RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SPATA31A3Q5VYP0 1347 aa15.7■□□□□ 0.1
CASC4-202ENST00000345795 GOLGA6L19H0YKK7 550 aa15.7■□□□□ 0.1
CASC4-202ENST00000345795 PES1O00541 588 aaKnown RBP15.7■□□□□ 0.1
CASC4-202ENST00000345795 PDIA6Q15084 440 aa15.7■□□□□ 0.1
CASC4-202ENST00000345795 STK38Q15208 465 aa15.7■□□□□ 0.1
CASC4-202ENST00000345795 IMMTQ16891 758 aaKnown RBP15.7■□□□□ 0.1
CASC4-202ENST00000345795 IGHMBP2P38935 993 aaKnown RBP15.7■□□□□ 0.1
CASC4-202ENST00000345795 TTC41PQ6P2S7 1318 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 NAPBQ9H115 298 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 ZDHHC9Q9Y397 364 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
CASC4-202ENST00000345795 HOXB7P09629 217 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 MARCKSP29966 332 aaPredicted RBP15.69■□□□□ 0.1
CASC4-202ENST00000345795 IL15P40933 162 aaPredicted RBP15.69■□□□□ 0.1
CASC4-202ENST00000345795 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
CASC4-202ENST00000345795 TFCP2L1Q9NZI6 479 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 F13A1P00488 732 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 ATP2B2Q01814 1243 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 POLA2Q14181 598 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 DACT1Q9NYF0 836 aa15.69■□□□□ 0.1
CASC4-202ENST00000345795 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
CASC4-202ENST00000345795 AKAP17AQ02040 695 aaKnown RBP15.68■□□□□ 0.1
CASC4-202ENST00000345795 MAGEB6Q8N7X4 407 aa15.68■□□□□ 0.1
CASC4-202ENST00000345795 PDILTQ8N807 584 aa15.68■□□□□ 0.1
CASC4-202ENST00000345795 AK9Q5TCS8 1911 aa15.68■□□□□ 0.1
CASC4-202ENST00000345795 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
CASC4-202ENST00000345795 TRIM29Q14134 588 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 SCARF1Q14162 830 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 C1orf167Q5SNV9 1468 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 WDR17Q8IZU2 1322 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 ANKIB1Q9P2G1 1089 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 PPP1R1BQ9UD71 204 aaPredicted RBP15.67■□□□□ 0.1
CASC4-202ENST00000345795 RGS12O14924 1447 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.17e-14■■□□□ 14.2
CASC4-202ENST00000345795 TECPR2O15040 1411 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 B4E1Z4 1266 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 CYP21A2P08686 494 aa15.67■□□□□ 0.1
CASC4-202ENST00000345795 CSPP1Q1MSJ5 1256 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.66■□□□□ 0.1
CASC4-202ENST00000345795 PDCP20941 246 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 PHKA1P46020 1223 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 PHKBQ93100 1093 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 NUP62CLQ9H1M0 184 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 OSBPL3Q9H4L5 887 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 ARMT1Q9H993 441 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 STAP2Q9UGK3 403 aa15.66■□□□□ 0.1
CASC4-202ENST00000345795 IFT172Q9UG01 1749 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 ERICH2A1L162 156 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 BCAMP50895 628 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 NRKQ7Z2Y5 1582 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 IFIT3O14879 490 aaKnown RBP15.65■□□□□ 0.1
CASC4-202ENST00000345795 CTDSPL2Q05D32 466 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 SPECC1Q5M775 1068 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 CPLX2Q6PUV4 134 aaKnown RBP15.65■□□□□ 0.1
CASC4-202ENST00000345795 ORC3Q9UBD5 711 aaPredicted RBP15.65■□□□□ 0.1
CASC4-202ENST00000345795 AKAP2Q9Y2D5 859 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 KINO60870 393 aaKnown RBP15.65■□□□□ 0.1
CASC4-202ENST00000345795 TCIRG1Q13488 830 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 LRRFIP1Q32MZ4 808 aaKnown RBP15.65■□□□□ 0.1
CASC4-202ENST00000345795 KIF3AQ9Y496 699 aa15.65■□□□□ 0.1
CASC4-202ENST00000345795 GNPATO15228 680 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 ZPR1O75312 459 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 GYG1P46976 350 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 ANAPC15P60006 121 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 ANKRD1Q15327 319 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 GPAA1O43292 621 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 PRC1O43663 620 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 C8orf76Q96K31 380 aa15.64■□□□□ 0.09
CASC4-202ENST00000345795 ZSCAN31Q96LW9 406 aaPredicted RBP15.64■□□□□ 0.09
CASC4-202ENST00000345795 NBPF5PQ86XG9 351 aaPredicted RBP15.63■□□□□ 0.09
CASC4-202ENST00000345795 KBTBD3Q8NAB2 608 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 GPR101Q96P66 508 aaPredicted RBP15.63■□□□□ 0.09
CASC4-202ENST00000345795 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 LUZP1Q86V48 1076 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 CCDC191Q8NCU4 936 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 UIMC1Q96RL1 719 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 CCDC69A6NI79 296 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 MBD4O95243 580 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 RPS6KB1P23443 525 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 DENND2AQ9ULE3 1009 aa15.63■□□□□ 0.09
CASC4-202ENST00000345795 RNF113AO15541 343 aaKnown RBP15.62■□□□□ 0.09
CASC4-202ENST00000345795 SDR42E1Q8WUS8 393 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 OSBP2Q969R2 916 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 PUS7LQ9H0K6 701 aaKnown RBP15.62■□□□□ 0.09
CASC4-202ENST00000345795 ATG3Q9NT62 314 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 BRD1O95696 1058 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 PTPN21Q16825 1174 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 SLC26A6Q9BXS9 759 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 WTIPA6NIX2 430 aaPredicted RBP15.62■□□□□ 0.09
CASC4-202ENST00000345795 CYP7A1P22680 504 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 CCDC173Q0VFZ6 552 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 KRT32Q14532 448 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 TMEM67Q5HYA8 995 aa15.62■□□□□ 0.09
CASC4-202ENST00000345795 SH2B1Q9NRF2 756 aaPredicted RBP15.62■□□□□ 0.09
CASC4-202ENST00000345795 ADCY5O95622 1261 aa15.61■□□□□ 0.09
CASC4-202ENST00000345795 FAM177A1Q8N128 213 aaPredicted RBP15.61■□□□□ 0.09
CASC4-202ENST00000345795 AIFM3Q96NN9 605 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms