MRE11P49959 708 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.18■■□□□ 1.14
ATRIP-202ENST00000346691 DDX60Q8IY21 1712 aaKnown RBP22.18■■□□□ 1.14
ATRIP-202ENST00000346691 SPEF2Q9C093 1822 aa22.18■■□□□ 1.14
ATRIP-202ENST00000346691 GJB2P29033 226 aa22.17■■□□□ 1.14
ATRIP-202ENST00000346691 CLCN1P35523 988 aa22.17■■□□□ 1.14
ATRIP-202ENST00000346691 UTP14AQ9BVJ6 771 aaKnown RBP22.17■■□□□ 1.14
ATRIP-202ENST00000346691 GDPD2Q9HCC8 539 aa22.17■■□□□ 1.14
ATRIP-202ENST00000346691 SYT1P21579 422 aa22.17■■□□□ 1.14
ATRIP-202ENST00000346691 LRRC2Q9BYS8 371 aa22.17■■□□□ 1.14
ATRIP-202ENST00000346691 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.17■■□□□ 1.14
ATRIP-202ENST00000346691 AKAP11Q9UKA4 1901 aa22.17■■□□□ 1.14
ATRIP-202ENST00000346691 CICQ96RK0 1608 aaPredicted RBP22.16■■□□□ 1.14
ATRIP-202ENST00000346691 COL4A1P02462 1669 aa22.16■■□□□ 1.14
ATRIP-202ENST00000346691 RBM27Q9P2N5 1060 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms